RNA–Protein interactions for RNA: ENST00000559931.5

SMAD6-204, Transcript of SMAD family member 6, humanhuman

TSL 3

Gene SMAD6, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-204ENST00000559931 BARHL1Q9BZE3 327 aa11.96□□□□□ -0.49
SMAD6-204ENST00000559931 ATG5Q9H1Y0 275 aa11.96□□□□□ -0.49
SMAD6-204ENST00000559931 COMMD3Q9UBI1 195 aa11.96□□□□□ -0.49
SMAD6-204ENST00000559931 METRNQ9UJH8 293 aa11.96□□□□□ -0.49
SMAD6-204ENST00000559931 FLNAP21333 2647 aaKnown RBP11.96□□□□□ -0.5
SMAD6-204ENST00000559931 F8P00451 2351 aa11.96□□□□□ -0.5
SMAD6-204ENST00000559931 METTL21EPA6NDL7 271 aa11.95□□□□□ -0.5
SMAD6-204ENST00000559931 H3BUI4 141 aa11.95□□□□□ -0.5
SMAD6-204ENST00000559931 H7C1Q1 480 aa11.95□□□□□ -0.5
SMAD6-204ENST00000559931 DVL1O14640 695 aa11.95□□□□□ -0.5
SMAD6-204ENST00000559931 IGHV2-5P01817 119 aa11.95□□□□□ -0.5
SMAD6-204ENST00000559931 NDUFB7P17568 137 aa11.95□□□□□ -0.5
SMAD6-204ENST00000559931 AMY2BP19961 511 aa11.95□□□□□ -0.5
SMAD6-204ENST00000559931 CPT2P23786 658 aa11.95□□□□□ -0.5
SMAD6-204ENST00000559931 LMO4P61968 165 aa11.95□□□□□ -0.5
SMAD6-204ENST00000559931 GNB2P62879 340 aa11.95□□□□□ -0.5
SMAD6-204ENST00000559931 LOXL1Q08397 574 aaPredicted RBP11.95□□□□□ -0.5
SMAD6-204ENST00000559931 MPV17LQ2QL34 196 aa11.95□□□□□ -0.5
SMAD6-204ENST00000559931 ESCO2Q56NI9 601 aa11.95□□□□□ -0.5
SMAD6-204ENST00000559931 NHLRC3Q5JS37 347 aa11.95□□□□□ -0.5
SMAD6-204ENST00000559931 Q6P435 159 aa11.95□□□□□ -0.5
SMAD6-204ENST00000559931 LINC00596Q86U02 117 aa11.95□□□□□ -0.5
SMAD6-204ENST00000559931 OR5H6Q8NGV6 325 aa11.95□□□□□ -0.5
SMAD6-204ENST00000559931 PPP1R35Q8TAP8 253 aa11.95□□□□□ -0.5
SMAD6-204ENST00000559931 DYNC2LI1Q8TCX1 351 aa11.95□□□□□ -0.5
SMAD6-204ENST00000559931 NEK7Q8TDX7 302 aa11.95□□□□□ -0.5
SMAD6-204ENST00000559931 ACOT12Q8WYK0 555 aa11.95□□□□□ -0.5
SMAD6-204ENST00000559931 ST8SIA4Q92187 359 aa11.95□□□□□ -0.5
SMAD6-204ENST00000559931 PHF21AQ96BD5 680 aa11.95□□□□□ -0.5
SMAD6-204ENST00000559931 KCTD12Q96CX2 325 aaKnown RBP11.95□□□□□ -0.5
SMAD6-204ENST00000559931 SDSLQ96GA7 329 aa11.95□□□□□ -0.5
SMAD6-204ENST00000559931 Q96M66 194 aa11.95□□□□□ -0.5
SMAD6-204ENST00000559931 NEDD4LQ96PU5 975 aa11.95□□□□□ -0.5
SMAD6-204ENST00000559931 DCUN1D5Q9BTE7 237 aa11.95□□□□□ -0.5
SMAD6-204ENST00000559931 KAAG1Q9UBP8 84 aa11.95□□□□□ -0.5
SMAD6-204ENST00000559931 SLC25A10Q9UBX3 287 aaPredicted RBP11.95□□□□□ -0.5
SMAD6-204ENST00000559931 CLN8Q9UBY8 286 aa11.95□□□□□ -0.5
SMAD6-204ENST00000559931 ZNF222Q9UK12 451 aa11.95□□□□□ -0.5
SMAD6-204ENST00000559931 MAB21L2Q9Y586 359 aa11.95□□□□□ -0.5
SMAD6-204ENST00000559931 ETV7Q9Y603 341 aa11.95□□□□□ -0.5
SMAD6-204ENST00000559931 HIVEP1P15822 2718 aa11.95□□□□□ -0.5
SMAD6-204ENST00000559931 A0A1B0GW55 424 aa11.94□□□□□ -0.5
SMAD6-204ENST00000559931 HSPB6O14558 160 aa11.94□□□□□ -0.5
SMAD6-204ENST00000559931 LDLRAD4O15165 306 aa11.94□□□□□ -0.5
SMAD6-204ENST00000559931 SIGLEC5O15389 551 aa11.94□□□□□ -0.5
SMAD6-204ENST00000559931 DUX4L2P0CJ85 424 aa11.94□□□□□ -0.5
SMAD6-204ENST00000559931 DUX4L3P0CJ86 424 aa11.94□□□□□ -0.5
SMAD6-204ENST00000559931 DUX4L4P0CJ87 422 aa11.94□□□□□ -0.5
SMAD6-204ENST00000559931 DUX4L5P0CJ88 424 aa11.94□□□□□ -0.5
SMAD6-204ENST00000559931 DUX4L6P0CJ89 424 aa11.94□□□□□ -0.5
SMAD6-204ENST00000559931 DUX4L7P0CJ90 424 aa11.94□□□□□ -0.5
SMAD6-204ENST00000559931 SELLP14151 372 aa11.94□□□□□ -0.5
SMAD6-204ENST00000559931 RAB6AP20340 208 aa11.94□□□□□ -0.5
SMAD6-204ENST00000559931 BLVRBP30043 206 aaPredicted RBP11.94□□□□□ -0.5
SMAD6-204ENST00000559931 IL2RGP31785 369 aa11.94□□□□□ -0.5
SMAD6-204ENST00000559931 VEGFCP49767 419 aa11.94□□□□□ -0.5
SMAD6-204ENST00000559931 EFNB2P52799 333 aa11.94□□□□□ -0.5
SMAD6-204ENST00000559931 PLA2G7Q13093 441 aa11.94□□□□□ -0.5
SMAD6-204ENST00000559931 PAN3Q58A45 887 aaKnown RBP11.94□□□□□ -0.5
SMAD6-204ENST00000559931 NKAPLQ5M9Q1 402 aa11.94□□□□□ -0.5
SMAD6-204ENST00000559931 BRICD5Q6PL45 260 aa11.94□□□□□ -0.5
SMAD6-204ENST00000559931 DUX4L9Q6RFH8 374 aaPredicted RBP11.94□□□□□ -0.5
SMAD6-204ENST00000559931 SAMD12Q8N8I0 201 aa11.94□□□□□ -0.5
SMAD6-204ENST00000559931 CHST4Q8NCG5 386 aa11.94□□□□□ -0.5
SMAD6-204ENST00000559931 OR5D13Q8NGL4 314 aa11.94□□□□□ -0.5
SMAD6-204ENST00000559931 H1FXQ92522 213 aaKnown RBP11.94□□□□□ -0.5
SMAD6-204ENST00000559931 SNX22Q96L94 193 aa11.94□□□□□ -0.5
SMAD6-204ENST00000559931 NICN1Q9BSH3 213 aa11.94□□□□□ -0.5
SMAD6-204ENST00000559931 SSBP3Q9BWW4 388 aaPredicted RBP11.94□□□□□ -0.5
SMAD6-204ENST00000559931 CHST6Q9GZX3 395 aa11.94□□□□□ -0.5
SMAD6-204ENST00000559931 LPAR5Q9H1C0 372 aa11.94□□□□□ -0.5
SMAD6-204ENST00000559931 SEBOXQ9HB31 216 aaPredicted RBP11.94□□□□□ -0.5
SMAD6-204ENST00000559931 ING3Q9NXR8 418 aa11.94□□□□□ -0.5
SMAD6-204ENST00000559931 CTSZQ9UBR2 303 aa11.94□□□□□ -0.5
SMAD6-204ENST00000559931 DUX4Q9UBX2 424 aa11.94□□□□□ -0.5
SMAD6-204ENST00000559931 FBLN5Q9UBX5 448 aa11.94□□□□□ -0.5
SMAD6-204ENST00000559931 SPATA2Q9UM82 520 aa11.94□□□□□ -0.5
SMAD6-204ENST00000559931 PEX16Q9Y5Y5 336 aa11.94□□□□□ -0.5
SMAD6-204ENST00000559931 YLPM1P49750 1951 aaKnown RBP11.93□□□□□ -0.5
SMAD6-204ENST00000559931 TMEM82A0PJX8 343 aa11.93□□□□□ -0.5
SMAD6-204ENST00000559931 FAM90A10PA6NDY2 464 aa11.93□□□□□ -0.5
SMAD6-204ENST00000559931 FAM90A18PA6NE21 464 aa11.93□□□□□ -0.5
SMAD6-204ENST00000559931 FAM90A16PA6NEW6 464 aa11.93□□□□□ -0.5
SMAD6-204ENST00000559931 FAM90A20PA6NIJ5 464 aa11.93□□□□□ -0.5
SMAD6-204ENST00000559931 FAM90A8PA6NJQ4 464 aa11.93□□□□□ -0.5
SMAD6-204ENST00000559931 FAM90A7PA6NKC0 464 aa11.93□□□□□ -0.5
SMAD6-204ENST00000559931 FAM90A22PA8MWA6 464 aa11.93□□□□□ -0.5
SMAD6-204ENST00000559931 FAM90A12PA8MX19 464 aa11.93□□□□□ -0.5
SMAD6-204ENST00000559931 FAM90A5PA8MXJ8 464 aa11.93□□□□□ -0.5
SMAD6-204ENST00000559931 FAM90A23PA8MXZ1 464 aa11.93□□□□□ -0.5
SMAD6-204ENST00000559931 MCRIP1C9JLW8 97 aa11.93□□□□□ -0.5
SMAD6-204ENST00000559931 SLC33A1O00400 549 aaPredicted RBP11.93□□□□□ -0.5
SMAD6-204ENST00000559931 PHF1O43189 567 aaPredicted RBP11.93□□□□□ -0.5
SMAD6-204ENST00000559931 TK1P04183 234 aa11.93□□□□□ -0.5
SMAD6-204ENST00000559931 FAM90A15PP0C7V4 464 aa11.93□□□□□ -0.5
SMAD6-204ENST00000559931 FAM90A13PP0C7W8 464 aa11.93□□□□□ -0.5
SMAD6-204ENST00000559931 FAM90A14PP0C7W9 464 aa11.93□□□□□ -0.5
SMAD6-204ENST00000559931 FAM90A24PP0C7X0 464 aa11.93□□□□□ -0.5
SMAD6-204ENST00000559931 FUT3P21217 361 aa11.93□□□□□ -0.5
SMAD6-204ENST00000559931 NPY4RP50391 375 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms