RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 KCNK17Q96T54 332 aa7.49□□□□□ -1.21
CCDC33-209ENST00000560565 AMELYQ99218 206 aa7.49□□□□□ -1.21
CCDC33-209ENST00000560565 ANGPTL4Q9BY76 406 aa7.49□□□□□ -1.21
CCDC33-209ENST00000560565 OR8D2Q9GZM6 311 aa7.49□□□□□ -1.21
CCDC33-209ENST00000560565 NELFAQ9H3P2 528 aa7.49□□□□□ -1.21
CCDC33-209ENST00000560565 CHST11Q9NPF2 352 aa7.49□□□□□ -1.21
CCDC33-209ENST00000560565 CENPMQ9NSP4 180 aa7.49□□□□□ -1.21
CCDC33-209ENST00000560565 ZNF391Q9UJN7 358 aa7.49□□□□□ -1.21
CCDC33-209ENST00000560565 PITPNC1Q9UKF7 332 aa7.49□□□□□ -1.21
CCDC33-209ENST00000560565 HSF4Q9ULV5 492 aa7.49□□□□□ -1.21
CCDC33-209ENST00000560565 RHBDD3Q9Y3P4 386 aa7.49□□□□□ -1.21
CCDC33-209ENST00000560565 NOTCH2Q04721 2471 aa7.49□□□□□ -1.21
CCDC33-209ENST00000560565 FLNCQ14315 2725 aa7.48□□□□□ -1.21
CCDC33-209ENST00000560565 SMCO3A2RU48 225 aa7.48□□□□□ -1.21
CCDC33-209ENST00000560565 RBFOX3A6NFN3 312 aa7.48□□□□□ -1.21
CCDC33-209ENST00000560565 ANKUB1A6NFN9 424 aa7.48□□□□□ -1.21
CCDC33-209ENST00000560565 MSGN1A6NI15 193 aa7.48□□□□□ -1.21
CCDC33-209ENST00000560565 C21orf140B9A014 251 aa7.48□□□□□ -1.21
CCDC33-209ENST00000560565 H7C1Q1 480 aa7.48□□□□□ -1.21
CCDC33-209ENST00000560565 AGPAT2O15120 278 aa7.48□□□□□ -1.21
CCDC33-209ENST00000560565 SMAD9O15198 467 aaKnown RBP7.48□□□□□ -1.21
CCDC33-209ENST00000560565 SIGLEC5O15389 551 aa7.48□□□□□ -1.21
CCDC33-209ENST00000560565 PITX3O75364 302 aa7.48□□□□□ -1.21
CCDC33-209ENST00000560565 SCAF4O95104 1147 aaKnown RBP7.48□□□□□ -1.21
CCDC33-209ENST00000560565 F12P00748 615 aaPredicted RBP7.48□□□□□ -1.21
CCDC33-209ENST00000560565 TTRP02766 147 aa7.48□□□□□ -1.21
CCDC33-209ENST00000560565 OPN1MWP04001 364 aa7.48□□□□□ -1.21
CCDC33-209ENST00000560565 PGA3P0DJD8 388 aa7.48□□□□□ -1.21
CCDC33-209ENST00000560565 OPN1MW2P0DN77 364 aa7.48□□□□□ -1.21
CCDC33-209ENST00000560565 OPN1MW3P0DN78 364 aa7.48□□□□□ -1.21
CCDC33-209ENST00000560565 CTSSP25774 331 aa7.48□□□□□ -1.21
CCDC33-209ENST00000560565 CSNK1A1P48729 337 aa7.48□□□□□ -1.21
CCDC33-209ENST00000560565 TAS2R60P59551 318 aa7.48□□□□□ -1.21
CCDC33-209ENST00000560565 UBE2KP61086 200 aa7.48□□□□□ -1.21
CCDC33-209ENST00000560565 SUPT4H1P63272 117 aaKnown RBP7.48□□□□□ -1.21
CCDC33-209ENST00000560565 FOXK1P85037 733 aa7.48□□□□□ -1.21
CCDC33-209ENST00000560565 C17orf67Q0P5P2 114 aa7.48□□□□□ -1.21
CCDC33-209ENST00000560565 LY6DQ14210 128 aa7.48□□□□□ -1.21
CCDC33-209ENST00000560565 UBE2V2Q15819 145 aa7.48□□□□□ -1.21
CCDC33-209ENST00000560565 KCNMB1Q16558 191 aa7.48□□□□□ -1.21
CCDC33-209ENST00000560565 TAF9Q16594 264 aa7.48□□□□□ -1.21
CCDC33-209ENST00000560565 TBR1Q16650 682 aa7.48□□□□□ -1.21
CCDC33-209ENST00000560565 ZNF674Q2M3X9 581 aa7.48□□□□□ -1.21
CCDC33-209ENST00000560565 ANKRD55Q3KP44 614 aa7.48□□□□□ -1.21
CCDC33-209ENST00000560565 TMEM176BQ3YBM2 270 aaPredicted RBP7.48□□□□□ -1.21
CCDC33-209ENST00000560565 AKR1C8PQ5T2L2 129 aa7.48□□□□□ -1.21
CCDC33-209ENST00000560565 PLXDC2Q6UX71 529 aa7.48□□□□□ -1.21
CCDC33-209ENST00000560565 SHISA5Q8N114 240 aa7.48□□□□□ -1.21
CCDC33-209ENST00000560565 ZNF441Q8N8Z8 693 aa7.48□□□□□ -1.21
CCDC33-209ENST00000560565 OR13C9Q8NGT0 318 aa7.48□□□□□ -1.21
CCDC33-209ENST00000560565 OR2Y1Q8NGV0 311 aa7.48□□□□□ -1.21
CCDC33-209ENST00000560565 OR13G1Q8NGZ3 307 aa7.48□□□□□ -1.21
CCDC33-209ENST00000560565 CT55Q8WUE5 264 aa7.48□□□□□ -1.21
CCDC33-209ENST00000560565 GTF3AQ92664 365 aaKnown RBP7.48□□□□□ -1.21
CCDC33-209ENST00000560565 SPSB1Q96BD6 273 aa7.48□□□□□ -1.21
CCDC33-209ENST00000560565 MARS2Q96GW9 593 aaKnown RBP7.48□□□□□ -1.21
CCDC33-209ENST00000560565 OR10C1Q96KK4 312 aa7.48□□□□□ -1.21
CCDC33-209ENST00000560565 P2RX4Q99571 388 aa7.48□□□□□ -1.21
CCDC33-209ENST00000560565 SSX3Q99909 188 aa7.48□□□□□ -1.21
CCDC33-209ENST00000560565 NAA11Q9BSU3 229 aaPredicted RBP7.48□□□□□ -1.21
CCDC33-209ENST00000560565 GPR87Q9BY21 358 aa7.48□□□□□ -1.21
CCDC33-209ENST00000560565 NAA60Q9H7X0 242 aa7.48□□□□□ -1.21
CCDC33-209ENST00000560565 AKIRIN1Q9H9L7 192 aaPredicted RBP7.48□□□□□ -1.21
CCDC33-209ENST00000560565 MED13Q9UHV7 2174 aa7.48□□□□□ -1.21
CCDC33-209ENST00000560565 HDGFL3Q9Y3E1 203 aa7.48□□□□□ -1.21
CCDC33-209ENST00000560565 BSNQ9UPA5 3926 aa7.48□□□□□ -1.21
CCDC33-209ENST00000560565 TRAV1-1A0A0B4J248 108 aa7.47□□□□□ -1.21
CCDC33-209ENST00000560565 A0A0U1RQV5 110 aa7.47□□□□□ -1.21
CCDC33-209ENST00000560565 LRP5LA4QPB2 252 aa7.47□□□□□ -1.21
CCDC33-209ENST00000560565 OR5H15A6NDH6 313 aa7.47□□□□□ -1.21
CCDC33-209ENST00000560565 OR2W5A6NFC9 320 aa7.47□□□□□ -1.21
CCDC33-209ENST00000560565 OR5H1A6NKK0 313 aa7.47□□□□□ -1.21
CCDC33-209ENST00000560565 FTCDNL1E5RQL4 147 aa7.47□□□□□ -1.21
CCDC33-209ENST00000560565 RPL36A-HNRNPH2H7BZ11 118 aa7.47□□□□□ -1.21
CCDC33-209ENST00000560565 HRKO00198 91 aa7.47□□□□□ -1.21
CCDC33-209ENST00000560565 DVL1O14640 695 aa7.47□□□□□ -1.21
CCDC33-209ENST00000560565 TERTO14746 1132 aaKnown RBP7.47□□□□□ -1.21
CCDC33-209ENST00000560565 HMGB3O15347 200 aaKnown RBP7.47□□□□□ -1.21
CCDC33-209ENST00000560565 PPIHO43447 177 aaKnown RBP7.47□□□□□ -1.21
CCDC33-209ENST00000560565 OR5AC1P0C628 307 aa7.47□□□□□ -1.21
CCDC33-209ENST00000560565 ZNF728P0DKX0 622 aa7.47□□□□□ -1.21
CCDC33-209ENST00000560565 OR5H8P0DN80 308 aa7.47□□□□□ -1.21
CCDC33-209ENST00000560565 SFTPCP11686 197 aa7.47□□□□□ -1.21
CCDC33-209ENST00000560565 RPS2P15880 293 aaKnown RBP7.47□□□□□ -1.21
CCDC33-209ENST00000560565 CBR1P16152 277 aa7.47□□□□□ -1.21
CCDC33-209ENST00000560565 FOLR3P41439 243 aa7.47□□□□□ -1.21
CCDC33-209ENST00000560565 EFNA3P52797 238 aa7.47□□□□□ -1.21
CCDC33-209ENST00000560565 CLRN1P58418 232 aa7.47□□□□□ -1.21
CCDC33-209ENST00000560565 VAMP2P63027 116 aa7.47□□□□□ -1.21
CCDC33-209ENST00000560565 HSF1Q00613 529 aa7.47□□□□□ -1.21
CCDC33-209ENST00000560565 HGFACQ04756 655 aa7.47□□□□□ -1.21
CCDC33-209ENST00000560565 CNN3Q15417 329 aaKnown RBP7.47□□□□□ -1.21
CCDC33-209ENST00000560565 EXT1Q16394 746 aa7.47□□□□□ -1.21
CCDC33-209ENST00000560565 AADACL3Q5VUY0 350 aa7.47□□□□□ -1.21
CCDC33-209ENST00000560565 GGNBP1Q5YKI7 109 aa7.47□□□□□ -1.21
CCDC33-209ENST00000560565 FBXW12Q6X9E4 464 aa7.47□□□□□ -1.21
CCDC33-209ENST00000560565 RBMS3Q6XE24 437 aaKnown RBP7.47□□□□□ -1.21
CCDC33-209ENST00000560565 LIAT1Q6ZQX7 453 aa7.47□□□□□ -1.21
CCDC33-209ENST00000560565 ABHD12BQ7Z5M8 362 aaPredicted RBP7.47□□□□□ -1.21
CCDC33-209ENST00000560565 UEVLDQ8IX04 471 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms