RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 C17orf107Q6ZR85 190 aa17.37■□□□□ 0.37
SHCBP1-205ENST00000566016 LRRTM1Q86UE6 522 aa17.37■□□□□ 0.37
SHCBP1-205ENST00000566016 TBC1D15Q8TC07 691 aa17.37■□□□□ 0.37
SHCBP1-205ENST00000566016 FOXRED1Q96CU9 486 aaPredicted RBP17.37■□□□□ 0.37
SHCBP1-205ENST00000566016 WDFY2Q96P53 400 aa17.37■□□□□ 0.37
SHCBP1-205ENST00000566016 SIRPDQ9H106 197 aa17.37■□□□□ 0.37
SHCBP1-205ENST00000566016 SLITRK2Q9H156 845 aa17.37■□□□□ 0.37
SHCBP1-205ENST00000566016 ELL3Q9HB65 397 aaPredicted RBP17.37■□□□□ 0.37
SHCBP1-205ENST00000566016 CDRT1O95170 752 aa17.37■□□□□ 0.37
SHCBP1-205ENST00000566016 OR2H2O95918 312 aa17.37■□□□□ 0.37
SHCBP1-205ENST00000566016 IFNA2P01563 188 aa17.37■□□□□ 0.37
SHCBP1-205ENST00000566016 CD37P11049 281 aa17.37■□□□□ 0.37
SHCBP1-205ENST00000566016 PSMB9P28065 219 aa17.37■□□□□ 0.37
SHCBP1-205ENST00000566016 DUSP1P28562 367 aa17.37■□□□□ 0.37
SHCBP1-205ENST00000566016 C1orf122Q6ZSJ8 110 aa17.37■□□□□ 0.37
SHCBP1-205ENST00000566016 CMTM4Q8IZR5 234 aa17.37■□□□□ 0.37
SHCBP1-205ENST00000566016 PPP1R35Q8TAP8 253 aa17.37■□□□□ 0.37
SHCBP1-205ENST00000566016 NKX3-1Q99801 234 aaPredicted RBP17.37■□□□□ 0.37
SHCBP1-205ENST00000566016 TMEM82A0PJX8 343 aa17.36■□□□□ 0.37
SHCBP1-205ENST00000566016 CSN2P05814 226 aa17.36■□□□□ 0.37
SHCBP1-205ENST00000566016 CALCBP10092 127 aa17.36■□□□□ 0.37
SHCBP1-205ENST00000566016 RPL31P62899 125 aaKnown RBP17.36■□□□□ 0.37
SHCBP1-205ENST00000566016 KLF17Q5JT82 389 aaPredicted RBP17.36■□□□□ 0.37
SHCBP1-205ENST00000566016 SYT6Q5T7P8 510 aaPredicted RBP17.36■□□□□ 0.37
SHCBP1-205ENST00000566016 LINC00596Q86U02 117 aa17.36■□□□□ 0.37
SHCBP1-205ENST00000566016 MUL1Q969V5 352 aa17.36■□□□□ 0.37
SHCBP1-205ENST00000566016 MRPS24Q96EL2 167 aaKnown RBP17.36■□□□□ 0.37
SHCBP1-205ENST00000566016 ZNF696Q9H7X3 374 aa17.36■□□□□ 0.37
SHCBP1-205ENST00000566016 GHRLQ9UBU3 117 aa17.36■□□□□ 0.37
SHCBP1-205ENST00000566016 MRPS28Q9Y2Q9 187 aaKnown RBP17.36■□□□□ 0.37
SHCBP1-205ENST00000566016 A0A1W2PQ09 198 aa17.35■□□□□ 0.37
SHCBP1-205ENST00000566016 M0R1W7 72 aa17.35■□□□□ 0.37
SHCBP1-205ENST00000566016 PSPNO60542 156 aa17.35■□□□□ 0.37
SHCBP1-205ENST00000566016 TOX4O94842 621 aa17.35■□□□□ 0.37
SHCBP1-205ENST00000566016 CSTBP04080 98 aaKnown RBP17.35■□□□□ 0.37
SHCBP1-205ENST00000566016 EPHA1P21709 976 aa17.35■□□□□ 0.37
SHCBP1-205ENST00000566016 SNU13P55769 128 aaKnown RBP17.35■□□□□ 0.37
SHCBP1-205ENST00000566016 KIAA2026Q5HYC2 2103 aa17.35■□□□□ 0.37
SHCBP1-205ENST00000566016 GLT8D1Q68CQ7 371 aa17.35■□□□□ 0.37
SHCBP1-205ENST00000566016 Q6P435 159 aa17.35■□□□□ 0.37
SHCBP1-205ENST00000566016 GDPD3Q7L5L3 318 aa17.35■□□□□ 0.37
SHCBP1-205ENST00000566016 OSR2Q8N2R0 312 aa17.35■□□□□ 0.37
SHCBP1-205ENST00000566016 OR4D6Q8NGJ1 314 aa17.35■□□□□ 0.37
SHCBP1-205ENST00000566016 C1orf147Q96MC9 270 aaPredicted RBP17.35■□□□□ 0.37
SHCBP1-205ENST00000566016 IFT22Q9H7X7 185 aa17.35■□□□□ 0.37
SHCBP1-205ENST00000566016 UNKLQ9H9P5 680 aaKnown RBP17.35■□□□□ 0.37
SHCBP1-205ENST00000566016 C19orf12Q9NSK7 152 aa17.35■□□□□ 0.37
SHCBP1-205ENST00000566016 NUP50Q9UKX7 468 aa17.35■□□□□ 0.37
SHCBP1-205ENST00000566016 A0A087WXM4 84 aa17.34■□□□□ 0.37
SHCBP1-205ENST00000566016 TRDV1A0A1B0GX56 115 aa17.34■□□□□ 0.37
SHCBP1-205ENST00000566016 A0A1W2PPH5 198 aa17.34■□□□□ 0.37
SHCBP1-205ENST00000566016 MGST3O14880 152 aa17.34■□□□□ 0.37
SHCBP1-205ENST00000566016 HTR3BO95264 441 aa17.34■□□□□ 0.37
SHCBP1-205ENST00000566016 GTF2F2P13984 249 aa17.34■□□□□ 0.37
SHCBP1-205ENST00000566016 GABRR1P24046 479 aa17.34■□□□□ 0.37
SHCBP1-205ENST00000566016 CALRP27797 417 aaKnown RBP17.34■□□□□ 0.37
SHCBP1-205ENST00000566016 OR3A1P47881 315 aa17.34■□□□□ 0.37
SHCBP1-205ENST00000566016 RBM11P57052 281 aaKnown RBP17.34■□□□□ 0.37
SHCBP1-205ENST00000566016 ARF6P62330 175 aa17.34■□□□□ 0.37
SHCBP1-205ENST00000566016 PDCD1Q15116 288 aa17.34■□□□□ 0.37
SHCBP1-205ENST00000566016 C1orf100Q5SVJ3 147 aa17.34■□□□□ 0.37
SHCBP1-205ENST00000566016 AWAT2Q6E213 333 aa17.34■□□□□ 0.37
SHCBP1-205ENST00000566016 OR10K1Q8NGX5 313 aa17.34■□□□□ 0.37
SHCBP1-205ENST00000566016 TBX15Q96SF7 602 aa17.34■□□□□ 0.37
SHCBP1-205ENST00000566016 PCGF1Q9BSM1 259 aa17.34■□□□□ 0.37
SHCBP1-205ENST00000566016 ONECUT1Q9UBC0 465 aa17.34■□□□□ 0.37
SHCBP1-205ENST00000566016 ING4Q9UNL4 249 aa17.34■□□□□ 0.37
SHCBP1-205ENST00000566016 TRAV40A0A0B4J280 105 aa17.33■□□□□ 0.37
SHCBP1-205ENST00000566016 UBBP0CG47 229 aa17.33■□□□□ 0.37
SHCBP1-205ENST00000566016 ZNF44P15621 663 aa17.33■□□□□ 0.37
SHCBP1-205ENST00000566016 ERP29P30040 261 aaKnown RBP17.33■□□□□ 0.37
SHCBP1-205ENST00000566016 BPIFB3P59826 476 aa17.33■□□□□ 0.37
SHCBP1-205ENST00000566016 MEF2CQ06413 473 aaPredicted RBP17.33■□□□□ 0.37
SHCBP1-205ENST00000566016 GRK1Q15835 563 aa17.33■□□□□ 0.37
SHCBP1-205ENST00000566016 KRTAP21-3Q3LHN1 58 aa17.33■□□□□ 0.37
SHCBP1-205ENST00000566016 SLC22A6Q4U2R8 563 aa17.33■□□□□ 0.37
SHCBP1-205ENST00000566016 METAP1DQ6UB28 335 aaPredicted RBP17.33■□□□□ 0.37
SHCBP1-205ENST00000566016 GLIPR1L1Q6UWM5 242 aa17.33■□□□□ 0.37
SHCBP1-205ENST00000566016 PRIMA1Q86XR5 153 aa17.33■□□□□ 0.37
SHCBP1-205ENST00000566016 TSPAN14Q8NG11 270 aa17.33■□□□□ 0.37
SHCBP1-205ENST00000566016 ST3GAL6Q9Y274 331 aa17.33■□□□□ 0.37
SHCBP1-205ENST00000566016 A0A0G2JK05 382 aa17.32■□□□□ 0.36
SHCBP1-205ENST00000566016 SIRPB1O00241 398 aa17.32■□□□□ 0.36
SHCBP1-205ENST00000566016 SLC33A1O00400 549 aaPredicted RBP17.32■□□□□ 0.36
SHCBP1-205ENST00000566016 SERPINA2P20848 420 aa17.32■□□□□ 0.36
SHCBP1-205ENST00000566016 MPV17LQ2QL34 196 aa17.32■□□□□ 0.36
SHCBP1-205ENST00000566016 TUSC1Q2TAM9 212 aa17.32■□□□□ 0.36
SHCBP1-205ENST00000566016 PIGYQ3MUY2 71 aa17.32■□□□□ 0.36
SHCBP1-205ENST00000566016 C9orf139Q6ZV77 190 aa17.32■□□□□ 0.36
SHCBP1-205ENST00000566016 FAM185AQ8N0U4 392 aa17.32■□□□□ 0.36
SHCBP1-205ENST00000566016 OR4S1Q8NGB4 309 aa17.32■□□□□ 0.36
SHCBP1-205ENST00000566016 CHST6Q9GZX3 395 aa17.32■□□□□ 0.36
SHCBP1-205ENST00000566016 METTL8Q9H825 291 aaKnown RBP17.32■□□□□ 0.36
SHCBP1-205ENST00000566016 VCX3AQ9NNX9 186 aa17.32■□□□□ 0.36
SHCBP1-205ENST00000566016 TRAV1-2A0A0B4J238 106 aa17.31■□□□□ 0.36
SHCBP1-205ENST00000566016 DEGS1O15121 323 aa17.31■□□□□ 0.36
SHCBP1-205ENST00000566016 SLC22A1O15245 554 aa17.31■□□□□ 0.36
SHCBP1-205ENST00000566016 FGF9P31371 208 aaPredicted RBP17.31■□□□□ 0.36
SHCBP1-205ENST00000566016 PAX5Q02548 391 aa17.31■□□□□ 0.36
SHCBP1-205ENST00000566016 BLMHQ13867 455 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms