RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 POC5Q8NA72 575 aa16.11■□□□□ 0.17
CSPG4P13-201ENST00000565545 ITLN1Q8WWA0 313 aa16.11■□□□□ 0.17
CSPG4P13-201ENST00000565545 ST8SIA4Q92187 359 aa16.11■□□□□ 0.17
CSPG4P13-201ENST00000565545 EGLN1Q9GZT9 426 aa16.11■□□□□ 0.17
CSPG4P13-201ENST00000565545 GSX1Q9H4S2 264 aaPredicted RBP16.11■□□□□ 0.17
CSPG4P13-201ENST00000565545 IFT22Q9H7X7 185 aa16.11■□□□□ 0.17
CSPG4P13-201ENST00000565545 FAIMQ9NVQ4 179 aa16.11■□□□□ 0.17
CSPG4P13-201ENST00000565545 C1orf123Q9NWV4 160 aa16.11■□□□□ 0.17
CSPG4P13-201ENST00000565545 ZNF107Q9UII5 783 aaPredicted RBP16.11■□□□□ 0.17
CSPG4P13-201ENST00000565545 LANCL1O43813 399 aa16.1■□□□□ 0.17
CSPG4P13-201ENST00000565545 PTTG1O95997 202 aa16.1■□□□□ 0.17
CSPG4P13-201ENST00000565545 GLAP06280 429 aa16.1■□□□□ 0.17
CSPG4P13-201ENST00000565545 PTHLHP12272 177 aa16.1■□□□□ 0.17
CSPG4P13-201ENST00000565545 CBX5P45973 191 aa16.1■□□□□ 0.17
CSPG4P13-201ENST00000565545 SNRPD2P62316 118 aaKnown RBP16.1■□□□□ 0.17
CSPG4P13-201ENST00000565545 DYRK1AQ13627 763 aa16.1■□□□□ 0.17
CSPG4P13-201ENST00000565545 SWI5Q1ZZU3 235 aa16.1■□□□□ 0.17
CSPG4P13-201ENST00000565545 MST1LQ2TV78 715 aa16.1■□□□□ 0.17
CSPG4P13-201ENST00000565545 RNASE12Q5GAN4 147 aaKnown RBP16.1■□□□□ 0.17
CSPG4P13-201ENST00000565545 SIGIRRQ6IA17 410 aa16.1■□□□□ 0.17
CSPG4P13-201ENST00000565545 MZT2BQ6NZ67 158 aa16.1■□□□□ 0.17
CSPG4P13-201ENST00000565545 FAM90A1Q86YD7 464 aa16.1■□□□□ 0.17
CSPG4P13-201ENST00000565545 Q8TCH9 128 aa16.1■□□□□ 0.17
CSPG4P13-201ENST00000565545 FBXW5Q969U6 566 aa16.1■□□□□ 0.17
CSPG4P13-201ENST00000565545 COX4I2Q96KJ9 171 aa16.1■□□□□ 0.17
CSPG4P13-201ENST00000565545 ZNF488Q96MN9 340 aa16.1■□□□□ 0.17
CSPG4P13-201ENST00000565545 ZMAT3Q9HA38 289 aaKnown RBP16.1■□□□□ 0.17
CSPG4P13-201ENST00000565545 DYNLRB1Q9NP97 96 aa16.1■□□□□ 0.17
CSPG4P13-201ENST00000565545 UFSP2Q9NUQ7 469 aa16.1■□□□□ 0.17
CSPG4P13-201ENST00000565545 GLS2Q9UI32 602 aa16.1■□□□□ 0.17
CSPG4P13-201ENST00000565545 TBC1D24Q9ULP9 559 aa16.1■□□□□ 0.17
CSPG4P13-201ENST00000565545 KCNK7Q9Y2U2 307 aa16.1■□□□□ 0.17
CSPG4P13-201ENST00000565545 CHD3Q12873 2000 aaKnown RBP16.1■□□□□ 0.17
CSPG4P13-201ENST00000565545 ACANP16112 2415 aa16.09■□□□□ 0.17
CSPG4P13-201ENST00000565545 ABCA2Q9BZC7 2435 aa16.09■□□□□ 0.17
CSPG4P13-201ENST00000565545 hCG_1807616A0A1W2PRN6 198 aa16.09■□□□□ 0.17
CSPG4P13-201ENST00000565545 CENPXA8MT69 81 aa16.09■□□□□ 0.17
CSPG4P13-201ENST00000565545 OR7C1O76099 320 aaPredicted RBP16.09■□□□□ 0.17
CSPG4P13-201ENST00000565545 CSF1P09603 554 aa16.09■□□□□ 0.17
CSPG4P13-201ENST00000565545 GLRA1P23415 457 aa16.09■□□□□ 0.17
CSPG4P13-201ENST00000565545 ARFRP1Q13795 201 aa16.09■□□□□ 0.17
CSPG4P13-201ENST00000565545 ZNF146Q15072 292 aa16.09■□□□□ 0.17
CSPG4P13-201ENST00000565545 ZNF826PQ6ZT77 177 aa16.09■□□□□ 0.17
CSPG4P13-201ENST00000565545 OR11L1Q8NGX0 322 aa16.09■□□□□ 0.17
CSPG4P13-201ENST00000565545 CHPT1Q8WUD6 406 aa16.09■□□□□ 0.17
CSPG4P13-201ENST00000565545 LRRC29Q8WV35 223 aa16.09■□□□□ 0.17
CSPG4P13-201ENST00000565545 GCDHQ92947 438 aaPredicted RBP16.09■□□□□ 0.17
CSPG4P13-201ENST00000565545 SEBOXQ9HB31 216 aaPredicted RBP16.09■□□□□ 0.17
CSPG4P13-201ENST00000565545 RCC2Q9P258 522 aaKnown RBP16.09■□□□□ 0.17
CSPG4P13-201ENST00000565545 KLK11Q9UBX7 282 aa16.09■□□□□ 0.17
CSPG4P13-201ENST00000565545 NIPBLQ6KC79 2804 aaeCLIP16.09■□□□□ 0.17
CSPG4P13-201ENST00000565545 IGHV3-64DA0A0J9YX35 117 aa16.08■□□□□ 0.16
CSPG4P13-201ENST00000565545 ANKRD20A5PA0PJZ0 165 aa16.08■□□□□ 0.16
CSPG4P13-201ENST00000565545 SRRM5B3KS81 715 aa16.08■□□□□ 0.16
CSPG4P13-201ENST00000565545 PLA2G10O15496 165 aa16.08■□□□□ 0.16
CSPG4P13-201ENST00000565545 GUCA2AQ02747 115 aa16.08■□□□□ 0.16
CSPG4P13-201ENST00000565545 KLF9Q13886 244 aaPredicted RBP16.08■□□□□ 0.16
CSPG4P13-201ENST00000565545 SMIM21Q3B7S5 101 aa16.08■□□□□ 0.16
CSPG4P13-201ENST00000565545 NKAPLQ5M9Q1 402 aa16.08■□□□□ 0.16
CSPG4P13-201ENST00000565545 AGAP6Q5VW22 663 aa16.08■□□□□ 0.16
CSPG4P13-201ENST00000565545 ACP7Q6ZNF0 438 aa16.08■□□□□ 0.16
CSPG4P13-201ENST00000565545 TRAPPC6BQ86SZ2 158 aa16.08■□□□□ 0.16
CSPG4P13-201ENST00000565545 MOGAT3Q86VF5 341 aa16.08■□□□□ 0.16
CSPG4P13-201ENST00000565545 HPS1Q92902 700 aa16.08■□□□□ 0.16
CSPG4P13-201ENST00000565545 GCM1Q9NP62 436 aa16.08■□□□□ 0.16
CSPG4P13-201ENST00000565545 DECR2Q9NUI1 292 aa16.08■□□□□ 0.16
CSPG4P13-201ENST00000565545 NAP1L6A6NFF2 107 aa16.07■□□□□ 0.16
CSPG4P13-201ENST00000565545 A6NNC1 897 aa16.07■□□□□ 0.16
CSPG4P13-201ENST00000565545 IFNL4K9M1U5 179 aa16.07■□□□□ 0.16
CSPG4P13-201ENST00000565545 HS3ST1O14792 307 aa16.07■□□□□ 0.16
CSPG4P13-201ENST00000565545 SH2D1BO14796 132 aa16.07■□□□□ 0.16
CSPG4P13-201ENST00000565545 LYRM1O43325 122 aa16.07■□□□□ 0.16
CSPG4P13-201ENST00000565545 KNG1P01042 644 aa16.07■□□□□ 0.16
CSPG4P13-201ENST00000565545 LHBP01229 141 aa16.07■□□□□ 0.16
CSPG4P13-201ENST00000565545 FOSL1P15407 271 aa16.07■□□□□ 0.16
CSPG4P13-201ENST00000565545 RCVRNP35243 200 aa16.07■□□□□ 0.16
CSPG4P13-201ENST00000565545 PPOXP50336 477 aa16.07■□□□□ 0.16
CSPG4P13-201ENST00000565545 MRPS15P82914 257 aaKnown RBP16.07■□□□□ 0.16
CSPG4P13-201ENST00000565545 IKZF1Q13422 519 aa16.07■□□□□ 0.16
CSPG4P13-201ENST00000565545 OXA1LQ15070 435 aa16.07■□□□□ 0.16
CSPG4P13-201ENST00000565545 TRIM16LQ309B1 348 aa16.07■□□□□ 0.16
CSPG4P13-201ENST00000565545 ATAD3CQ5T2N8 411 aa16.07■□□□□ 0.16
CSPG4P13-201ENST00000565545 C6orf201Q7Z4U5 140 aa16.07■□□□□ 0.16
CSPG4P13-201ENST00000565545 BATF2Q8N1L9 274 aa16.07■□□□□ 0.16
CSPG4P13-201ENST00000565545 OCSTAMPQ9BR26 566 aa16.07■□□□□ 0.16
CSPG4P13-201ENST00000565545 CBLN4Q9NTU7 201 aa16.07■□□□□ 0.16
CSPG4P13-201ENST00000565545 RNF7Q9UBF6 113 aa16.07■□□□□ 0.16
CSPG4P13-201ENST00000565545 NPTNQ9Y639 398 aa16.07■□□□□ 0.16
CSPG4P13-201ENST00000565545 CACNG2Q9Y698 323 aa16.07■□□□□ 0.16
CSPG4P13-201ENST00000565545 LRRC30A6NM36 301 aa16.06■□□□□ 0.16
CSPG4P13-201ENST00000565545 DEGS1O15121 323 aa16.06■□□□□ 0.16
CSPG4P13-201ENST00000565545 SSX5O60225 188 aa16.06■□□□□ 0.16
CSPG4P13-201ENST00000565545 IRF2P14316 349 aa16.06■□□□□ 0.16
CSPG4P13-201ENST00000565545 FAUP35544 74 aaKnown RBP16.06■□□□□ 0.16
CSPG4P13-201ENST00000565545 TAS2R19P59542 299 aa16.06■□□□□ 0.16
CSPG4P13-201ENST00000565545 RBM39Q14498 530 aaKnown RBP16.06■□□□□ 0.16
CSPG4P13-201ENST00000565545 Q6P435 159 aa16.06■□□□□ 0.16
CSPG4P13-201ENST00000565545 TMEM229BQ8NBD8 167 aa16.06■□□□□ 0.16
CSPG4P13-201ENST00000565545 NUDCD2Q8WVJ2 157 aa16.06■□□□□ 0.16
CSPG4P13-201ENST00000565545 FAAP24Q9BTP7 215 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms