RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 MYL9P24844 172 aa12.94□□□□□ -0.34
USB1-208ENST00000563207 PRDX2P32119 198 aa12.94□□□□□ -0.34
USB1-208ENST00000563207 NPBWR2P48146 333 aa12.94□□□□□ -0.34
USB1-208ENST00000563207 BAMBIQ13145 260 aa12.94□□□□□ -0.34
USB1-208ENST00000563207 RSU1Q15404 277 aa12.94□□□□□ -0.34
USB1-208ENST00000563207 CD276Q5ZPR3 534 aa12.94□□□□□ -0.34
USB1-208ENST00000563207 BRD3OSQ6XYD6 125 aa12.94□□□□□ -0.34
USB1-208ENST00000563207 RNF144BQ7Z419 303 aa12.94□□□□□ -0.34
USB1-208ENST00000563207 ZNF561Q8N587 486 aa12.94□□□□□ -0.34
USB1-208ENST00000563207 OR5T2Q8NGG2 359 aa12.94□□□□□ -0.34
USB1-208ENST00000563207 SEH1LQ96EE3 360 aa12.94□□□□□ -0.34
USB1-208ENST00000563207 FAM192AQ9GZU8 254 aa12.94□□□□□ -0.34
USB1-208ENST00000563207 MS4A7Q9GZW8 240 aaPredicted RBP12.94□□□□□ -0.34
USB1-208ENST00000563207 ZNF222Q9UK12 451 aa12.94□□□□□ -0.34
USB1-208ENST00000563207 MEGF8Q7Z7M0 2845 aa12.94□□□□□ -0.34
USB1-208ENST00000563207 IGKV1D-17A0A075B6S4 117 aa12.93□□□□□ -0.34
USB1-208ENST00000563207 TRAV40A0A0B4J280 105 aa12.93□□□□□ -0.34
USB1-208ENST00000563207 F8VVB4 439 aa12.93□□□□□ -0.34
USB1-208ENST00000563207 F8VWA3 439 aa12.93□□□□□ -0.34
USB1-208ENST00000563207 SIGLEC5O15389 551 aa12.93□□□□□ -0.34
USB1-208ENST00000563207 NDUFB3O43676 98 aa12.93□□□□□ -0.34
USB1-208ENST00000563207 ECDO95905 644 aaPredicted RBP12.93□□□□□ -0.34
USB1-208ENST00000563207 UBBP0CG47 229 aa12.93□□□□□ -0.34
USB1-208ENST00000563207 SMIM18P0DKX4 95 aa12.93□□□□□ -0.34
USB1-208ENST00000563207 HKR1P10072 659 aa12.93□□□□□ -0.34
USB1-208ENST00000563207 GABRA2P47869 451 aa12.93□□□□□ -0.34
USB1-208ENST00000563207 OR3A4PP47883 348 aa12.93□□□□□ -0.34
USB1-208ENST00000563207 FGF12P61328 243 aa12.93□□□□□ -0.34
USB1-208ENST00000563207 SLC9A3R2Q15599 337 aa12.93□□□□□ -0.34
USB1-208ENST00000563207 LRRC10Q5BKY1 277 aa12.93□□□□□ -0.34
USB1-208ENST00000563207 C1orf100Q5SVJ3 147 aa12.93□□□□□ -0.34
USB1-208ENST00000563207 WDR25Q64LD2 544 aaPredicted RBP12.93□□□□□ -0.34
USB1-208ENST00000563207 RBMS3Q6XE24 437 aaKnown RBP12.93□□□□□ -0.34
USB1-208ENST00000563207 FGFRL1Q8N441 504 aa12.93□□□□□ -0.34
USB1-208ENST00000563207 TBC1D15Q8TC07 691 aa12.93□□□□□ -0.34
USB1-208ENST00000563207 UPRTQ96BW1 309 aa12.93□□□□□ -0.34
USB1-208ENST00000563207 MRPS24Q96EL2 167 aaKnown RBP12.93□□□□□ -0.34
USB1-208ENST00000563207 DMRTB1Q96MA1 342 aa12.93□□□□□ -0.34
USB1-208ENST00000563207 CCL13Q99616 98 aa12.93□□□□□ -0.34
USB1-208ENST00000563207 NUDT16L1Q9BRJ7 211 aaKnown RBP12.93□□□□□ -0.34
USB1-208ENST00000563207 CNTD2Q9H8S5 307 aa12.93□□□□□ -0.34
USB1-208ENST00000563207 RBFOX1Q9NWB1 397 aaKnown RBP12.93□□□□□ -0.34
USB1-208ENST00000563207 TXNL4BQ9NX01 149 aaKnown RBP12.93□□□□□ -0.34
USB1-208ENST00000563207 KIR2DS1A0A191URI9 304 aa12.92□□□□□ -0.34
USB1-208ENST00000563207 SH2D1BO14796 132 aa12.92□□□□□ -0.34
USB1-208ENST00000563207 CSTBP04080 98 aaKnown RBP12.92□□□□□ -0.34
USB1-208ENST00000563207 SFTPBP07988 381 aa12.92□□□□□ -0.34
USB1-208ENST00000563207 CHRM2P08172 466 aa12.92□□□□□ -0.34
USB1-208ENST00000563207 PRKACAP17612 351 aa12.92□□□□□ -0.34
USB1-208ENST00000563207 AMY2BP19961 511 aa12.92□□□□□ -0.34
USB1-208ENST00000563207 CAV3P56539 151 aa12.92□□□□□ -0.34
USB1-208ENST00000563207 RUSC1-AS1Q66K80 236 aa12.92□□□□□ -0.34
USB1-208ENST00000563207 AWAT2Q6E213 333 aa12.92□□□□□ -0.34
USB1-208ENST00000563207 C22orf42Q6IC83 251 aa12.92□□□□□ -0.34
USB1-208ENST00000563207 TPRA1Q86W33 373 aa12.92□□□□□ -0.34
USB1-208ENST00000563207 OR51T1Q8NGJ9 327 aa12.92□□□□□ -0.34
USB1-208ENST00000563207 OR6M1Q8NGM8 313 aa12.92□□□□□ -0.34
USB1-208ENST00000563207 KCTD7Q96MP8 289 aa12.92□□□□□ -0.34
USB1-208ENST00000563207 GAFA1Q96PS6 74 aa12.92□□□□□ -0.34
USB1-208ENST00000563207 FAM234AQ9H0X4 552 aa12.92□□□□□ -0.34
USB1-208ENST00000563207 ELL3Q9HB65 397 aaPredicted RBP12.92□□□□□ -0.34
USB1-208ENST00000563207 EXOSC4Q9NPD3 245 aaKnown RBP12.92□□□□□ -0.34
USB1-208ENST00000563207 TNFRSF19Q9NS68 423 aa12.92□□□□□ -0.34
USB1-208ENST00000563207 ING4Q9UNL4 249 aa12.92□□□□□ -0.34
USB1-208ENST00000563207 MRPS28Q9Y2Q9 187 aaKnown RBP12.92□□□□□ -0.34
USB1-208ENST00000563207 DVL1O14640 695 aa12.91□□□□□ -0.34
USB1-208ENST00000563207 WIPF1O43516 503 aa12.91□□□□□ -0.34
USB1-208ENST00000563207 OMGP23515 440 aa12.91□□□□□ -0.34
USB1-208ENST00000563207 GADD45AP24522 165 aa12.91□□□□□ -0.34
USB1-208ENST00000563207 CAPZA1P52907 286 aa12.91□□□□□ -0.34
USB1-208ENST00000563207 IL13RA2Q14627 380 aa12.91□□□□□ -0.34
USB1-208ENST00000563207 DGUOKQ16854 277 aa12.91□□□□□ -0.34
USB1-208ENST00000563207 DEFB112Q30KQ8 113 aa12.91□□□□□ -0.34
USB1-208ENST00000563207 NHLRC3Q5JS37 347 aa12.91□□□□□ -0.34
USB1-208ENST00000563207 GLIPR1L1Q6UWM5 242 aa12.91□□□□□ -0.34
USB1-208ENST00000563207 LINC00596Q86U02 117 aa12.91□□□□□ -0.34
USB1-208ENST00000563207 OR13F1Q8NGS4 319 aa12.91□□□□□ -0.34
USB1-208ENST00000563207 YIPF6Q96EC8 236 aa12.91□□□□□ -0.34
USB1-208ENST00000563207 OR51E2Q9H255 320 aa12.91□□□□□ -0.34
USB1-208ENST00000563207 OR14J1Q9UGF5 321 aa12.91□□□□□ -0.34
USB1-208ENST00000563207 MAB21L2Q9Y586 359 aa12.91□□□□□ -0.34
USB1-208ENST00000563207 V9GY05 133 aa12.91□□□□□ -0.34
USB1-208ENST00000563207 A0A1B0GW55 424 aa12.9□□□□□ -0.34
USB1-208ENST00000563207 H3BUI4 141 aa12.9□□□□□ -0.34
USB1-208ENST00000563207 SLC17A2O00624 439 aa12.9□□□□□ -0.34
USB1-208ENST00000563207 SLC22A1O15245 554 aa12.9□□□□□ -0.34
USB1-208ENST00000563207 CDRT1O95170 752 aa12.9□□□□□ -0.34
USB1-208ENST00000563207 HTR3BO95264 441 aa12.9□□□□□ -0.34
USB1-208ENST00000563207 HAND1O96004 215 aa12.9□□□□□ -0.34
USB1-208ENST00000563207 LIPFP07098 398 aa12.9□□□□□ -0.34
USB1-208ENST00000563207 RNASE1P07998 156 aaKnown RBP12.9□□□□□ -0.34
USB1-208ENST00000563207 DUX4L2P0CJ85 424 aa12.9□□□□□ -0.34
USB1-208ENST00000563207 DUX4L3P0CJ86 424 aa12.9□□□□□ -0.34
USB1-208ENST00000563207 DUX4L4P0CJ87 422 aa12.9□□□□□ -0.34
USB1-208ENST00000563207 DUX4L5P0CJ88 424 aa12.9□□□□□ -0.34
USB1-208ENST00000563207 DUX4L6P0CJ89 424 aa12.9□□□□□ -0.34
USB1-208ENST00000563207 DUX4L7P0CJ90 424 aa12.9□□□□□ -0.34
USB1-208ENST00000563207 GTF2F2P13984 249 aa12.9□□□□□ -0.34
USB1-208ENST00000563207 LMO1P25800 156 aa12.9□□□□□ -0.34
USB1-208ENST00000563207 HTR2CP28335 458 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms