RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 C16orf82Q7Z2V1 217 aa12.37□□□□□ -0.43
CSPG4P12-202ENST00000559989 HOXC4P09017 264 aaPredicted RBP12.36□□□□□ -0.43
CSPG4P12-202ENST00000559989 ROM1Q03395 351 aa12.36□□□□□ -0.43
CSPG4P12-202ENST00000559989 KCNAB1Q14722 419 aa12.36□□□□□ -0.43
CSPG4P12-202ENST00000559989 GUCD1Q96NT3 240 aa12.36□□□□□ -0.43
CSPG4P12-202ENST00000559989 NRSN2Q9GZP1 204 aa12.36□□□□□ -0.43
CSPG4P12-202ENST00000559989 LTB4R2Q9NPC1 389 aa12.36□□□□□ -0.43
CSPG4P12-202ENST00000559989 SIRT5Q9NXA8 310 aa12.36□□□□□ -0.43
CSPG4P12-202ENST00000559989 PLEKHB1Q9UF11 243 aaPredicted RBP12.36□□□□□ -0.43
CSPG4P12-202ENST00000559989 MMP17Q9ULZ9 603 aa12.36□□□□□ -0.43
CSPG4P12-202ENST00000559989 OR4C45A6NMZ5 311 aa12.36□□□□□ -0.43
CSPG4P12-202ENST00000559989 PRSS2P07478 247 aa12.36□□□□□ -0.43
CSPG4P12-202ENST00000559989 FAM157CP0CG43 387 aa12.36□□□□□ -0.43
CSPG4P12-202ENST00000559989 ZNF252P-AS1Q0IIN9 211 aa12.36□□□□□ -0.43
CSPG4P12-202ENST00000559989 PLPPR5Q32ZL2 321 aa12.36□□□□□ -0.43
CSPG4P12-202ENST00000559989 CXorf67Q86X51 503 aaPredicted RBP12.36□□□□□ -0.43
CSPG4P12-202ENST00000559989 MKRN2OSH3BPM6 223 aa12.36□□□□□ -0.43
CSPG4P12-202ENST00000559989 KBTBD11O94819 623 aa12.36□□□□□ -0.43
CSPG4P12-202ENST00000559989 HOXD9P28356 352 aaPredicted RBP12.36□□□□□ -0.43
CSPG4P12-202ENST00000559989 ZNF506Q5JVG8 444 aa12.36□□□□□ -0.43
CSPG4P12-202ENST00000559989 LRRC75AQ8NAA5 344 aa12.36□□□□□ -0.43
CSPG4P12-202ENST00000559989 IGHV3-20A0A0C4DH32 117 aa12.36□□□□□ -0.43
CSPG4P12-202ENST00000559989 GHRHP01286 108 aa12.36□□□□□ -0.43
CSPG4P12-202ENST00000559989 FRG2CA6NGY1 282 aa12.36□□□□□ -0.43
CSPG4P12-202ENST00000559989 HIST1H1DP16402 221 aaKnown RBP12.36□□□□□ -0.43
CSPG4P12-202ENST00000559989 PRSS36Q5K4E3 855 aa12.36□□□□□ -0.43
CSPG4P12-202ENST00000559989 OR10J6PQ8NGY7 276 aa12.36□□□□□ -0.43
CSPG4P12-202ENST00000559989 OR13C6PQ8NH95 151 aa12.36□□□□□ -0.43
CSPG4P12-202ENST00000559989 ALKBH7Q9BT30 221 aaPredicted RBP12.36□□□□□ -0.43
CSPG4P12-202ENST00000559989 LRP12Q9Y561 859 aa12.36□□□□□ -0.43
CSPG4P12-202ENST00000559989 COL3A1P02461 1466 aaPredicted RBP12.36□□□□□ -0.43
CSPG4P12-202ENST00000559989 ZNF735P0CB33 412 aa12.35□□□□□ -0.43
CSPG4P12-202ENST00000559989 SPNP16150 400 aa12.35□□□□□ -0.43
CSPG4P12-202ENST00000559989 ST3GAL2Q16842 350 aa12.35□□□□□ -0.43
CSPG4P12-202ENST00000559989 EBLN2Q6P2I7 272 aa12.35□□□□□ -0.43
CSPG4P12-202ENST00000559989 C15orf39Q6ZRI6 1047 aa12.35□□□□□ -0.43
CSPG4P12-202ENST00000559989 SCD5Q86SK9 330 aa12.35□□□□□ -0.43
CSPG4P12-202ENST00000559989 OR2V1Q8NHB1 315 aa12.35□□□□□ -0.43
CSPG4P12-202ENST00000559989 NWD2Q9ULI1 1742 aa12.35□□□□□ -0.43
CSPG4P12-202ENST00000559989 ZNF137PP52743 207 aa12.35□□□□□ -0.43
CSPG4P12-202ENST00000559989 MEF2CQ06413 473 aaPredicted RBP12.35□□□□□ -0.43
CSPG4P12-202ENST00000559989 LGALSLQ3ZCW2 172 aaPredicted RBP12.35□□□□□ -0.43
CSPG4P12-202ENST00000559989 TMEM255AQ5JRV8 349 aa12.35□□□□□ -0.43
CSPG4P12-202ENST00000559989 STPG2Q8N412 459 aa12.35□□□□□ -0.43
CSPG4P12-202ENST00000559989 PCP4P48539 62 aa12.35□□□□□ -0.43
CSPG4P12-202ENST00000559989 CLDN10P78369 228 aa12.35□□□□□ -0.43
CSPG4P12-202ENST00000559989 FOXO1Q12778 655 aa12.35□□□□□ -0.43
CSPG4P12-202ENST00000559989 DHRS2Q13268 280 aa12.35□□□□□ -0.43
CSPG4P12-202ENST00000559989 CLLU1OSQ5K130 101 aa12.35□□□□□ -0.43
CSPG4P12-202ENST00000559989 OR4D9Q8NGE8 314 aa12.35□□□□□ -0.43
CSPG4P12-202ENST00000559989 OR4B1Q8NGF8 309 aa12.35□□□□□ -0.43
CSPG4P12-202ENST00000559989 OR8B3Q8NGG8 313 aa12.35□□□□□ -0.43
CSPG4P12-202ENST00000559989 PHOSPHO2Q8TCD6 241 aa12.35□□□□□ -0.43
CSPG4P12-202ENST00000559989 ARHGAP5-AS1Q96IT6 56 aa12.35□□□□□ -0.43
CSPG4P12-202ENST00000559989 DOK1Q99704 481 aa12.35□□□□□ -0.43
CSPG4P12-202ENST00000559989 MAP1LC3AQ9H492 121 aa12.35□□□□□ -0.43
CSPG4P12-202ENST00000559989 MFAP4P55083 255 aa12.35□□□□□ -0.43
CSPG4P12-202ENST00000559989 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.35□□□□□ -0.43
CSPG4P12-202ENST00000559989 CKS2P33552 79 aa12.35□□□□□ -0.43
CSPG4P12-202ENST00000559989 DEFB109BQ30KR1 87 aa12.35□□□□□ -0.43
CSPG4P12-202ENST00000559989 ZNF880Q6PDB4 577 aa12.35□□□□□ -0.43
CSPG4P12-202ENST00000559989 MRGPRGQ86SM5 289 aa12.35□□□□□ -0.43
CSPG4P12-202ENST00000559989 RAB33BQ9H082 229 aa12.35□□□□□ -0.43
CSPG4P12-202ENST00000559989 SLC26A1Q9H2B4 701 aa12.35□□□□□ -0.43
CSPG4P12-202ENST00000559989 UBE2V2Q15819 145 aa12.35□□□□□ -0.43
CSPG4P12-202ENST00000559989 OR4X1Q8NH49 305 aa12.35□□□□□ -0.43
CSPG4P12-202ENST00000559989 MRC1P22897 1456 aa12.35□□□□□ -0.43
CSPG4P12-202ENST00000559989 C1QTNF9BB2RNN3 333 aa12.35□□□□□ -0.43
CSPG4P12-202ENST00000559989 COX7A1P24310 79 aa12.35□□□□□ -0.43
CSPG4P12-202ENST00000559989 SUMO3P55854 103 aaPredicted RBP12.35□□□□□ -0.43
CSPG4P12-202ENST00000559989 SPRED3Q2MJR0 410 aa12.35□□□□□ -0.43
CSPG4P12-202ENST00000559989 SLC25A35Q3KQZ1 300 aa12.35□□□□□ -0.43
CSPG4P12-202ENST00000559989 CA13Q8N1Q1 262 aa12.35□□□□□ -0.43
CSPG4P12-202ENST00000559989 ZNF665Q9H7R5 613 aa12.35□□□□□ -0.43
CSPG4P12-202ENST00000559989 GEMIN7Q9H840 131 aaKnown RBP12.35□□□□□ -0.43
CSPG4P12-202ENST00000559989 RAG2P55895 527 aa12.34□□□□□ -0.43
CSPG4P12-202ENST00000559989 TNFAIP6P98066 277 aaPredicted RBP12.34□□□□□ -0.43
CSPG4P12-202ENST00000559989 SLC25A42Q86VD7 318 aa12.34□□□□□ -0.43
CSPG4P12-202ENST00000559989 LSM10Q969L4 123 aaKnown RBP12.34□□□□□ -0.43
CSPG4P12-202ENST00000559989 OR2V2Q96R30 315 aa12.34□□□□□ -0.43
CSPG4P12-202ENST00000559989 CXXC4Q9H2H0 198 aa12.34□□□□□ -0.43
CSPG4P12-202ENST00000559989 TMEM189A5PLL7 270 aa12.34□□□□□ -0.43
CSPG4P12-202ENST00000559989 TMEM189-UBE2V1I3L0A0 370 aa12.34□□□□□ -0.43
CSPG4P12-202ENST00000559989 PPICP45877 212 aa12.34□□□□□ -0.43
CSPG4P12-202ENST00000559989 HYAL1Q12794 435 aa12.34□□□□□ -0.43
CSPG4P12-202ENST00000559989 PPP1R1AQ13522 171 aa12.34□□□□□ -0.43
CSPG4P12-202ENST00000559989 KISS1Q15726 138 aa12.34□□□□□ -0.43
CSPG4P12-202ENST00000559989 RABAC1Q9UI14 185 aa12.34□□□□□ -0.43
CSPG4P12-202ENST00000559989 GJB3O75712 270 aa12.34□□□□□ -0.43
CSPG4P12-202ENST00000559989 RNFT1Q5M7Z0 435 aa12.34□□□□□ -0.43
CSPG4P12-202ENST00000559989 FOXC2Q99958 501 aa12.34□□□□□ -0.43
CSPG4P12-202ENST00000559989 COL1A1P02452 1464 aaPredicted RBP12.34□□□□□ -0.43
CSPG4P12-202ENST00000559989 MPV17LQ2QL34 196 aa12.34□□□□□ -0.43
CSPG4P12-202ENST00000559989 NSUN5P2Q63ZY6 315 aa12.34□□□□□ -0.43
CSPG4P12-202ENST00000559989 RNF133Q8WVZ7 376 aa12.34□□□□□ -0.43
CSPG4P12-202ENST00000559989 OR8B2Q96RD0 313 aa12.34□□□□□ -0.43
CSPG4P12-202ENST00000559989 AKIP1Q9NQ31 210 aa12.34□□□□□ -0.43
CSPG4P12-202ENST00000559989 IGKV3-7A0A075B6H7 116 aa12.34□□□□□ -0.43
CSPG4P12-202ENST00000559989 CDAP32320 146 aa12.34□□□□□ -0.43
CSPG4P12-202ENST00000559989 KCNMB1Q16558 191 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms