RNA–Protein interactions for RNA: ENST00000563963.1

TUBGCP4-207, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 2

Gene TUBGCP4, Length 4,379 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-207ENST00000563963 ZNF195O14628 629 aa5.2□□□□□ -1.58
TUBGCP4-207ENST00000563963 EGR1P18146 543 aa5.2□□□□□ -1.58
TUBGCP4-207ENST00000563963 TIA1P31483 386 aaKnown RBP eCLIP5.2□□□□□ -1.58
TUBGCP4-207ENST00000563963 BDKRB1P46663 353 aa5.2□□□□□ -1.58
TUBGCP4-207ENST00000563963 RPS23P62266 143 aaKnown RBP5.2□□□□□ -1.58
TUBGCP4-207ENST00000563963 SIRPAP78324 504 aa5.2□□□□□ -1.58
TUBGCP4-207ENST00000563963 PSG4Q00888 419 aa5.2□□□□□ -1.58
TUBGCP4-207ENST00000563963 COA6Q5JTJ3 125 aaKnown RBP5.2□□□□□ -1.58
TUBGCP4-207ENST00000563963 TMEM78Q5T7P6 136 aa5.2□□□□□ -1.58
TUBGCP4-207ENST00000563963 MDGA2Q7Z553 956 aa5.2□□□□□ -1.58
TUBGCP4-207ENST00000563963 TBL1YQ9BQ87 522 aa5.2□□□□□ -1.58
TUBGCP4-207ENST00000563963 RHOJQ9H4E5 214 aa5.2□□□□□ -1.58
TUBGCP4-207ENST00000563963 ACSS2Q9NR19 701 aa5.2□□□□□ -1.58
TUBGCP4-207ENST00000563963 ASIC5Q9NY37 505 aa5.2□□□□□ -1.58
TUBGCP4-207ENST00000563963 SCML2Q9UQR0 700 aa5.2□□□□□ -1.58
TUBGCP4-207ENST00000563963 CHD3Q12873 2000 aaKnown RBP5.2□□□□□ -1.58
TUBGCP4-207ENST00000563963 A0A1W2PRF3 423 aa5.2□□□□□ -1.58
TUBGCP4-207ENST00000563963 A0A1W2PRM7 423 aa5.2□□□□□ -1.58
TUBGCP4-207ENST00000563963 J3KTA2 159 aa5.2□□□□□ -1.58
TUBGCP4-207ENST00000563963 HLA-HP01893 362 aa5.2□□□□□ -1.58
TUBGCP4-207ENST00000563963 PGA4P0DJD7 388 aa5.2□□□□□ -1.58
TUBGCP4-207ENST00000563963 PGA5P0DJD9 388 aa5.2□□□□□ -1.58
TUBGCP4-207ENST00000563963 SDHBP21912 280 aa5.2□□□□□ -1.58
TUBGCP4-207ENST00000563963 FAUP35544 74 aaKnown RBP5.2□□□□□ -1.58
TUBGCP4-207ENST00000563963 KIR2DL2P43627 348 aaPredicted RBP5.2□□□□□ -1.58
TUBGCP4-207ENST00000563963 P2RY1P47900 373 aa5.2□□□□□ -1.58
TUBGCP4-207ENST00000563963 HLA-BQ31612 363 aa5.2□□□□□ -1.58
TUBGCP4-207ENST00000563963 C4orf48Q5BLP8 95 aa5.2□□□□□ -1.58
TUBGCP4-207ENST00000563963 VWA2Q5GFL6 755 aa5.2□□□□□ -1.58
TUBGCP4-207ENST00000563963 FAM162BQ5T6X4 162 aa5.2□□□□□ -1.58
TUBGCP4-207ENST00000563963 LYPD4Q6UWN0 246 aa5.2□□□□□ -1.58
TUBGCP4-207ENST00000563963 C17orf64Q86WR6 236 aa5.2□□□□□ -1.58
TUBGCP4-207ENST00000563963 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.2□□□□□ -1.58
TUBGCP4-207ENST00000563963 MUCL1Q96DR8 90 aa5.2□□□□□ -1.58
TUBGCP4-207ENST00000563963 CDX2Q99626 313 aaPredicted RBP5.2□□□□□ -1.58
TUBGCP4-207ENST00000563963 PBX4Q9BYU1 374 aa5.2□□□□□ -1.58
TUBGCP4-207ENST00000563963 SPAARA0A1B0GVQ0 90 aa5.2□□□□□ -1.58
TUBGCP4-207ENST00000563963 OR2M5A3KFT3 312 aa5.2□□□□□ -1.58
TUBGCP4-207ENST00000563963 RAB27BO00194 218 aa5.2□□□□□ -1.58
TUBGCP4-207ENST00000563963 NBR2O15453 112 aa5.2□□□□□ -1.58
TUBGCP4-207ENST00000563963 HYAL3O43820 417 aaPredicted RBP5.2□□□□□ -1.58
TUBGCP4-207ENST00000563963 RPL12P30050 165 aaKnown RBP5.2□□□□□ -1.58
TUBGCP4-207ENST00000563963 SRP14P37108 136 aaKnown RBP5.2□□□□□ -1.58
TUBGCP4-207ENST00000563963 PDX1P52945 283 aa5.2□□□□□ -1.58
TUBGCP4-207ENST00000563963 RPL8P62917 257 aaKnown RBP5.2□□□□□ -1.58
TUBGCP4-207ENST00000563963 GRB2P62993 217 aaKnown RBP5.2□□□□□ -1.58
TUBGCP4-207ENST00000563963 HGFACQ04756 655 aa5.2□□□□□ -1.58
TUBGCP4-207ENST00000563963 C20orf196Q8IYI0 205 aa5.2□□□□□ -1.58
TUBGCP4-207ENST00000563963 ZNF676Q8N7Q3 588 aa5.2□□□□□ -1.58
TUBGCP4-207ENST00000563963 ACOT4Q8N9L9 421 aa5.2□□□□□ -1.58
TUBGCP4-207ENST00000563963 C8orf44Q96CB5 159 aa5.2□□□□□ -1.58
TUBGCP4-207ENST00000563963 AKTIPQ9H8T0 292 aa5.2□□□□□ -1.58
TUBGCP4-207ENST00000563963 CLDND1Q9NY35 253 aa5.2□□□□□ -1.58
TUBGCP4-207ENST00000563963 HHLA1C9JL84 531 aa5.19□□□□□ -1.58
TUBGCP4-207ENST00000563963 CYB5AP00167 134 aa5.19□□□□□ -1.58
TUBGCP4-207ENST00000563963 PSMB4P28070 264 aa5.19□□□□□ -1.58
TUBGCP4-207ENST00000563963 PPP1R1AQ13522 171 aa5.19□□□□□ -1.58
TUBGCP4-207ENST00000563963 DOK7Q18PE1 504 aa5.19□□□□□ -1.58
TUBGCP4-207ENST00000563963 SPRYD7Q5W111 196 aa5.19□□□□□ -1.58
TUBGCP4-207ENST00000563963 OPN5Q6U736 354 aa5.19□□□□□ -1.58
TUBGCP4-207ENST00000563963 TMEM184AQ6ZMB5 413 aa5.19□□□□□ -1.58
TUBGCP4-207ENST00000563963 ZNF730Q6ZMV8 503 aa5.19□□□□□ -1.58
TUBGCP4-207ENST00000563963 IL22RA1Q8N6P7 574 aa5.19□□□□□ -1.58
TUBGCP4-207ENST00000563963 FAM110DQ8TAY7 271 aaPredicted RBP5.19□□□□□ -1.58
TUBGCP4-207ENST00000563963 PP6455Q8WZ26 134 aa5.19□□□□□ -1.58
TUBGCP4-207ENST00000563963 ZG16BQ96DA0 208 aa5.19□□□□□ -1.58
TUBGCP4-207ENST00000563963 STARD4Q96DR4 205 aa5.19□□□□□ -1.58
TUBGCP4-207ENST00000563963 SPATA25Q9BR10 227 aa5.19□□□□□ -1.58
TUBGCP4-207ENST00000563963 MRPL45Q9BRJ2 306 aaKnown RBP5.19□□□□□ -1.58
TUBGCP4-207ENST00000563963 SERTAD4Q9NUC0 356 aa5.19□□□□□ -1.58
TUBGCP4-207ENST00000563963 NOP16Q9Y3C1 178 aaKnown RBP5.19□□□□□ -1.58
TUBGCP4-207ENST00000563963 ODAMA1E959 279 aa5.19□□□□□ -1.58
TUBGCP4-207ENST00000563963 CGB1A6NKQ9 187 aa5.19□□□□□ -1.58
TUBGCP4-207ENST00000563963 MT-CO3P00414 261 aa5.19□□□□□ -1.58
TUBGCP4-207ENST00000563963 CTSEP14091 401 aa5.19□□□□□ -1.58
TUBGCP4-207ENST00000563963 TNFAIP8L2Q6P589 184 aaPredicted RBP5.19□□□□□ -1.58
TUBGCP4-207ENST00000563963 SLC23A3Q6PIS1 610 aa5.19□□□□□ -1.58
TUBGCP4-207ENST00000563963 ZNF615Q8N8J6 731 aa5.19□□□□□ -1.58
TUBGCP4-207ENST00000563963 ZDHHC22Q8N966 263 aa5.19□□□□□ -1.58
TUBGCP4-207ENST00000563963 GPR32P1Q8NGA4 272 aa5.19□□□□□ -1.58
TUBGCP4-207ENST00000563963 BAALCQ8WXS3 180 aa5.19□□□□□ -1.58
TUBGCP4-207ENST00000563963 HIST1H2AAQ96QV6 131 aa5.19□□□□□ -1.58
TUBGCP4-207ENST00000563963 BPIFA1Q9NP55 256 aa5.19□□□□□ -1.58
TUBGCP4-207ENST00000563963 TAS2R5Q9NYW4 299 aa5.19□□□□□ -1.58
TUBGCP4-207ENST00000563963 SNX11Q9Y5W9 270 aa5.19□□□□□ -1.58
TUBGCP4-207ENST00000563963 PHIPQ8WWQ0 1821 aa5.19□□□□□ -1.58
TUBGCP4-207ENST00000563963 TRAV36DV7A0A075B6V5 113 aa5.19□□□□□ -1.58
TUBGCP4-207ENST00000563963 TCRBV5S1A1TA0A578 114 aa5.19□□□□□ -1.58
TUBGCP4-207ENST00000563963 H0YIG0 161 aa5.19□□□□□ -1.58
TUBGCP4-207ENST00000563963 PLPP1O14494 284 aa5.19□□□□□ -1.58
TUBGCP4-207ENST00000563963 IGLC1P0CG04 106 aa5.19□□□□□ -1.58
TUBGCP4-207ENST00000563963 ZNF133P52736 654 aaPredicted RBP5.19□□□□□ -1.58
TUBGCP4-207ENST00000563963 RBM11P57052 281 aaKnown RBP5.19□□□□□ -1.58
TUBGCP4-207ENST00000563963 GNG5P63218 68 aa5.19□□□□□ -1.58
TUBGCP4-207ENST00000563963 SLC35A1P78382 337 aa5.19□□□□□ -1.58
TUBGCP4-207ENST00000563963 ZXDBP98169 803 aa5.19□□□□□ -1.58
TUBGCP4-207ENST00000563963 CXCL9Q07325 125 aa5.19□□□□□ -1.58
TUBGCP4-207ENST00000563963 MS4A18Q3C1V0 323 aa5.19□□□□□ -1.58
TUBGCP4-207ENST00000563963 SPATA45Q537H7 98 aa5.19□□□□□ -1.58
TUBGCP4-207ENST00000563963 TTC32Q5I0X7 151 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms