RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 SNX22Q96L94 193 aa13.87□□□□□ -0.19
RPL28-209ENST00000560055 C1orf147Q96MC9 270 aaPredicted RBP13.87□□□□□ -0.19
RPL28-209ENST00000560055 WDFY2Q96P53 400 aa13.87□□□□□ -0.19
RPL28-209ENST00000560055 TBX15Q96SF7 602 aa13.87□□□□□ -0.19
RPL28-209ENST00000560055 UQCC2Q9BRT2 126 aa13.87□□□□□ -0.19
RPL28-209ENST00000560055 SIRPDQ9H106 197 aa13.87□□□□□ -0.19
RPL28-209ENST00000560055 EXOSC4Q9NPD3 245 aaKnown RBP13.87□□□□□ -0.19
RPL28-209ENST00000560055 KPTNQ9Y664 436 aa13.87□□□□□ -0.19
RPL28-209ENST00000560055 SH2D1BO14796 132 aa13.86□□□□□ -0.19
RPL28-209ENST00000560055 OR2H2O95918 312 aa13.86□□□□□ -0.19
RPL28-209ENST00000560055 GALP22466 123 aa13.86□□□□□ -0.19
RPL28-209ENST00000560055 NHLRC3Q5JS37 347 aa13.86□□□□□ -0.19
RPL28-209ENST00000560055 KIR3DL3Q8N743 410 aa13.86□□□□□ -0.19
RPL28-209ENST00000560055 OR4D6Q8NGJ1 314 aa13.86□□□□□ -0.19
RPL28-209ENST00000560055 MUL1Q969V5 352 aa13.86□□□□□ -0.19
RPL28-209ENST00000560055 METTL9Q9H1A3 318 aa13.86□□□□□ -0.19
RPL28-209ENST00000560055 ZNF696Q9H7X3 374 aa13.86□□□□□ -0.19
RPL28-209ENST00000560055 C19orf12Q9NSK7 152 aa13.86□□□□□ -0.19
RPL28-209ENST00000560055 GLS2Q9UI32 602 aa13.86□□□□□ -0.19
RPL28-209ENST00000560055 ING4Q9UNL4 249 aa13.86□□□□□ -0.19
RPL28-209ENST00000560055 TRDV1A0A1B0GX56 115 aa13.85□□□□□ -0.19
RPL28-209ENST00000560055 ZNF780AO75290 641 aaPredicted RBP13.85□□□□□ -0.19
RPL28-209ENST00000560055 ARL6IP5O75915 188 aa13.85□□□□□ -0.19
RPL28-209ENST00000560055 OR3A1P47881 315 aa13.85□□□□□ -0.19
RPL28-209ENST00000560055 ARF6P62330 175 aa13.85□□□□□ -0.19
RPL28-209ENST00000560055 RPL31P62899 125 aaKnown RBP13.85□□□□□ -0.19
RPL28-209ENST00000560055 IL13RA2Q14627 380 aa13.85□□□□□ -0.19
RPL28-209ENST00000560055 TUSC1Q2TAM9 212 aa13.85□□□□□ -0.19
RPL28-209ENST00000560055 CHST4Q8NCG5 386 aa13.85□□□□□ -0.19
RPL28-209ENST00000560055 OR5D13Q8NGL4 314 aa13.85□□□□□ -0.19
RPL28-209ENST00000560055 TBC1D15Q8TC07 691 aa13.85□□□□□ -0.19
RPL28-209ENST00000560055 GFI1Q99684 422 aa13.85□□□□□ -0.19
RPL28-209ENST00000560055 MRPS28Q9Y2Q9 187 aaKnown RBP13.85□□□□□ -0.19
RPL28-209ENST00000560055 A0A0G2JK05 382 aa13.84□□□□□ -0.19
RPL28-209ENST00000560055 M0R1W7 72 aa13.84□□□□□ -0.19
RPL28-209ENST00000560055 SIRPB1O00241 398 aa13.84□□□□□ -0.19
RPL28-209ENST00000560055 TOX4O94842 621 aa13.84□□□□□ -0.19
RPL28-209ENST00000560055 HTR3BO95264 441 aa13.84□□□□□ -0.19
RPL28-209ENST00000560055 IGHV4-38-2P0DP08 117 aa13.84□□□□□ -0.19
RPL28-209ENST00000560055 EPHA1P21709 976 aa13.84□□□□□ -0.19
RPL28-209ENST00000560055 RBM11P57052 281 aaKnown RBP13.84□□□□□ -0.19
RPL28-209ENST00000560055 PIGYQ3MUY2 71 aa13.84□□□□□ -0.19
RPL28-209ENST00000560055 SLC22A6Q4U2R8 563 aa13.84□□□□□ -0.19
RPL28-209ENST00000560055 C1orf100Q5SVJ3 147 aa13.84□□□□□ -0.19
RPL28-209ENST00000560055 METTL11BQ5VVY1 283 aa13.84□□□□□ -0.19
RPL28-209ENST00000560055 GLIPR1L1Q6UWM5 242 aa13.84□□□□□ -0.19
RPL28-209ENST00000560055 C1orf122Q6ZSJ8 110 aa13.84□□□□□ -0.19
RPL28-209ENST00000560055 Q8N7P7 452 aa13.84□□□□□ -0.19
RPL28-209ENST00000560055 OR4S1Q8NGB4 309 aa13.84□□□□□ -0.19
RPL28-209ENST00000560055 FOXRED1Q96CU9 486 aaPredicted RBP13.84□□□□□ -0.19
RPL28-209ENST00000560055 S100A13Q99584 98 aa13.84□□□□□ -0.19
RPL28-209ENST00000560055 CHST6Q9GZX3 395 aa13.84□□□□□ -0.19
RPL28-209ENST00000560055 SLITRK2Q9H156 845 aa13.84□□□□□ -0.19
RPL28-209ENST00000560055 ONECUT1Q9UBC0 465 aa13.84□□□□□ -0.19
RPL28-209ENST00000560055 NUP50Q9UKX7 468 aa13.84□□□□□ -0.19
RPL28-209ENST00000560055 STAB1Q9NY15 2570 aa13.83□□□□□ -0.19
RPL28-209ENST00000560055 A0A087WXM4 84 aa13.83□□□□□ -0.2
RPL28-209ENST00000560055 A0A1W2PP11 408 aa13.83□□□□□ -0.2
RPL28-209ENST00000560055 A0A1W2PQ09 198 aa13.83□□□□□ -0.2
RPL28-209ENST00000560055 TRIM64CA6NLI5 447 aa13.83□□□□□ -0.2
RPL28-209ENST00000560055 SLC33A1O00400 549 aaPredicted RBP13.83□□□□□ -0.2
RPL28-209ENST00000560055 CSTBP04080 98 aaKnown RBP13.83□□□□□ -0.2
RPL28-209ENST00000560055 CSN2P05814 226 aa13.83□□□□□ -0.2
RPL28-209ENST00000560055 SERPINA2P20848 420 aa13.83□□□□□ -0.2
RPL28-209ENST00000560055 GABRR1P24046 479 aa13.83□□□□□ -0.2
RPL28-209ENST00000560055 CALRP27797 417 aaKnown RBP13.83□□□□□ -0.2
RPL28-209ENST00000560055 GPR176Q14439 515 aa13.83□□□□□ -0.2
RPL28-209ENST00000560055 GRK1Q15835 563 aa13.83□□□□□ -0.2
RPL28-209ENST00000560055 NEDD8Q15843 81 aa13.83□□□□□ -0.2
RPL28-209ENST00000560055 GLT8D1Q68CQ7 371 aa13.83□□□□□ -0.2
RPL28-209ENST00000560055 TMEM200BQ69YZ2 307 aa13.83□□□□□ -0.2
RPL28-209ENST00000560055 AWAT2Q6E213 333 aa13.83□□□□□ -0.2
RPL28-209ENST00000560055 TCF23Q7RTU1 214 aa13.83□□□□□ -0.2
RPL28-209ENST00000560055 OSR2Q8N2R0 312 aa13.83□□□□□ -0.2
RPL28-209ENST00000560055 TSPAN14Q8NG11 270 aa13.83□□□□□ -0.2
RPL28-209ENST00000560055 OR4M1Q8NGD0 313 aa13.83□□□□□ -0.2
RPL28-209ENST00000560055 NR1H4Q96RI1 486 aaPredicted RBP13.83□□□□□ -0.2
RPL28-209ENST00000560055 PCGF1Q9BSM1 259 aa13.83□□□□□ -0.2
RPL28-209ENST00000560055 IFT22Q9H7X7 185 aa13.83□□□□□ -0.2
RPL28-209ENST00000560055 UNKLQ9H9P5 680 aaKnown RBP13.83□□□□□ -0.2
RPL28-209ENST00000560055 PCDHB16Q9NRJ7 776 aa13.83□□□□□ -0.2
RPL28-209ENST00000560055 GHRLQ9UBU3 117 aa13.83□□□□□ -0.2
RPL28-209ENST00000560055 ST3GAL6Q9Y274 331 aa13.83□□□□□ -0.2
RPL28-209ENST00000560055 TRAV1-2A0A0B4J238 106 aa13.82□□□□□ -0.2
RPL28-209ENST00000560055 TRAV24A0A0B4J272 114 aa13.82□□□□□ -0.2
RPL28-209ENST00000560055 TRAV40A0A0B4J280 105 aa13.82□□□□□ -0.2
RPL28-209ENST00000560055 SHISA3A0PJX4 238 aa13.82□□□□□ -0.2
RPL28-209ENST00000560055 MGST3O14880 152 aa13.82□□□□□ -0.2
RPL28-209ENST00000560055 DEGS1O15121 323 aa13.82□□□□□ -0.2
RPL28-209ENST00000560055 SLC22A1O15245 554 aa13.82□□□□□ -0.2
RPL28-209ENST00000560055 IFNA2P01563 188 aa13.82□□□□□ -0.2
RPL28-209ENST00000560055 GTF2F2P13984 249 aa13.82□□□□□ -0.2
RPL28-209ENST00000560055 ZNF44P15621 663 aa13.82□□□□□ -0.2
RPL28-209ENST00000560055 ERP29P30040 261 aaKnown RBP13.82□□□□□ -0.2
RPL28-209ENST00000560055 SCGB2A2Q13296 93 aa13.82□□□□□ -0.2
RPL28-209ENST00000560055 ZNF273Q14593 569 aa13.82□□□□□ -0.2
RPL28-209ENST00000560055 PDCD1Q15116 288 aa13.82□□□□□ -0.2
RPL28-209ENST00000560055 C9orf139Q6ZV77 190 aa13.82□□□□□ -0.2
RPL28-209ENST00000560055 GDPD3Q7L5L3 318 aa13.82□□□□□ -0.2
RPL28-209ENST00000560055 LINC00596Q86U02 117 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms