RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 NANPQ8TBE9 248 aa13.82□□□□□ -0.2
RNF40-206ENST00000564260 CST11Q9H112 138 aa13.82□□□□□ -0.2
RNF40-206ENST00000564260 CNTD2Q9H8S5 307 aa13.82□□□□□ -0.2
RNF40-206ENST00000564260 SPACA1Q9HBV2 294 aa13.82□□□□□ -0.2
RNF40-206ENST00000564260 MMP26Q9NRE1 261 aa13.82□□□□□ -0.2
RNF40-206ENST00000564260 OR14J1Q9UGF5 321 aa13.82□□□□□ -0.2
RNF40-206ENST00000564260 MRPS28Q9Y2Q9 187 aaKnown RBP13.82□□□□□ -0.2
RNF40-206ENST00000564260 MAGEA13PA6NCF6 341 aa13.81□□□□□ -0.2
RNF40-206ENST00000564260 M0R1W7 72 aa13.81□□□□□ -0.2
RNF40-206ENST00000564260 MGST3O14880 152 aa13.81□□□□□ -0.2
RNF40-206ENST00000564260 SLC22A1O15245 554 aa13.81□□□□□ -0.2
RNF40-206ENST00000564260 BPNT1O95861 308 aa13.81□□□□□ -0.2
RNF40-206ENST00000564260 FAM157CP0CG43 387 aa13.81□□□□□ -0.2
RNF40-206ENST00000564260 NDUFB7P17568 137 aa13.81□□□□□ -0.2
RNF40-206ENST00000564260 ADRA2CP18825 462 aa13.81□□□□□ -0.2
RNF40-206ENST00000564260 RIPPLY3P57055 190 aa13.81□□□□□ -0.2
RNF40-206ENST00000564260 COL10A1Q03692 680 aa13.81□□□□□ -0.2
RNF40-206ENST00000564260 MEF2CQ06413 473 aaPredicted RBP13.81□□□□□ -0.2
RNF40-206ENST00000564260 INSL4Q14641 139 aa13.81□□□□□ -0.2
RNF40-206ENST00000564260 FAM27D1Q5T7N8 215 aa13.81□□□□□ -0.2
RNF40-206ENST00000564260 AWAT2Q6E213 333 aa13.81□□□□□ -0.2
RNF40-206ENST00000564260 UPRTQ96BW1 309 aa13.81□□□□□ -0.2
RNF40-206ENST00000564260 ORAI1Q96D31 301 aa13.81□□□□□ -0.2
RNF40-206ENST00000564260 PPIL3Q9H2H8 161 aaKnown RBP13.81□□□□□ -0.2
RNF40-206ENST00000564260 NCOR1P1Q9H4R4 102 aa13.81□□□□□ -0.2
RNF40-206ENST00000564260 ELL3Q9HB65 397 aaPredicted RBP13.81□□□□□ -0.2
RNF40-206ENST00000564260 SSR3Q9UNL2 185 aa13.81□□□□□ -0.2
RNF40-206ENST00000564260 NIPBLQ6KC79 2804 aaeCLIP13.81□□□□□ -0.2
RNF40-206ENST00000564260 hCG_1809904A0A1W2PP81 198 aa13.8□□□□□ -0.2
RNF40-206ENST00000564260 A0A1W2PPE2 198 aa13.8□□□□□ -0.2
RNF40-206ENST00000564260 A0A1W2PR64 198 aa13.8□□□□□ -0.2
RNF40-206ENST00000564260 A0A1W2PRV1 198 aa13.8□□□□□ -0.2
RNF40-206ENST00000564260 SLC17A2O00624 439 aa13.8□□□□□ -0.2
RNF40-206ENST00000564260 TMEM127O75204 238 aa13.8□□□□□ -0.2
RNF40-206ENST00000564260 FCN3O75636 299 aa13.8□□□□□ -0.2
RNF40-206ENST00000564260 RBP4P02753 201 aa13.8□□□□□ -0.2
RNF40-206ENST00000564260 SRD5A1P18405 259 aa13.8□□□□□ -0.2
RNF40-206ENST00000564260 RBM11P57052 281 aaKnown RBP13.8□□□□□ -0.2
RNF40-206ENST00000564260 NEDD8Q15843 81 aa13.8□□□□□ -0.2
RNF40-206ENST00000564260 METTL11BQ5VVY1 283 aa13.8□□□□□ -0.2
RNF40-206ENST00000564260 GLIPR1L1Q6UWM5 242 aa13.8□□□□□ -0.2
RNF40-206ENST00000564260 Q71RC1 249 aaPredicted RBP13.8□□□□□ -0.2
RNF40-206ENST00000564260 GDPD3Q7L5L3 318 aa13.8□□□□□ -0.2
RNF40-206ENST00000564260 RNF144BQ7Z419 303 aa13.8□□□□□ -0.2
RNF40-206ENST00000564260 TPRA1Q86W33 373 aa13.8□□□□□ -0.2
RNF40-206ENST00000564260 ASCC1Q8N9N2 400 aaKnown RBP13.8□□□□□ -0.2
RNF40-206ENST00000564260 UNKLQ9H9P5 680 aaKnown RBP13.8□□□□□ -0.2
RNF40-206ENST00000564260 OPN4Q9UHM6 478 aa13.8□□□□□ -0.2
RNF40-206ENST00000564260 ING4Q9UNL4 249 aa13.8□□□□□ -0.2
RNF40-206ENST00000564260 A0A1B0GW55 424 aa13.79□□□□□ -0.2
RNF40-206ENST00000564260 HTR3BO95264 441 aa13.79□□□□□ -0.2
RNF40-206ENST00000564260 OR2H2O95918 312 aa13.79□□□□□ -0.2
RNF40-206ENST00000564260 FSHBP01225 129 aa13.79□□□□□ -0.2
RNF40-206ENST00000564260 GLAP06280 429 aa13.79□□□□□ -0.2
RNF40-206ENST00000564260 DUX4L2P0CJ85 424 aa13.79□□□□□ -0.2
RNF40-206ENST00000564260 DUX4L3P0CJ86 424 aa13.79□□□□□ -0.2
RNF40-206ENST00000564260 DUX4L4P0CJ87 422 aa13.79□□□□□ -0.2
RNF40-206ENST00000564260 DUX4L5P0CJ88 424 aa13.79□□□□□ -0.2
RNF40-206ENST00000564260 DUX4L6P0CJ89 424 aa13.79□□□□□ -0.2
RNF40-206ENST00000564260 DUX4L7P0CJ90 424 aa13.79□□□□□ -0.2
RNF40-206ENST00000564260 HTR2CP28335 458 aa13.79□□□□□ -0.2
RNF40-206ENST00000564260 RPL31P62899 125 aaKnown RBP13.79□□□□□ -0.2
RNF40-206ENST00000564260 BLMHQ13867 455 aa13.79□□□□□ -0.2
RNF40-206ENST00000564260 PDCD1Q15116 288 aa13.79□□□□□ -0.2
RNF40-206ENST00000564260 FAM189A2Q15884 450 aa13.79□□□□□ -0.2
RNF40-206ENST00000564260 DUX4L9Q6RFH8 374 aaPredicted RBP13.79□□□□□ -0.2
RNF40-206ENST00000564260 C17orf107Q6ZR85 190 aa13.79□□□□□ -0.2
RNF40-206ENST00000564260 OR4D6Q8NGJ1 314 aa13.79□□□□□ -0.2
RNF40-206ENST00000564260 C1orf147Q96MC9 270 aaPredicted RBP13.79□□□□□ -0.2
RNF40-206ENST00000564260 DUX4Q9UBX2 424 aa13.79□□□□□ -0.2
RNF40-206ENST00000564260 FBLN5Q9UBX5 448 aa13.79□□□□□ -0.2
RNF40-206ENST00000564260 ST3GAL6Q9Y274 331 aa13.79□□□□□ -0.2
RNF40-206ENST00000564260 V9GY05 133 aa13.79□□□□□ -0.2
RNF40-206ENST00000564260 NF1P21359 2839 aa13.78□□□□□ -0.2
RNF40-206ENST00000564260 ANK3Q12955 4377 aaKnown RBP13.78□□□□□ -0.2
RNF40-206ENST00000564260 FN1P02751 2386 aaKnown RBP13.78□□□□□ -0.2
RNF40-206ENST00000564260 DEGS1O15121 323 aa13.78□□□□□ -0.2
RNF40-206ENST00000564260 CDRT1O95170 752 aa13.78□□□□□ -0.2
RNF40-206ENST00000564260 SELLP14151 372 aa13.78□□□□□ -0.2
RNF40-206ENST00000564260 ZNF44P15621 663 aa13.78□□□□□ -0.2
RNF40-206ENST00000564260 CD36P16671 472 aa13.78□□□□□ -0.2
RNF40-206ENST00000564260 GABRR1P24046 479 aa13.78□□□□□ -0.2
RNF40-206ENST00000564260 SRP14P37108 136 aaKnown RBP13.78□□□□□ -0.2
RNF40-206ENST00000564260 SLC22A6Q4U2R8 563 aa13.78□□□□□ -0.2
RNF40-206ENST00000564260 Q6P435 159 aa13.78□□□□□ -0.2
RNF40-206ENST00000564260 METAP1DQ6UB28 335 aaPredicted RBP13.78□□□□□ -0.2
RNF40-206ENST00000564260 OR2W3Q7Z3T1 314 aa13.78□□□□□ -0.2
RNF40-206ENST00000564260 KCNG3Q8TAE7 436 aa13.78□□□□□ -0.2
RNF40-206ENST00000564260 H1FXQ92522 213 aaKnown RBP13.78□□□□□ -0.2
RNF40-206ENST00000564260 KCTD7Q96MP8 289 aa13.78□□□□□ -0.2
RNF40-206ENST00000564260 WDFY2Q96P53 400 aa13.78□□□□□ -0.2
RNF40-206ENST00000564260 TXNL4BQ9NX01 149 aaKnown RBP13.78□□□□□ -0.2
RNF40-206ENST00000564260 A0A0G2JK05 382 aa13.77□□□□□ -0.21
RNF40-206ENST00000564260 A0A1W2PQ09 198 aa13.77□□□□□ -0.21
RNF40-206ENST00000564260 hADV38S2A0JD32 116 aa13.77□□□□□ -0.21
RNF40-206ENST00000564260 TMEM82A0PJX8 343 aa13.77□□□□□ -0.21
RNF40-206ENST00000564260 PSPNO60542 156 aa13.77□□□□□ -0.21
RNF40-206ENST00000564260 IFNA2P01563 188 aa13.77□□□□□ -0.21
RNF40-206ENST00000564260 MMP9P14780 707 aa13.77□□□□□ -0.21
RNF40-206ENST00000564260 SERPINA2P20848 420 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms