RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 SELEP16581 610 aa8.34□□□□□ -1.07
RTF1-206ENST00000560447 RFC3P40938 356 aa8.34□□□□□ -1.07
RTF1-206ENST00000560447 EIF2S3P41091 472 aaKnown RBP8.34□□□□□ -1.07
RTF1-206ENST00000560447 LUMP51884 338 aaPredicted RBP8.34□□□□□ -1.07
RTF1-206ENST00000560447 HERV-K104P61576 105 aa8.34□□□□□ -1.07
RTF1-206ENST00000560447 IL24Q13007 206 aa8.34□□□□□ -1.07
RTF1-206ENST00000560447 RBM39Q14498 530 aaKnown RBP8.34□□□□□ -1.07
RTF1-206ENST00000560447 TMEM187Q14656 261 aa8.34□□□□□ -1.07
RTF1-206ENST00000560447 TBC1D28Q2M2D7 210 aa8.34□□□□□ -1.07
RTF1-206ENST00000560447 PIGYQ3MUY2 71 aa8.34□□□□□ -1.07
RTF1-206ENST00000560447 LRRC37A5PQ49AS3 106 aa8.34□□□□□ -1.07
RTF1-206ENST00000560447 SHEQ5VZ18 495 aa8.34□□□□□ -1.07
RTF1-206ENST00000560447 SLC22A25Q6T423 547 aa8.34□□□□□ -1.07
RTF1-206ENST00000560447 UNQ6126/PRO20091Q6UXV3 157 aa8.34□□□□□ -1.07
RTF1-206ENST00000560447 FBXW12Q6X9E4 464 aa8.34□□□□□ -1.07
RTF1-206ENST00000560447 MOB1BQ7L9L4 216 aa8.34□□□□□ -1.07
RTF1-206ENST00000560447 CALHM1Q8IU99 346 aa8.34□□□□□ -1.07
RTF1-206ENST00000560447 BAP18Q8IXM2 172 aa8.34□□□□□ -1.07
RTF1-206ENST00000560447 C1orf174Q8IYL3 243 aa8.34□□□□□ -1.07
RTF1-206ENST00000560447 HPSE2Q8WWQ2 592 aa8.34□□□□□ -1.07
RTF1-206ENST00000560447 OR5P3Q8WZ94 311 aa8.34□□□□□ -1.07
RTF1-206ENST00000560447 EXTL1Q92935 676 aa8.34□□□□□ -1.07
RTF1-206ENST00000560447 ABHD14BQ96IU4 210 aa8.34□□□□□ -1.07
RTF1-206ENST00000560447 PIGMQ9H3S5 423 aa8.34□□□□□ -1.07
RTF1-206ENST00000560447 ZNF442Q9H7R0 627 aa8.34□□□□□ -1.07
RTF1-206ENST00000560447 TREM2Q9NZC2 230 aa8.34□□□□□ -1.07
RTF1-206ENST00000560447 GPR160Q9UJ42 338 aa8.34□□□□□ -1.07
RTF1-206ENST00000560447 KCNMB2Q9Y691 235 aa8.34□□□□□ -1.07
RTF1-206ENST00000560447 PCNX2A6NKB5 2137 aa8.33□□□□□ -1.08
RTF1-206ENST00000560447 A0A096LPE4 126 aa8.33□□□□□ -1.08
RTF1-206ENST00000560447 A0A0C4DFX4 3053 aa8.33□□□□□ -1.08
RTF1-206ENST00000560447 A0A1W2PPZ6 126 aa8.33□□□□□ -1.08
RTF1-206ENST00000560447 LRP5LA4QPB2 252 aa8.33□□□□□ -1.08
RTF1-206ENST00000560447 ZNF732B4DXR9 585 aa8.33□□□□□ -1.08
RTF1-206ENST00000560447 J3QT63 122 aa8.33□□□□□ -1.08
RTF1-206ENST00000560447 MSTNO14793 375 aa8.33□□□□□ -1.08
RTF1-206ENST00000560447 ADAP1O75689 374 aa8.33□□□□□ -1.08
RTF1-206ENST00000560447 OR7C1O76099 320 aaPredicted RBP8.33□□□□□ -1.08
RTF1-206ENST00000560447 IL18BPO95998 194 aa8.33□□□□□ -1.08
RTF1-206ENST00000560447 IGHV3-9P01782 118 aa8.33□□□□□ -1.08
RTF1-206ENST00000560447 FTH1P19P0C7X4 201 aa8.33□□□□□ -1.08
RTF1-206ENST00000560447 MDH2P40926 338 aaKnown RBP8.33□□□□□ -1.08
RTF1-206ENST00000560447 PIGPP57054 158 aa8.33□□□□□ -1.08
RTF1-206ENST00000560447 SPEM2Q0P670 501 aa8.33□□□□□ -1.08
RTF1-206ENST00000560447 TGIF1Q15583 401 aa8.33□□□□□ -1.08
RTF1-206ENST00000560447 GABRA6Q16445 453 aa8.33□□□□□ -1.08
RTF1-206ENST00000560447 IAH1Q2TAA2 248 aaPredicted RBP8.33□□□□□ -1.08
RTF1-206ENST00000560447 C1QTNF12Q5T7M4 302 aa8.33□□□□□ -1.08
RTF1-206ENST00000560447 INO80CQ6PI98 192 aaPredicted RBP8.33□□□□□ -1.08
RTF1-206ENST00000560447 P4HA3Q7Z4N8 544 aa8.33□□□□□ -1.08
RTF1-206ENST00000560447 LGI3Q8N145 548 aa8.33□□□□□ -1.08
RTF1-206ENST00000560447 SUN5Q8TC36 379 aa8.33□□□□□ -1.08
RTF1-206ENST00000560447 RNF141Q8WVD5 230 aa8.33□□□□□ -1.08
RTF1-206ENST00000560447 RTN4IP1Q8WWV3 396 aaPredicted RBP8.33□□□□□ -1.08
RTF1-206ENST00000560447 MAFIPQ8WZ33 124 aa8.33□□□□□ -1.08
RTF1-206ENST00000560447 SAT2Q96F10 170 aaPredicted RBP8.33□□□□□ -1.08
RTF1-206ENST00000560447 CXorf58Q96LI9 332 aa8.33□□□□□ -1.08
RTF1-206ENST00000560447 ZNF75AQ96N20 296 aa8.33□□□□□ -1.08
RTF1-206ENST00000560447 HDHD3Q9BSH5 251 aaPredicted RBP8.33□□□□□ -1.08
RTF1-206ENST00000560447 Q9N2K0 584 aa8.33□□□□□ -1.08
RTF1-206ENST00000560447 ASCL3Q9NQ33 180 aa8.33□□□□□ -1.08
RTF1-206ENST00000560447 TMEM100Q9NV29 134 aa8.33□□□□□ -1.08
RTF1-206ENST00000560447 SPRR3Q9UBC9 169 aa8.33□□□□□ -1.08
RTF1-206ENST00000560447 CLCF1Q9UBD9 225 aa8.33□□□□□ -1.08
RTF1-206ENST00000560447 MED13Q9UHV7 2174 aa8.33□□□□□ -1.08
RTF1-206ENST00000560447 TMED3Q9Y3Q3 217 aa8.33□□□□□ -1.08
RTF1-206ENST00000560447 LIPGQ9Y5X9 500 aa8.33□□□□□ -1.08
RTF1-206ENST00000560447 USP34Q70CQ2 3546 aa8.33□□□□□ -1.08
RTF1-206ENST00000560447 TMEM210A6NLX4 147 aa8.32□□□□□ -1.08
RTF1-206ENST00000560447 E5RGE8 158 aa8.32□□□□□ -1.08
RTF1-206ENST00000560447 H0YIZ8 118 aa8.32□□□□□ -1.08
RTF1-206ENST00000560447 DEDDO75618 318 aa8.32□□□□□ -1.08
RTF1-206ENST00000560447 TUSC2O75896 110 aa8.32□□□□□ -1.08
RTF1-206ENST00000560447 CDS2O95674 445 aa8.32□□□□□ -1.08
RTF1-206ENST00000560447 PLATP00750 562 aa8.32□□□□□ -1.08
RTF1-206ENST00000560447 KNG1P01042 644 aa8.32□□□□□ -1.08
RTF1-206ENST00000560447 TK1P04183 234 aa8.32□□□□□ -1.08
RTF1-206ENST00000560447 PI3P19957 117 aa8.32□□□□□ -1.08
RTF1-206ENST00000560447 FCGR2CP31995 323 aa8.32□□□□□ -1.08
RTF1-206ENST00000560447 OPRM1P35372 400 aa8.32□□□□□ -1.08
RTF1-206ENST00000560447 HAAOP46952 286 aa8.32□□□□□ -1.08
RTF1-206ENST00000560447 RAB32Q13637 225 aa8.32□□□□□ -1.08
RTF1-206ENST00000560447 GUSBP1Q15486 140 aa8.32□□□□□ -1.08
RTF1-206ENST00000560447 GPR157Q5UAW9 335 aa8.32□□□□□ -1.08
RTF1-206ENST00000560447 OR2A2Q6IF42 318 aa8.32□□□□□ -1.08
RTF1-206ENST00000560447 ZNF880Q6PDB4 577 aa8.32□□□□□ -1.08
RTF1-206ENST00000560447 FAM71E2Q8N5Q1 922 aa8.32□□□□□ -1.08
RTF1-206ENST00000560447 C17orf50Q8WW18 174 aa8.32□□□□□ -1.08
RTF1-206ENST00000560447 IL22RA2Q969J5 263 aa8.32□□□□□ -1.08
RTF1-206ENST00000560447 SARAFQ96BY9 339 aa8.32□□□□□ -1.08
RTF1-206ENST00000560447 OR10C1Q96KK4 312 aa8.32□□□□□ -1.08
RTF1-206ENST00000560447 SPIN2AQ99865 258 aa8.32□□□□□ -1.08
RTF1-206ENST00000560447 MICU1Q9BPX6 476 aa8.32□□□□□ -1.08
RTF1-206ENST00000560447 SPIN2BQ9BPZ2 258 aa8.32□□□□□ -1.08
RTF1-206ENST00000560447 RTL8AQ9BWD3 113 aa8.32□□□□□ -1.08
RTF1-206ENST00000560447 DEFB127Q9H1M4 99 aa8.32□□□□□ -1.08
RTF1-206ENST00000560447 WDR13Q9H1Z4 485 aa8.32□□□□□ -1.08
RTF1-206ENST00000560447 BARX1Q9HBU1 254 aaPredicted RBP8.32□□□□□ -1.08
RTF1-206ENST00000560447 OBP2BQ9NPH6 170 aa8.32□□□□□ -1.08
RTF1-206ENST00000560447 SLC2A9Q9NRM0 540 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms