RNA–Protein interactions for RNA: ENST00000562913.5

KLHDC4-210, Transcript of kelch domain containing 4, humanhuman

TSL 3

Gene KLHDC4, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-210ENST00000562913 ZNF649Q9BS31 505 aa13.25□□□□□ -0.29
KLHDC4-210ENST00000562913 NPFFR1Q9GZQ6 430 aa13.25□□□□□ -0.29
KLHDC4-210ENST00000562913 ZCCHC4Q9H5U6 513 aa13.25□□□□□ -0.29
KLHDC4-210ENST00000562913 RANBP3Q9H6Z4 567 aaPredicted RBP13.25□□□□□ -0.29
KLHDC4-210ENST00000562913 NEK6Q9HC98 313 aa13.25□□□□□ -0.29
KLHDC4-210ENST00000562913 EXOSC4Q9NPD3 245 aaKnown RBP13.25□□□□□ -0.29
KLHDC4-210ENST00000562913 FAM118AQ9NWS6 357 aa13.25□□□□□ -0.29
KLHDC4-210ENST00000562913 FOXJ3Q9UPW0 622 aa13.25□□□□□ -0.29
KLHDC4-210ENST00000562913 KIAA2026Q5HYC2 2103 aa13.24□□□□□ -0.29
KLHDC4-210ENST00000562913 SH2D1BO14796 132 aa13.24□□□□□ -0.29
KLHDC4-210ENST00000562913 MMP23AO75900 390 aa13.24□□□□□ -0.29
KLHDC4-210ENST00000562913 KDM4BO94953 1096 aa13.24□□□□□ -0.29
KLHDC4-210ENST00000562913 ZFPL1O95159 310 aa13.24□□□□□ -0.29
KLHDC4-210ENST00000562913 OR2H2O95918 312 aa13.24□□□□□ -0.29
KLHDC4-210ENST00000562913 RAB40BQ12829 278 aa13.24□□□□□ -0.29
KLHDC4-210ENST00000562913 C2orf68Q2NKX9 166 aa13.24□□□□□ -0.29
KLHDC4-210ENST00000562913 CCBE1Q6UXH8 406 aaPredicted RBP13.24□□□□□ -0.29
KLHDC4-210ENST00000562913 Q6ZTK2 550 aa13.24□□□□□ -0.29
KLHDC4-210ENST00000562913 TRAPPC6BQ86SZ2 158 aa13.24□□□□□ -0.29
KLHDC4-210ENST00000562913 TMEM219Q86XT9 240 aa13.24□□□□□ -0.29
KLHDC4-210ENST00000562913 KLHDC1Q8N7A1 406 aa13.24□□□□□ -0.29
KLHDC4-210ENST00000562913 C11orf44Q8N8P7 122 aa13.24□□□□□ -0.29
KLHDC4-210ENST00000562913 OR52I1Q8NGK6 324 aa13.24□□□□□ -0.29
KLHDC4-210ENST00000562913 FAM110DQ8TAY7 271 aaPredicted RBP13.24□□□□□ -0.29
KLHDC4-210ENST00000562913 PDCD1LG2Q9BQ51 273 aa13.24□□□□□ -0.29
KLHDC4-210ENST00000562913 ABCB10Q9NRK6 738 aa13.24□□□□□ -0.29
KLHDC4-210ENST00000562913 INPP5EQ9NRR6 644 aa13.24□□□□□ -0.29
KLHDC4-210ENST00000562913 TCF19Q9Y242 345 aa13.24□□□□□ -0.29
KLHDC4-210ENST00000562913 HILPDAQ9Y5L2 63 aa13.24□□□□□ -0.29
KLHDC4-210ENST00000562913 SESN1Q9Y6P5 492 aa13.24□□□□□ -0.29
KLHDC4-210ENST00000562913 IGHV2-26A0A0B4J1V2 119 aa13.23□□□□□ -0.29
KLHDC4-210ENST00000562913 TMEM212A6NML5 194 aa13.23□□□□□ -0.29
KLHDC4-210ENST00000562913 HCKP08631 526 aa13.23□□□□□ -0.29
KLHDC4-210ENST00000562913 JUNBP17275 347 aaPredicted RBP13.23□□□□□ -0.29
KLHDC4-210ENST00000562913 ERP29P30040 261 aaKnown RBP13.23□□□□□ -0.29
KLHDC4-210ENST00000562913 SCN1BQ07699 218 aa13.23□□□□□ -0.29
KLHDC4-210ENST00000562913 HERPUD1Q15011 391 aa13.23□□□□□ -0.29
KLHDC4-210ENST00000562913 PDLIM3Q53GG5 364 aaPredicted RBP13.23□□□□□ -0.29
KLHDC4-210ENST00000562913 C11orf88Q6PI97 169 aa13.23□□□□□ -0.29
KLHDC4-210ENST00000562913 SERPINA12Q8IW75 414 aa13.23□□□□□ -0.29
KLHDC4-210ENST00000562913 OR5D14Q8NGL3 314 aa13.23□□□□□ -0.29
KLHDC4-210ENST00000562913 OR5AK2Q8NH90 309 aa13.23□□□□□ -0.29
KLHDC4-210ENST00000562913 RPS4Y2Q8TD47 263 aa13.23□□□□□ -0.29
KLHDC4-210ENST00000562913 APH1BQ8WW43 257 aa13.23□□□□□ -0.29
KLHDC4-210ENST00000562913 COMMD4Q9H0A8 199 aa13.23□□□□□ -0.29
KLHDC4-210ENST00000562913 TMEM133Q9H2Q1 129 aa13.23□□□□□ -0.29
KLHDC4-210ENST00000562913 UBE2J1Q9Y385 318 aaPredicted RBP13.23□□□□□ -0.29
KLHDC4-210ENST00000562913 RPL36Q9Y3U8 105 aaKnown RBP13.23□□□□□ -0.29
KLHDC4-210ENST00000562913 PCDHGB5Q9Y5G0 923 aa13.23□□□□□ -0.29
KLHDC4-210ENST00000562913 A6NDX4 124 aa13.22□□□□□ -0.29
KLHDC4-210ENST00000562913 EBAG9O00559 213 aa13.22□□□□□ -0.29
KLHDC4-210ENST00000562913 SULT1B1O43704 296 aa13.22□□□□□ -0.29
KLHDC4-210ENST00000562913 BAG2O95816 211 aa13.22□□□□□ -0.29
KLHDC4-210ENST00000562913 CSF1P09603 554 aa13.22□□□□□ -0.29
KLHDC4-210ENST00000562913 TMEM225BP0DP42 221 aa13.22□□□□□ -0.29
KLHDC4-210ENST00000562913 VSIG10L2P0DP72 767 aa13.22□□□□□ -0.29
KLHDC4-210ENST00000562913 ZNF44P15621 663 aa13.22□□□□□ -0.29
KLHDC4-210ENST00000562913 GLIPR1P48060 266 aa13.22□□□□□ -0.29
KLHDC4-210ENST00000562913 GBX2P52951 348 aaPredicted RBP13.22□□□□□ -0.29
KLHDC4-210ENST00000562913 AESQ08117 197 aa13.22□□□□□ -0.29
KLHDC4-210ENST00000562913 IL18R1Q13478 541 aa13.22□□□□□ -0.29
KLHDC4-210ENST00000562913 HABP2Q14520 560 aaPredicted RBP13.22□□□□□ -0.29
KLHDC4-210ENST00000562913 KISS1Q15726 138 aa13.22□□□□□ -0.29
KLHDC4-210ENST00000562913 SMN1Q16637 294 aaKnown RBP13.22□□□□□ -0.29
KLHDC4-210ENST00000562913 MINOS1Q5TGZ0 78 aa13.22□□□□□ -0.29
KLHDC4-210ENST00000562913 BAIAP2L2Q6UXY1 529 aa13.22□□□□□ -0.29
KLHDC4-210ENST00000562913 SAXO1Q8IYX7 474 aa13.22□□□□□ -0.29
KLHDC4-210ENST00000562913 PARP16Q8N5Y8 322 aa13.22□□□□□ -0.29
KLHDC4-210ENST00000562913 NDNFQ8TB73 568 aa13.22□□□□□ -0.29
KLHDC4-210ENST00000562913 TSEN15Q8WW01 171 aaKnown RBP13.22□□□□□ -0.29
KLHDC4-210ENST00000562913 CLEC7AQ9BXN2 247 aa13.22□□□□□ -0.29
KLHDC4-210ENST00000562913 ZNF702PQ9H963 129 aa13.22□□□□□ -0.29
KLHDC4-210ENST00000562913 MRPS18AQ9NVS2 196 aaKnown RBP13.22□□□□□ -0.29
KLHDC4-210ENST00000562913 DHDHQ9UQ10 334 aa13.22□□□□□ -0.29
KLHDC4-210ENST00000562913 MINOS1-NBL1R4GNA1 71 aa13.22□□□□□ -0.29
KLHDC4-210ENST00000562913 TRGV10A0A0A0MS01 117 aa13.21□□□□□ -0.29
KLHDC4-210ENST00000562913 A0A0G2JK05 382 aa13.21□□□□□ -0.29
KLHDC4-210ENST00000562913 CCDC159P0C7I6 412 aa13.21□□□□□ -0.29
KLHDC4-210ENST00000562913 LIMS3P0CW19 117 aa13.21□□□□□ -0.29
KLHDC4-210ENST00000562913 LIMS4P0CW20 117 aa13.21□□□□□ -0.29
KLHDC4-210ENST00000562913 LMO1P25800 156 aa13.21□□□□□ -0.29
KLHDC4-210ENST00000562913 GTF2A1P52655 376 aaPredicted RBP13.21□□□□□ -0.29
KLHDC4-210ENST00000562913 ZP1P60852 638 aa13.21□□□□□ -0.29
KLHDC4-210ENST00000562913 SLC34A1Q06495 639 aa13.21□□□□□ -0.29
KLHDC4-210ENST00000562913 MRPL28Q13084 256 aaKnown RBP13.21□□□□□ -0.29
KLHDC4-210ENST00000562913 KLHL22Q53GT1 634 aa13.21□□□□□ -0.29
KLHDC4-210ENST00000562913 PRAMEF5Q5TYX0 476 aa13.21□□□□□ -0.29
KLHDC4-210ENST00000562913 LPCAT4Q643R3 524 aa13.21□□□□□ -0.29
KLHDC4-210ENST00000562913 Q6P435 159 aa13.21□□□□□ -0.29
KLHDC4-210ENST00000562913 CDCA4Q9BXL8 241 aa13.21□□□□□ -0.29
KLHDC4-210ENST00000562913 RHOFQ9HBH0 211 aa13.21□□□□□ -0.29
KLHDC4-210ENST00000562913 ING3Q9NXR8 418 aa13.21□□□□□ -0.29
KLHDC4-210ENST00000562913 PITPNC1Q9UKF7 332 aa13.21□□□□□ -0.29
KLHDC4-210ENST00000562913 FUOMA2VDF0 154 aa13.2□□□□□ -0.3
KLHDC4-210ENST00000562913 F2RL2O00254 374 aa13.2□□□□□ -0.3
KLHDC4-210ENST00000562913 SLC33A1O00400 549 aaPredicted RBP13.2□□□□□ -0.3
KLHDC4-210ENST00000562913 DEGS1O15121 323 aa13.2□□□□□ -0.3
KLHDC4-210ENST00000562913 WBP4O75554 376 aaKnown RBP13.2□□□□□ -0.3
KLHDC4-210ENST00000562913 ALX3O95076 343 aa13.2□□□□□ -0.3
KLHDC4-210ENST00000562913 RPSAP08865 295 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms