RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 A0A0X1KG70 313 aa1.6□□□□□ -2.15
PALB2-203ENST00000565038 LINC01619G3V211 115 aa1.6□□□□□ -2.15
PALB2-203ENST00000565038 MYL12BO14950 172 aa1.6□□□□□ -2.15
PALB2-203ENST00000565038 CASC3O15234 703 aaKnown RBP1.6□□□□□ -2.15
PALB2-203ENST00000565038 XRCC2O43543 280 aa1.6□□□□□ -2.15
PALB2-203ENST00000565038 MBP02144 154 aa1.6□□□□□ -2.15
PALB2-203ENST00000565038 ADORA1P30542 326 aa1.6□□□□□ -2.15
PALB2-203ENST00000565038 PEX19P40855 299 aa1.6□□□□□ -2.15
PALB2-203ENST00000565038 RGS6P49758 472 aa1.6□□□□□ -2.15
PALB2-203ENST00000565038 PSMD4P55036 377 aaKnown RBP1.6□□□□□ -2.15
PALB2-203ENST00000565038 RAB11AP62491 216 aa1.6□□□□□ -2.15
PALB2-203ENST00000565038 GRB2P62993 217 aaKnown RBP1.6□□□□□ -2.15
PALB2-203ENST00000565038 RAB11BQ15907 218 aa1.6□□□□□ -2.15
PALB2-203ENST00000565038 RPEL1Q2QD12 228 aa1.6□□□□□ -2.15
PALB2-203ENST00000565038 MLIPQ5VWP3 458 aa1.6□□□□□ -2.15
PALB2-203ENST00000565038 TRAM1L1Q8N609 369 aa1.6□□□□□ -2.15
PALB2-203ENST00000565038 WDR31Q8NA23 367 aa1.6□□□□□ -2.15
PALB2-203ENST00000565038 ZFP62Q8NB50 900 aaPredicted RBP1.6□□□□□ -2.15
PALB2-203ENST00000565038 OR8K3Q8NH51 312 aa1.6□□□□□ -2.15
PALB2-203ENST00000565038 OR1S1Q8NH92 325 aa1.6□□□□□ -2.15
PALB2-203ENST00000565038 ITFG1Q8TB96 612 aa1.6□□□□□ -2.15
PALB2-203ENST00000565038 GPX8Q8TED1 209 aa1.6□□□□□ -2.15
PALB2-203ENST00000565038 ISG20Q96AZ6 181 aaKnown RBP1.6□□□□□ -2.15
PALB2-203ENST00000565038 RCN3Q96D15 328 aa1.6□□□□□ -2.15
PALB2-203ENST00000565038 CERS2Q96G23 380 aa1.6□□□□□ -2.15
PALB2-203ENST00000565038 NAPGQ99747 312 aaPredicted RBP1.6□□□□□ -2.15
PALB2-203ENST00000565038 AGMATQ9BSE5 352 aa1.6□□□□□ -2.15
PALB2-203ENST00000565038 ABCG5Q9H222 651 aa1.6□□□□□ -2.15
PALB2-203ENST00000565038 REEP1Q9H902 201 aa1.6□□□□□ -2.15
PALB2-203ENST00000565038 MRPS30Q9NP92 439 aaKnown RBP1.6□□□□□ -2.15
PALB2-203ENST00000565038 RHBDD3Q9Y3P4 386 aa1.6□□□□□ -2.15
PALB2-203ENST00000565038 USP54Q70EL1 1684 aa1.6□□□□□ -2.15
PALB2-203ENST00000565038 ADAMTS7Q9UKP4 1686 aa1.6□□□□□ -2.15
PALB2-203ENST00000565038 MKI67P46013 3256 aaKnown RBP1.6□□□□□ -2.15
PALB2-203ENST00000565038 GOLGA6L7A0A1B0GV03 622 aa1.59□□□□□ -2.15
PALB2-203ENST00000565038 A0A1W2PRD5 423 aa1.59□□□□□ -2.15
PALB2-203ENST00000565038 PCNX2A6NKB5 2137 aa1.59□□□□□ -2.15
PALB2-203ENST00000565038 TNRC18O15417 2968 aaPredicted RBP1.59□□□□□ -2.15
PALB2-203ENST00000565038 MPDU1O75352 247 aa1.59□□□□□ -2.15
PALB2-203ENST00000565038 FARS2O95363 451 aaKnown RBP1.59□□□□□ -2.15
PALB2-203ENST00000565038 CPSF4O95639 269 aaKnown RBP1.59□□□□□ -2.15
PALB2-203ENST00000565038 CATP04040 527 aaKnown RBP1.59□□□□□ -2.15
PALB2-203ENST00000565038 SEC11BP0C7V7 166 aa1.59□□□□□ -2.15
PALB2-203ENST00000565038 PMCHP20382 165 aa1.59□□□□□ -2.15
PALB2-203ENST00000565038 RPS12P25398 132 aaKnown RBP1.59□□□□□ -2.15
PALB2-203ENST00000565038 CD82P27701 267 aa1.59□□□□□ -2.15
PALB2-203ENST00000565038 DYNLL1P63167 89 aaKnown RBP1.59□□□□□ -2.15
PALB2-203ENST00000565038 ATP5G2Q06055 141 aa1.59□□□□□ -2.15
PALB2-203ENST00000565038 TSC22D1Q15714 1073 aa1.59□□□□□ -2.15
PALB2-203ENST00000565038 KRTAP25-1Q3LHN0 102 aa1.59□□□□□ -2.15
PALB2-203ENST00000565038 PAGE2Q7Z2X7 111 aa1.59□□□□□ -2.15
PALB2-203ENST00000565038 APRG1Q8IVJ8 170 aa1.59□□□□□ -2.15
PALB2-203ENST00000565038 CMTM8Q8IZV2 173 aa1.59□□□□□ -2.15
PALB2-203ENST00000565038 C8orf31Q8N9H6 132 aa1.59□□□□□ -2.15
PALB2-203ENST00000565038 OR5T3Q8NGG3 340 aa1.59□□□□□ -2.15
PALB2-203ENST00000565038 GLYATL2Q8WU03 294 aa1.59□□□□□ -2.15
PALB2-203ENST00000565038 ITLN2Q8WWU7 325 aaPredicted RBP1.59□□□□□ -2.15
PALB2-203ENST00000565038 ISOC2Q96AB3 205 aa1.59□□□□□ -2.15
PALB2-203ENST00000565038 OPTNQ96CV9 577 aa1.59□□□□□ -2.15
PALB2-203ENST00000565038 UBE2E2Q96LR5 201 aa1.59□□□□□ -2.15
PALB2-203ENST00000565038 KLF6Q99612 283 aaPredicted RBP1.59□□□□□ -2.15
PALB2-203ENST00000565038 BCL7BQ9BQE9 202 aa1.59□□□□□ -2.15
PALB2-203ENST00000565038 TMEM175Q9BSA9 504 aa1.59□□□□□ -2.15
PALB2-203ENST00000565038 COA1Q9GZY4 146 aa1.59□□□□□ -2.15
PALB2-203ENST00000565038 RGCCQ9H4X1 137 aa1.59□□□□□ -2.15
PALB2-203ENST00000565038 CYP3A43Q9HB55 503 aa1.59□□□□□ -2.15
PALB2-203ENST00000565038 FANCEQ9HB96 536 aa1.59□□□□□ -2.15
PALB2-203ENST00000565038 NLE1Q9NVX2 485 aaPredicted RBP1.59□□□□□ -2.15
PALB2-203ENST00000565038 PPIL1Q9Y3C6 166 aa1.59□□□□□ -2.15
PALB2-203ENST00000565038 ENPP4Q9Y6X5 453 aa1.59□□□□□ -2.15
PALB2-203ENST00000565038 RANBP2P49792 3224 aaKnown RBP1.59□□□□□ -2.16
PALB2-203ENST00000565038 TJP1Q07157 1748 aa1.59□□□□□ -2.16
PALB2-203ENST00000565038 TAF1LQ8IZX4 1826 aa1.59□□□□□ -2.16
PALB2-203ENST00000565038 CACNA1SQ13698 1873 aa1.58□□□□□ -2.16
PALB2-203ENST00000565038 C5P01031 1676 aa1.58□□□□□ -2.16
PALB2-203ENST00000565038 CACNA1DQ01668 2161 aa1.58□□□□□ -2.16
PALB2-203ENST00000565038 PKD1L3Q7Z443 1732 aa1.58□□□□□ -2.16
PALB2-203ENST00000565038 CENPFP49454 3210 aa1.58□□□□□ -2.16
PALB2-203ENST00000565038 GOLGA8JA6NMD2 632 aa1.58□□□□□ -2.16
PALB2-203ENST00000565038 D6RAR5 112 aa1.58□□□□□ -2.16
PALB2-203ENST00000565038 IGHMP01871 453 aa1.58□□□□□ -2.16
PALB2-203ENST00000565038 GOLGA8HP0CJ92 632 aa1.58□□□□□ -2.16
PALB2-203ENST00000565038 GABRR2P28476 465 aa1.58□□□□□ -2.16
PALB2-203ENST00000565038 CLDN8P56748 225 aa1.58□□□□□ -2.16
PALB2-203ENST00000565038 ATP6V0D1P61421 351 aa1.58□□□□□ -2.16
PALB2-203ENST00000565038 ADIGQ0VDE8 80 aa1.58□□□□□ -2.16
PALB2-203ENST00000565038 MAPRE2Q15555 327 aa1.58□□□□□ -2.16
PALB2-203ENST00000565038 KIF2BQ8N4N8 673 aa1.58□□□□□ -2.16
PALB2-203ENST00000565038 RNF10Q8N5U6 811 aaKnown RBP1.58□□□□□ -2.16
PALB2-203ENST00000565038 PROKR2Q8NFJ6 384 aa1.58□□□□□ -2.16
PALB2-203ENST00000565038 OR2M7Q8NG81 312 aa1.58□□□□□ -2.16
PALB2-203ENST00000565038 ZNF707Q96C28 371 aaPredicted RBP1.58□□□□□ -2.16
PALB2-203ENST00000565038 FXYD5Q96DB9 178 aa1.58□□□□□ -2.16
PALB2-203ENST00000565038 MRPL48Q96GC5 212 aaKnown RBP1.58□□□□□ -2.16
PALB2-203ENST00000565038 C9orf72Q96LT7 481 aa1.58□□□□□ -2.16
PALB2-203ENST00000565038 Q96MT0 163 aa1.58□□□□□ -2.16
PALB2-203ENST00000565038 OPALINQ96PE5 141 aa1.58□□□□□ -2.16
PALB2-203ENST00000565038 CSPG4P5Q96PW8 444 aa1.58□□□□□ -2.16
PALB2-203ENST00000565038 PEBP4Q96S96 227 aa1.58□□□□□ -2.16
PALB2-203ENST00000565038 OR2AG1Q9H205 316 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms