RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 GCDHQ92947 438 aaPredicted RBP8.7□□□□□ -1.02
USP3-219ENST00000561326 VRK1Q99986 396 aaPredicted RBP8.7□□□□□ -1.02
USP3-219ENST00000561326 SPOCK3Q9BQ16 436 aa8.7□□□□□ -1.02
USP3-219ENST00000561326 CMSS1Q9BQ75 279 aaKnown RBP8.7□□□□□ -1.02
USP3-219ENST00000561326 CHST6Q9GZX3 395 aa8.7□□□□□ -1.02
USP3-219ENST00000561326 RAB1BQ9H0U4 201 aa8.7□□□□□ -1.02
USP3-219ENST00000561326 RIMS4Q9H426 269 aaPredicted RBP8.7□□□□□ -1.02
USP3-219ENST00000561326 SAP30LQ9HAJ7 183 aa8.7□□□□□ -1.02
USP3-219ENST00000561326 SEBOXQ9HB31 216 aaPredicted RBP8.7□□□□□ -1.02
USP3-219ENST00000561326 GCM1Q9NP62 436 aa8.7□□□□□ -1.02
USP3-219ENST00000561326 CBLN4Q9NTU7 201 aa8.7□□□□□ -1.02
USP3-219ENST00000561326 DNAJB11Q9UBS4 358 aa8.7□□□□□ -1.02
USP3-219ENST00000561326 TBC1D24Q9ULP9 559 aa8.7□□□□□ -1.02
USP3-219ENST00000561326 EDARQ9UNE0 448 aa8.7□□□□□ -1.02
USP3-219ENST00000561326 KCNK7Q9Y2U2 307 aa8.7□□□□□ -1.02
USP3-219ENST00000561326 UBE2QL1A1L167 161 aa8.69□□□□□ -1.02
USP3-219ENST00000561326 MEIS3P1A6NDR6 274 aa8.69□□□□□ -1.02
USP3-219ENST00000561326 A6NNC1 897 aa8.69□□□□□ -1.02
USP3-219ENST00000561326 POM121CA8CG34 1229 aa8.69□□□□□ -1.02
USP3-219ENST00000561326 SRRM5B3KS81 715 aa8.69□□□□□ -1.02
USP3-219ENST00000561326 ZNF736B4DX44 427 aaPredicted RBP8.69□□□□□ -1.02
USP3-219ENST00000561326 C19orf84I3L1E1 186 aa8.69□□□□□ -1.02
USP3-219ENST00000561326 LHBP01229 141 aa8.69□□□□□ -1.02
USP3-219ENST00000561326 TBPP20226 339 aa8.69□□□□□ -1.02
USP3-219ENST00000561326 MDH2P40926 338 aaKnown RBP8.69□□□□□ -1.02
USP3-219ENST00000561326 PPOXP50336 477 aa8.69□□□□□ -1.02
USP3-219ENST00000561326 KLF9Q13886 244 aaPredicted RBP8.69□□□□□ -1.02
USP3-219ENST00000561326 MEF2DQ14814 521 aa8.69□□□□□ -1.02
USP3-219ENST00000561326 OXA1LQ15070 435 aa8.69□□□□□ -1.02
USP3-219ENST00000561326 PDCD1Q15116 288 aa8.69□□□□□ -1.02
USP3-219ENST00000561326 STEAP1BQ6NZ63 245 aa8.69□□□□□ -1.02
USP3-219ENST00000561326 DCDC5Q6ZRR9 648 aa8.69□□□□□ -1.02
USP3-219ENST00000561326 CENPSQ8N2Z9 138 aa8.69□□□□□ -1.02
USP3-219ENST00000561326 BOLLQ8N9W6 283 aaKnown RBP8.69□□□□□ -1.02
USP3-219ENST00000561326 SULT4A1Q9BR01 284 aa8.69□□□□□ -1.02
USP3-219ENST00000561326 ST6GALNAC5Q9BVH7 336 aa8.69□□□□□ -1.02
USP3-219ENST00000561326 C11orf54Q9H0W9 315 aaPredicted RBP8.69□□□□□ -1.02
USP3-219ENST00000561326 RCC2Q9P258 522 aaKnown RBP8.69□□□□□ -1.02
USP3-219ENST00000561326 COPZ2Q9P299 210 aa8.69□□□□□ -1.02
USP3-219ENST00000561326 OR14J1Q9UGF5 321 aa8.69□□□□□ -1.02
USP3-219ENST00000561326 AK3Q9UIJ7 227 aa8.69□□□□□ -1.02
USP3-219ENST00000561326 ELF5Q9UKW6 265 aaPredicted RBP8.69□□□□□ -1.02
USP3-219ENST00000561326 RFPL4AA6NLU0 287 aa8.68□□□□□ -1.02
USP3-219ENST00000561326 RFPL4AL1F8VTS6 287 aa8.68□□□□□ -1.02
USP3-219ENST00000561326 SSX5O60225 188 aa8.68□□□□□ -1.02
USP3-219ENST00000561326 RAB3DO95716 219 aa8.68□□□□□ -1.02
USP3-219ENST00000561326 OR2H2O95918 312 aa8.68□□□□□ -1.02
USP3-219ENST00000561326 HAND1O96004 215 aa8.68□□□□□ -1.02
USP3-219ENST00000561326 IFNA6P05013 189 aa8.68□□□□□ -1.02
USP3-219ENST00000561326 NAT1P18440 290 aa8.68□□□□□ -1.02
USP3-219ENST00000561326 AMY2BP19961 511 aa8.68□□□□□ -1.02
USP3-219ENST00000561326 DTYMKP23919 212 aa8.68□□□□□ -1.02
USP3-219ENST00000561326 LMO1P25800 156 aa8.68□□□□□ -1.02
USP3-219ENST00000561326 OR3A3P47888 321 aa8.68□□□□□ -1.02
USP3-219ENST00000561326 TAS2R46P59540 309 aa8.68□□□□□ -1.02
USP3-219ENST00000561326 MICBQ29980 383 aa8.68□□□□□ -1.02
USP3-219ENST00000561326 HFEQ30201 348 aa8.68□□□□□ -1.02
USP3-219ENST00000561326 ACTBL2Q562R1 376 aa8.68□□□□□ -1.02
USP3-219ENST00000561326 PAN3Q58A45 887 aaKnown RBP8.68□□□□□ -1.02
USP3-219ENST00000561326 OLFML2AQ68BL7 652 aa8.68□□□□□ -1.02
USP3-219ENST00000561326 Q6P435 159 aa8.68□□□□□ -1.02
USP3-219ENST00000561326 BRICD5Q6PL45 260 aa8.68□□□□□ -1.02
USP3-219ENST00000561326 PLET1Q6UQ28 207 aa8.68□□□□□ -1.02
USP3-219ENST00000561326 ZNF782Q6ZMW2 699 aaPredicted RBP8.68□□□□□ -1.02
USP3-219ENST00000561326 GDPD3Q7L5L3 318 aa8.68□□□□□ -1.02
USP3-219ENST00000561326 NRARPQ7Z6K4 114 aa8.68□□□□□ -1.02
USP3-219ENST00000561326 HOGA1Q86XE5 327 aa8.68□□□□□ -1.02
USP3-219ENST00000561326 ZCCHC24Q8N2G6 241 aaKnown RBP8.68□□□□□ -1.02
USP3-219ENST00000561326 SUMF2Q8NBJ7 301 aa8.68□□□□□ -1.02
USP3-219ENST00000561326 DUSP18Q8NEJ0 188 aa8.68□□□□□ -1.02
USP3-219ENST00000561326 PPP1R35Q8TAP8 253 aa8.68□□□□□ -1.02
USP3-219ENST00000561326 RDH5Q92781 318 aa8.68□□□□□ -1.02
USP3-219ENST00000561326 DPCDQ9BVM2 203 aaPredicted RBP8.68□□□□□ -1.02
USP3-219ENST00000561326 CACNG6Q9BXT2 260 aa8.68□□□□□ -1.02
USP3-219ENST00000561326 WDR13Q9H1Z4 485 aa8.68□□□□□ -1.02
USP3-219ENST00000561326 DPAGT1Q9H3H5 408 aa8.68□□□□□ -1.02
USP3-219ENST00000561326 CHMP1AQ9HD42 196 aaPredicted RBP8.68□□□□□ -1.02
USP3-219ENST00000561326 HRASLSQ9HDD0 168 aa8.68□□□□□ -1.02
USP3-219ENST00000561326 C12orf4Q9NQ89 552 aa8.68□□□□□ -1.02
USP3-219ENST00000561326 MCUBQ9NWR8 336 aa8.68□□□□□ -1.02
USP3-219ENST00000561326 TREM2Q9NZC2 230 aa8.68□□□□□ -1.02
USP3-219ENST00000561326 NLKQ9UBE8 527 aa8.68□□□□□ -1.02
USP3-219ENST00000561326 WIPI2Q9Y4P8 454 aa8.68□□□□□ -1.02
USP3-219ENST00000561326 USP9XQ93008 2570 aaPredicted RBP8.68□□□□□ -1.02
USP3-219ENST00000561326 DSCAML1Q8TD84 2053 aa8.68□□□□□ -1.02
USP3-219ENST00000561326 UBR5O95071 2799 aaPredicted RBP8.67□□□□□ -1.02
USP3-219ENST00000561326 TRAV38-1A0A0B4J264 116 aa8.67□□□□□ -1.02
USP3-219ENST00000561326 OR2AT4A6NND4 320 aa8.67□□□□□ -1.02
USP3-219ENST00000561326 DISC1C4P0D8 188 aa8.67□□□□□ -1.02
USP3-219ENST00000561326 J3QKU1 62 aa8.67□□□□□ -1.02
USP3-219ENST00000561326 SIRPB1O00241 398 aa8.67□□□□□ -1.02
USP3-219ENST00000561326 WNT9BO14905 357 aa8.67□□□□□ -1.02
USP3-219ENST00000561326 CD3DP04234 171 aa8.67□□□□□ -1.02
USP3-219ENST00000561326 MUC1P15941 1255 aaPredicted RBP8.67□□□□□ -1.02
USP3-219ENST00000561326 HLA-DMAP28067 261 aa8.67□□□□□ -1.02
USP3-219ENST00000561326 PRDX2P32119 198 aa8.67□□□□□ -1.02
USP3-219ENST00000561326 GABRA2P47869 451 aa8.67□□□□□ -1.02
USP3-219ENST00000561326 KCNJ3P48549 501 aa8.67□□□□□ -1.02
USP3-219ENST00000561326 YLPM1P49750 1951 aaKnown RBP8.67□□□□□ -1.02
USP3-219ENST00000561326 SRSF7Q16629 238 aaKnown RBP eCLIP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms