RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 CHPT1Q8WUD6 406 aa7.93□□□□□ -1.14
TPM1-225ENST00000560679 ZNRF4Q8WWF5 429 aa7.93□□□□□ -1.14
TPM1-225ENST00000560679 OTULINQ96BN8 352 aa7.93□□□□□ -1.14
TPM1-225ENST00000560679 PAPOLGQ9BWT3 736 aaKnown RBP7.93□□□□□ -1.14
TPM1-225ENST00000560679 C6orf62Q9GZU0 229 aaPredicted RBP7.93□□□□□ -1.14
TPM1-225ENST00000560679 MED20Q9H944 212 aa7.93□□□□□ -1.14
TPM1-225ENST00000560679 ERVK13-1Q9NX77 482 aa7.93□□□□□ -1.14
TPM1-225ENST00000560679 NLKQ9UBE8 527 aa7.93□□□□□ -1.14
TPM1-225ENST00000560679 KCNG2Q9UJ96 466 aa7.93□□□□□ -1.14
TPM1-225ENST00000560679 RHBDD3Q9Y3P4 386 aa7.93□□□□□ -1.14
TPM1-225ENST00000560679 LRP12Q9Y561 859 aa7.93□□□□□ -1.14
TPM1-225ENST00000560679 ALMS1Q8TCU4 4167 aa7.92□□□□□ -1.14
TPM1-225ENST00000560679 TVP23AA6NH52 213 aa7.92□□□□□ -1.14
TPM1-225ENST00000560679 ARPC3O15145 178 aa7.92□□□□□ -1.14
TPM1-225ENST00000560679 SULT1C4O75897 302 aa7.92□□□□□ -1.14
TPM1-225ENST00000560679 RENP00797 406 aa7.92□□□□□ -1.14
TPM1-225ENST00000560679 IL1AP01583 271 aa7.92□□□□□ -1.14
TPM1-225ENST00000560679 PSG2P11465 335 aa7.92□□□□□ -1.14
TPM1-225ENST00000560679 CCL3L1P16619 93 aa7.92□□□□□ -1.14
TPM1-225ENST00000560679 SLC2A5P22732 501 aa7.92□□□□□ -1.14
TPM1-225ENST00000560679 CD40LGP29965 261 aa7.92□□□□□ -1.14
TPM1-225ENST00000560679 PYCR1P32322 319 aa7.92□□□□□ -1.14
TPM1-225ENST00000560679 S100A5P33763 92 aa7.92□□□□□ -1.14
TPM1-225ENST00000560679 GABRA2P47869 451 aa7.92□□□□□ -1.14
TPM1-225ENST00000560679 PPP5CP53041 499 aa7.92□□□□□ -1.14
TPM1-225ENST00000560679 BDH1Q02338 343 aa7.92□□□□□ -1.14
TPM1-225ENST00000560679 CRMP1Q14194 572 aa7.92□□□□□ -1.14
TPM1-225ENST00000560679 ZNF273Q14593 569 aa7.92□□□□□ -1.14
TPM1-225ENST00000560679 DMRTC1Q5HYR2 192 aa7.92□□□□□ -1.14
TPM1-225ENST00000560679 LCN1P1Q5VSP4 162 aa7.92□□□□□ -1.14
TPM1-225ENST00000560679 TMEM200BQ69YZ2 307 aa7.92□□□□□ -1.14
TPM1-225ENST00000560679 ZNF322Q6U7Q0 402 aaPredicted RBP7.92□□□□□ -1.14
TPM1-225ENST00000560679 TMPRSS11AQ6ZMR5 421 aa7.92□□□□□ -1.14
TPM1-225ENST00000560679 DCXRQ7Z4W1 244 aa7.92□□□□□ -1.14
TPM1-225ENST00000560679 LHFPL3Q86UP9 236 aa7.92□□□□□ -1.14
TPM1-225ENST00000560679 ACBD7Q8N6N7 88 aa7.92□□□□□ -1.14
TPM1-225ENST00000560679 MINDY2Q8NBR6 621 aa7.92□□□□□ -1.14
TPM1-225ENST00000560679 HPSE2Q8WWQ2 592 aa7.92□□□□□ -1.14
TPM1-225ENST00000560679 DPF1Q92782 380 aa7.92□□□□□ -1.14
TPM1-225ENST00000560679 FOXRED1Q96CU9 486 aaPredicted RBP7.92□□□□□ -1.14
TPM1-225ENST00000560679 REEP6Q96HR9 211 aa7.92□□□□□ -1.14
TPM1-225ENST00000560679 LYZL4Q96KX0 146 aa7.92□□□□□ -1.14
TPM1-225ENST00000560679 ZNF649Q9BS31 505 aa7.92□□□□□ -1.14
TPM1-225ENST00000560679 GPR61Q9BZJ8 451 aa7.92□□□□□ -1.14
TPM1-225ENST00000560679 HEXA-AS1Q9H8Q6 139 aa7.92□□□□□ -1.14
TPM1-225ENST00000560679 TXNL4BQ9NX01 149 aaKnown RBP7.92□□□□□ -1.14
TPM1-225ENST00000560679 ZNF319Q9P2F9 582 aa7.92□□□□□ -1.14
TPM1-225ENST00000560679 PITPNC1Q9UKF7 332 aa7.92□□□□□ -1.14
TPM1-225ENST00000560679 LSM4Q9Y4Z0 139 aaKnown RBP7.92□□□□□ -1.14
TPM1-225ENST00000560679 N6AMT1Q9Y5N5 214 aa7.92□□□□□ -1.14
TPM1-225ENST00000560679 hCG_2014768A0A024R1R8 64 aa7.91□□□□□ -1.14
TPM1-225ENST00000560679 TRDV1A0A1B0GX56 115 aa7.91□□□□□ -1.14
TPM1-225ENST00000560679 TBX1O43435 398 aa7.91□□□□□ -1.14
TPM1-225ENST00000560679 IDH3BO43837 385 aa7.91□□□□□ -1.14
TPM1-225ENST00000560679 RHBDL1O75783 438 aa7.91□□□□□ -1.14
TPM1-225ENST00000560679 LALBAP00709 142 aa7.91□□□□□ -1.14
TPM1-225ENST00000560679 ALDOBP05062 364 aa7.91□□□□□ -1.14
TPM1-225ENST00000560679 ACKR3P25106 362 aa7.91□□□□□ -1.14
TPM1-225ENST00000560679 LMO1P25800 156 aa7.91□□□□□ -1.14
TPM1-225ENST00000560679 ETV6P41212 452 aa7.91□□□□□ -1.14
TPM1-225ENST00000560679 GSK3AP49840 483 aa7.91□□□□□ -1.14
TPM1-225ENST00000560679 DYNLT3P51808 116 aa7.91□□□□□ -1.14
TPM1-225ENST00000560679 SLC25A1P53007 311 aa7.91□□□□□ -1.14
TPM1-225ENST00000560679 DLX6P56179 175 aa7.91□□□□□ -1.14
TPM1-225ENST00000560679 LGALS4P56470 323 aa7.91□□□□□ -1.14
TPM1-225ENST00000560679 RPS7P62081 194 aaKnown RBP7.91□□□□□ -1.14
TPM1-225ENST00000560679 ACTC1P68032 377 aa7.91□□□□□ -1.14
TPM1-225ENST00000560679 ACTA1P68133 377 aa7.91□□□□□ -1.14
TPM1-225ENST00000560679 SSX2Q16385 188 aa7.91□□□□□ -1.14
TPM1-225ENST00000560679 ZNF626Q68DY1 528 aa7.91□□□□□ -1.14
TPM1-225ENST00000560679 CD200R1LQ6Q8B3 271 aa7.91□□□□□ -1.14
TPM1-225ENST00000560679 PRSS45Q7RTY3 260 aa7.91□□□□□ -1.14
TPM1-225ENST00000560679 CENPSQ8N2Z9 138 aa7.91□□□□□ -1.14
TPM1-225ENST00000560679 OR5P3Q8WZ94 311 aa7.91□□□□□ -1.14
TPM1-225ENST00000560679 SGK3Q96BR1 496 aa7.91□□□□□ -1.14
TPM1-225ENST00000560679 SLAMF6Q96DU3 332 aa7.91□□□□□ -1.14
TPM1-225ENST00000560679 SDSLQ96GA7 329 aa7.91□□□□□ -1.14
TPM1-225ENST00000560679 KCTD7Q96MP8 289 aa7.91□□□□□ -1.14
TPM1-225ENST00000560679 KCNJ15Q99712 375 aa7.91□□□□□ -1.14
TPM1-225ENST00000560679 ASCL2Q99929 193 aa7.91□□□□□ -1.14
TPM1-225ENST00000560679 MICU1Q9BPX6 476 aa7.91□□□□□ -1.14
TPM1-225ENST00000560679 ALG8Q9BVK2 526 aa7.91□□□□□ -1.14
TPM1-225ENST00000560679 SP140LQ9H930 580 aa7.91□□□□□ -1.14
TPM1-225ENST00000560679 ABCB10Q9NRK6 738 aa7.91□□□□□ -1.14
TPM1-225ENST00000560679 TBL2Q9Y4P3 447 aaKnown RBP7.91□□□□□ -1.14
TPM1-225ENST00000560679 FRAS1Q86XX4 4008 aa7.9□□□□□ -1.14
TPM1-225ENST00000560679 PNMA8CA0A1B0GUJ8 204 aa7.9□□□□□ -1.14
TPM1-225ENST00000560679 DAPL1A0PJW8 107 aa7.9□□□□□ -1.14
TPM1-225ENST00000560679 TMEM210A6NLX4 147 aa7.9□□□□□ -1.14
TPM1-225ENST00000560679 LOC110117498-PIK3R3F6TDL0 507 aa7.9□□□□□ -1.14
TPM1-225ENST00000560679 F2RL2O00254 374 aa7.9□□□□□ -1.14
TPM1-225ENST00000560679 GLCEO94923 617 aa7.9□□□□□ -1.14
TPM1-225ENST00000560679 CDRT1O95170 752 aa7.9□□□□□ -1.14
TPM1-225ENST00000560679 ARG1P05089 322 aa7.9□□□□□ -1.14
TPM1-225ENST00000560679 OCM2P0CE71 109 aa7.9□□□□□ -1.14
TPM1-225ENST00000560679 OCMP0CE72 109 aaPredicted RBP7.9□□□□□ -1.14
TPM1-225ENST00000560679 ZNF823P16415 610 aa7.9□□□□□ -1.14
TPM1-225ENST00000560679 FGF9P31371 208 aaPredicted RBP7.9□□□□□ -1.14
TPM1-225ENST00000560679 GNALP38405 381 aa7.9□□□□□ -1.14
TPM1-225ENST00000560679 RPS19P39019 145 aaKnown RBP7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms