RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 KIR3DL2P43630 455 aa7.39□□□□□ -1.23
HERC1-210ENST00000560897 PRRX1P54821 245 aa7.39□□□□□ -1.23
HERC1-210ENST00000560897 ZNF121P58317 390 aaPredicted RBP7.39□□□□□ -1.23
HERC1-210ENST00000560897 HNF4GQ14541 408 aa7.39□□□□□ -1.23
HERC1-210ENST00000560897 ATP6AP1Q15904 470 aa7.39□□□□□ -1.23
HERC1-210ENST00000560897 MICAQ29983 383 aa7.39□□□□□ -1.23
HERC1-210ENST00000560897 CEP78Q5JTW2 689 aa7.39□□□□□ -1.23
HERC1-210ENST00000560897 AMIGO2Q86SJ2 522 aa7.39□□□□□ -1.23
HERC1-210ENST00000560897 GTSCR1Q86UQ5 136 aa7.39□□□□□ -1.23
HERC1-210ENST00000560897 Q8N1Y9 231 aa7.39□□□□□ -1.23
HERC1-210ENST00000560897 OR10G2Q8NGC3 310 aa7.39□□□□□ -1.23
HERC1-210ENST00000560897 OR56B4Q8NH76 319 aa7.39□□□□□ -1.23
HERC1-210ENST00000560897 FANK1Q8TC84 345 aa7.39□□□□□ -1.23
HERC1-210ENST00000560897 TOMM40LQ969M1 308 aa7.39□□□□□ -1.23
HERC1-210ENST00000560897 NRBF2Q96F24 287 aa7.39□□□□□ -1.23
HERC1-210ENST00000560897 CENPNQ96H22 339 aaPredicted RBP7.39□□□□□ -1.23
HERC1-210ENST00000560897 ZNF488Q96MN9 340 aa7.39□□□□□ -1.23
HERC1-210ENST00000560897 FGF23Q9GZV9 251 aaPredicted RBP7.39□□□□□ -1.23
HERC1-210ENST00000560897 KIAA1456Q9P272 454 aa7.39□□□□□ -1.23
HERC1-210ENST00000560897 ENOPH1Q9UHY7 261 aa7.39□□□□□ -1.23
HERC1-210ENST00000560897 GLS2Q9UI32 602 aa7.39□□□□□ -1.23
HERC1-210ENST00000560897 VSIG4Q9Y279 399 aa7.39□□□□□ -1.23
HERC1-210ENST00000560897 POLDIP2Q9Y2S7 368 aa7.39□□□□□ -1.23
HERC1-210ENST00000560897 FAM172BPA6NC97 362 aa7.38□□□□□ -1.23
HERC1-210ENST00000560897 UNC119BA6NIH7 251 aa7.38□□□□□ -1.23
HERC1-210ENST00000560897 NCBP2LA6PVI3 153 aaKnown RBP7.38□□□□□ -1.23
HERC1-210ENST00000560897 H3BN98 237 aa7.38□□□□□ -1.23
HERC1-210ENST00000560897 BUB1B-PAK6H3BSN5 160 aa7.38□□□□□ -1.23
HERC1-210ENST00000560897 FFAR1O14842 300 aa7.38□□□□□ -1.23
HERC1-210ENST00000560897 SEMG1P04279 462 aa7.38□□□□□ -1.23
HERC1-210ENST00000560897 OR5H8P0DN80 308 aa7.38□□□□□ -1.23
HERC1-210ENST00000560897 HIST1H1CP16403 213 aaKnown RBP7.38□□□□□ -1.23
HERC1-210ENST00000560897 SLC6A6P31641 620 aa7.38□□□□□ -1.23
HERC1-210ENST00000560897 HMGA2P52926 109 aa7.38□□□□□ -1.23
HERC1-210ENST00000560897 PSMA6P60900 246 aaKnown RBP7.38□□□□□ -1.23
HERC1-210ENST00000560897 PPP1R8Q12972 351 aaKnown RBP7.38□□□□□ -1.23
HERC1-210ENST00000560897 HLA-DRB5Q30154 266 aa7.38□□□□□ -1.23
HERC1-210ENST00000560897 CEACAM21Q3KPI0 293 aa7.38□□□□□ -1.23
HERC1-210ENST00000560897 ASPHD1Q5U4P2 390 aa7.38□□□□□ -1.23
HERC1-210ENST00000560897 RPL13AP3Q6NVV1 102 aa7.38□□□□□ -1.23
HERC1-210ENST00000560897 TCF23Q7RTU1 214 aa7.38□□□□□ -1.23
HERC1-210ENST00000560897 ANKRD13BQ86YJ7 626 aa7.38□□□□□ -1.23
HERC1-210ENST00000560897 OR8H2Q8N162 312 aa7.38□□□□□ -1.23
HERC1-210ENST00000560897 OR52L1Q8NGH7 329 aa7.38□□□□□ -1.23
HERC1-210ENST00000560897 ARPC1AQ92747 370 aa7.38□□□□□ -1.23
HERC1-210ENST00000560897 ANAPC16Q96DE5 110 aa7.38□□□□□ -1.23
HERC1-210ENST00000560897 UBE2E2Q96LR5 201 aa7.38□□□□□ -1.23
HERC1-210ENST00000560897 OR5B12Q96R08 314 aa7.38□□□□□ -1.23
HERC1-210ENST00000560897 RSRP1Q9BUV0 290 aa7.38□□□□□ -1.23
HERC1-210ENST00000560897 C9orf16Q9BUW7 83 aa7.38□□□□□ -1.23
HERC1-210ENST00000560897 ELOVL1Q9BW60 279 aa7.38□□□□□ -1.23
HERC1-210ENST00000560897 IFT27Q9BW83 186 aa7.38□□□□□ -1.23
HERC1-210ENST00000560897 HIPK2Q9H2X6 1198 aa7.38□□□□□ -1.23
HERC1-210ENST00000560897 VCX3BQ9H321 246 aa7.38□□□□□ -1.23
HERC1-210ENST00000560897 OR51J1Q9H342 316 aa7.38□□□□□ -1.23
HERC1-210ENST00000560897 GAL3ST2Q9H3Q3 398 aa7.38□□□□□ -1.23
HERC1-210ENST00000560897 CEPT1Q9Y6K0 416 aa7.38□□□□□ -1.23
HERC1-210ENST00000560897 TRBV4-1A0A0J9YWV2 114 aa7.37□□□□□ -1.23
HERC1-210ENST00000560897 GASTP01350 101 aa7.37□□□□□ -1.23
HERC1-210ENST00000560897 IGKV1D-33P01593 117 aa7.37□□□□□ -1.23
HERC1-210ENST00000560897 IGKV1-33P01594 117 aa7.37□□□□□ -1.23
HERC1-210ENST00000560897 IGHG4P01861 327 aa7.37□□□□□ -1.23
HERC1-210ENST00000560897 ACKR3P25106 362 aa7.37□□□□□ -1.23
HERC1-210ENST00000560897 PYCR1P32322 319 aa7.37□□□□□ -1.23
HERC1-210ENST00000560897 HAAOP46952 286 aa7.37□□□□□ -1.23
HERC1-210ENST00000560897 GNB1P62873 340 aa7.37□□□□□ -1.23
HERC1-210ENST00000560897 RCN1Q15293 331 aa7.37□□□□□ -1.23
HERC1-210ENST00000560897 PRAMEF5Q5TYX0 476 aa7.37□□□□□ -1.23
HERC1-210ENST00000560897 PLCXD3Q63HM9 321 aa7.37□□□□□ -1.23
HERC1-210ENST00000560897 CATSPERDQ86XM0 798 aa7.37□□□□□ -1.23
HERC1-210ENST00000560897 BATF2Q8N1L9 274 aa7.37□□□□□ -1.23
HERC1-210ENST00000560897 PQLC1Q8N2U9 271 aa7.37□□□□□ -1.23
HERC1-210ENST00000560897 LILRB2Q8N423 598 aa7.37□□□□□ -1.23
HERC1-210ENST00000560897 AQP11Q8NBQ7 271 aa7.37□□□□□ -1.23
HERC1-210ENST00000560897 OR5A2Q8NGI9 324 aa7.37□□□□□ -1.23
HERC1-210ENST00000560897 OR2T4Q8NH00 348 aa7.37□□□□□ -1.23
HERC1-210ENST00000560897 DNAJC9Q8WXX5 260 aa7.37□□□□□ -1.23
HERC1-210ENST00000560897 DLX4Q92988 240 aaPredicted RBP7.37□□□□□ -1.23
HERC1-210ENST00000560897 OSBPL10Q9BXB5 764 aa7.37□□□□□ -1.23
HERC1-210ENST00000560897 NIPAL2Q9H841 368 aa7.37□□□□□ -1.23
HERC1-210ENST00000560897 GNB4Q9HAV0 340 aa7.37□□□□□ -1.23
HERC1-210ENST00000560897 STUB1Q9UNE7 303 aa7.37□□□□□ -1.23
HERC1-210ENST00000560897 AMMECR1Q9Y4X0 333 aaPredicted RBP7.37□□□□□ -1.23
HERC1-210ENST00000560897 COMMD3-BMI1R4GMX3 469 aa7.37□□□□□ -1.23
HERC1-210ENST00000560897 MAGEA13PA6NCF6 341 aa7.36□□□□□ -1.23
HERC1-210ENST00000560897 FAM90A18PA6NE21 464 aa7.36□□□□□ -1.23
HERC1-210ENST00000560897 FAM90A16PA6NEW6 464 aa7.36□□□□□ -1.23
HERC1-210ENST00000560897 FAM90A20PA6NIJ5 464 aa7.36□□□□□ -1.23
HERC1-210ENST00000560897 SAC3D1A6NKF1 404 aa7.36□□□□□ -1.23
HERC1-210ENST00000560897 LINC01548A6NM66 108 aa7.36□□□□□ -1.23
HERC1-210ENST00000560897 FAM90A9PA6NNJ1 464 aa7.36□□□□□ -1.23
HERC1-210ENST00000560897 FAM90A12PA8MX19 464 aa7.36□□□□□ -1.23
HERC1-210ENST00000560897 FAM90A5PA8MXJ8 464 aa7.36□□□□□ -1.23
HERC1-210ENST00000560897 LINC01619G3V211 115 aa7.36□□□□□ -1.23
HERC1-210ENST00000560897 I3L521 148 aa7.36□□□□□ -1.23
HERC1-210ENST00000560897 J3QT63 122 aa7.36□□□□□ -1.23
HERC1-210ENST00000560897 ARPC3O15145 178 aa7.36□□□□□ -1.23
HERC1-210ENST00000560897 BRI3O95415 125 aa7.36□□□□□ -1.23
HERC1-210ENST00000560897 IGLV1-47P01700 117 aa7.36□□□□□ -1.23
HERC1-210ENST00000560897 FAM90A15PP0C7V4 464 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms