RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 CEACAM19Q7Z692 300 aa11.38□□□□□ -0.59
HERPUD1-210ENST00000565966 KIR3DL3Q8N743 410 aa11.38□□□□□ -0.59
HERPUD1-210ENST00000565966 SIGLECL1Q8N7X8 197 aa11.38□□□□□ -0.59
HERPUD1-210ENST00000565966 TMEM203Q969S6 136 aa11.38□□□□□ -0.59
HERPUD1-210ENST00000565966 FAM234AQ9H0X4 552 aa11.38□□□□□ -0.59
HERPUD1-210ENST00000565966 GSTK1Q9Y2Q3 226 aa11.38□□□□□ -0.59
HERPUD1-210ENST00000565966 TMEM82A0PJX8 343 aa11.37□□□□□ -0.59
HERPUD1-210ENST00000565966 K7N7A8 449 aa11.37□□□□□ -0.59
HERPUD1-210ENST00000565966 TK1P04183 234 aa11.37□□□□□ -0.59
HERPUD1-210ENST00000565966 UCHL1P09936 223 aa11.37□□□□□ -0.59
HERPUD1-210ENST00000565966 TRAM1Q15629 374 aa11.37□□□□□ -0.59
HERPUD1-210ENST00000565966 SSX1Q16384 188 aa11.37□□□□□ -0.59
HERPUD1-210ENST00000565966 UBE2UQ5VVX9 321 aa11.37□□□□□ -0.59
HERPUD1-210ENST00000565966 ELP2Q6IA86 826 aa11.37□□□□□ -0.59
HERPUD1-210ENST00000565966 ZNF773Q6PK81 442 aa11.37□□□□□ -0.59
HERPUD1-210ENST00000565966 BRD3OSQ6XYD6 125 aa11.37□□□□□ -0.59
HERPUD1-210ENST00000565966 TMEM91Q6ZNR0 172 aa11.37□□□□□ -0.59
HERPUD1-210ENST00000565966 VMO1Q7Z5L0 202 aa11.37□□□□□ -0.59
HERPUD1-210ENST00000565966 LYPD6Q86Y78 171 aa11.37□□□□□ -0.59
HERPUD1-210ENST00000565966 ZDHHC22Q8N966 263 aa11.37□□□□□ -0.59
HERPUD1-210ENST00000565966 ASCC1Q8N9N2 400 aaKnown RBP11.37□□□□□ -0.59
HERPUD1-210ENST00000565966 Q8NFD4 153 aa11.37□□□□□ -0.59
HERPUD1-210ENST00000565966 LHX4Q969G2 390 aa11.37□□□□□ -0.59
HERPUD1-210ENST00000565966 SNX22Q96L94 193 aa11.37□□□□□ -0.59
HERPUD1-210ENST00000565966 ZNF48Q96MX3 618 aaPredicted RBP11.37□□□□□ -0.59
HERPUD1-210ENST00000565966 FAM192AQ9GZU8 254 aa11.37□□□□□ -0.59
HERPUD1-210ENST00000565966 PPIL3Q9H2H8 161 aaKnown RBP11.37□□□□□ -0.59
HERPUD1-210ENST00000565966 ESM1Q9NQ30 184 aa11.37□□□□□ -0.59
HERPUD1-210ENST00000565966 ING4Q9UNL4 249 aa11.37□□□□□ -0.59
HERPUD1-210ENST00000565966 M0R1W7 72 aa11.36□□□□□ -0.59
HERPUD1-210ENST00000565966 SH2D1BO14796 132 aa11.36□□□□□ -0.59
HERPUD1-210ENST00000565966 PSPNO60542 156 aa11.36□□□□□ -0.59
HERPUD1-210ENST00000565966 CDRT1O95170 752 aa11.36□□□□□ -0.59
HERPUD1-210ENST00000565966 PSMA1P25786 263 aaKnown RBP11.36□□□□□ -0.59
HERPUD1-210ENST00000565966 GABRA5P31644 462 aa11.36□□□□□ -0.59
HERPUD1-210ENST00000565966 MTNR1BP49286 362 aa11.36□□□□□ -0.59
HERPUD1-210ENST00000565966 RPL31P62899 125 aaKnown RBP11.36□□□□□ -0.59
HERPUD1-210ENST00000565966 FABP5Q01469 135 aa11.36□□□□□ -0.59
HERPUD1-210ENST00000565966 BLMHQ13867 455 aa11.36□□□□□ -0.59
HERPUD1-210ENST00000565966 RSU1Q15404 277 aa11.36□□□□□ -0.59
HERPUD1-210ENST00000565966 KCTD21Q4G0X4 260 aa11.36□□□□□ -0.59
HERPUD1-210ENST00000565966 HSD17B12Q53GQ0 312 aa11.36□□□□□ -0.59
HERPUD1-210ENST00000565966 Q6P435 159 aa11.36□□□□□ -0.59
HERPUD1-210ENST00000565966 METAP1DQ6UB28 335 aaPredicted RBP11.36□□□□□ -0.59
HERPUD1-210ENST00000565966 C17orf107Q6ZR85 190 aa11.36□□□□□ -0.59
HERPUD1-210ENST00000565966 LRRTM1Q86UE6 522 aa11.36□□□□□ -0.59
HERPUD1-210ENST00000565966 CDH26Q8IXH8 852 aa11.36□□□□□ -0.59
HERPUD1-210ENST00000565966 JAGN1Q8N5M9 183 aa11.36□□□□□ -0.59
HERPUD1-210ENST00000565966 Q8N7P7 452 aa11.36□□□□□ -0.59
HERPUD1-210ENST00000565966 OR10K1Q8NGX5 313 aa11.36□□□□□ -0.59
HERPUD1-210ENST00000565966 TBC1D15Q8TC07 691 aa11.36□□□□□ -0.59
HERPUD1-210ENST00000565966 FAM216AQ8WUB2 273 aa11.36□□□□□ -0.59
HERPUD1-210ENST00000565966 MUL1Q969V5 352 aa11.36□□□□□ -0.59
HERPUD1-210ENST00000565966 METTL9Q9H1A3 318 aa11.36□□□□□ -0.59
HERPUD1-210ENST00000565966 TCF7L1Q9HCS4 588 aa11.36□□□□□ -0.59
HERPUD1-210ENST00000565966 EXOSC4Q9NPD3 245 aaKnown RBP11.36□□□□□ -0.59
HERPUD1-210ENST00000565966 C19orf12Q9NSK7 152 aa11.36□□□□□ -0.59
HERPUD1-210ENST00000565966 IL36GQ9NZH8 169 aa11.36□□□□□ -0.59
HERPUD1-210ENST00000565966 GLS2Q9UI32 602 aa11.36□□□□□ -0.59
HERPUD1-210ENST00000565966 SOX21Q9Y651 276 aaPredicted RBP11.36□□□□□ -0.59
HERPUD1-210ENST00000565966 IGHV1-69DA0A0B4J2H0 117 aa11.35□□□□□ -0.59
HERPUD1-210ENST00000565966 A0A1W2PPH5 198 aa11.35□□□□□ -0.59
HERPUD1-210ENST00000565966 MEGF11A6BM72 1044 aa11.35□□□□□ -0.59
HERPUD1-210ENST00000565966 OR2H2O95918 312 aa11.35□□□□□ -0.59
HERPUD1-210ENST00000565966 IGHV1-69P01742 117 aa11.35□□□□□ -0.59
HERPUD1-210ENST00000565966 SRMP19623 302 aa11.35□□□□□ -0.59
HERPUD1-210ENST00000565966 BMXP51813 675 aa11.35□□□□□ -0.59
HERPUD1-210ENST00000565966 BAMBIQ13145 260 aa11.35□□□□□ -0.59
HERPUD1-210ENST00000565966 RUSC1-AS1Q66K80 236 aa11.35□□□□□ -0.59
HERPUD1-210ENST00000565966 FAM185AQ8N0U4 392 aa11.35□□□□□ -0.59
HERPUD1-210ENST00000565966 OR8H2Q8N162 312 aa11.35□□□□□ -0.59
HERPUD1-210ENST00000565966 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.35□□□□□ -0.59
HERPUD1-210ENST00000565966 NKAIN3Q8N8D7 197 aa11.35□□□□□ -0.59
HERPUD1-210ENST00000565966 OR4S1Q8NGB4 309 aa11.35□□□□□ -0.59
HERPUD1-210ENST00000565966 OR4M1Q8NGD0 313 aa11.35□□□□□ -0.59
HERPUD1-210ENST00000565966 OR51T1Q8NGJ9 327 aa11.35□□□□□ -0.59
HERPUD1-210ENST00000565966 OR5D13Q8NGL4 314 aa11.35□□□□□ -0.59
HERPUD1-210ENST00000565966 PHYHIPQ92561 330 aa11.35□□□□□ -0.59
HERPUD1-210ENST00000565966 FCGR1BQ92637 280 aa11.35□□□□□ -0.59
HERPUD1-210ENST00000565966 NR1H4Q96RI1 486 aaPredicted RBP11.35□□□□□ -0.59
HERPUD1-210ENST00000565966 PRDM13Q9H4Q3 707 aa11.35□□□□□ -0.59
HERPUD1-210ENST00000565966 UNKLQ9H9P5 680 aaKnown RBP11.35□□□□□ -0.59
HERPUD1-210ENST00000565966 SIRT7Q9NRC8 400 aa11.35□□□□□ -0.59
HERPUD1-210ENST00000565966 MRPS28Q9Y2Q9 187 aaKnown RBP11.35□□□□□ -0.59
HERPUD1-210ENST00000565966 SIRPB1O00241 398 aa11.34□□□□□ -0.59
HERPUD1-210ENST00000565966 HTR3BO95264 441 aa11.34□□□□□ -0.59
HERPUD1-210ENST00000565966 ZNF44P15621 663 aa11.34□□□□□ -0.59
HERPUD1-210ENST00000565966 GABRR1P24046 479 aa11.34□□□□□ -0.59
HERPUD1-210ENST00000565966 PRTN3P24158 256 aa11.34□□□□□ -0.59
HERPUD1-210ENST00000565966 LMO1P25800 156 aa11.34□□□□□ -0.59
HERPUD1-210ENST00000565966 PSMB9P28065 219 aa11.34□□□□□ -0.59
HERPUD1-210ENST00000565966 OR3A1P47881 315 aa11.34□□□□□ -0.59
HERPUD1-210ENST00000565966 UBA52P62987 128 aaKnown RBP11.34□□□□□ -0.59
HERPUD1-210ENST00000565966 GUCA2AQ02747 115 aa11.34□□□□□ -0.59
HERPUD1-210ENST00000565966 SCN1BQ07699 218 aa11.34□□□□□ -0.59
HERPUD1-210ENST00000565966 DEFB112Q30KQ8 113 aa11.34□□□□□ -0.59
HERPUD1-210ENST00000565966 TMEM200BQ69YZ2 307 aa11.34□□□□□ -0.59
HERPUD1-210ENST00000565966 PDZD9Q8IXQ8 264 aa11.34□□□□□ -0.59
HERPUD1-210ENST00000565966 OR4D6Q8NGJ1 314 aa11.34□□□□□ -0.59
HERPUD1-210ENST00000565966 ZDHHC16Q969W1 377 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms