RNA–Protein interactions for RNA: ENST00000559849.5

CHRNB4-204, Transcript of cholinergic receptor nicotinic beta 4 subunit, human

TSL 1 (best)

Gene CHRNB4, Length 2,080 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHRNB4-204	ENST00000559849	PDCD1	Q15116	288 aa		11.26	□□□□□ -0.61
CHRNB4-204	ENST00000559849	DDI2	Q5TDH0	399 aa		11.26	□□□□□ -0.61
CHRNB4-204	ENST00000559849	GPR157	Q5UAW9	335 aa		11.26	□□□□□ -0.61
CHRNB4-204	ENST00000559849	C1orf122	Q6ZSJ8	110 aa		11.26	□□□□□ -0.61
CHRNB4-204	ENST00000559849	USP43	Q70EL4	1123 aa		11.26	□□□□□ -0.61
CHRNB4-204	ENST00000559849	TNFAIP8L1	Q8WVP5	186 aa		11.26	□□□□□ -0.61
CHRNB4-204	ENST00000559849	SNX22	Q96L94	193 aa		11.26	□□□□□ -0.61
CHRNB4-204	ENST00000559849	DERL3	Q96Q80	235 aa		11.26	□□□□□ -0.61
CHRNB4-204	ENST00000559849	TBX15	Q96SF7	602 aa		11.26	□□□□□ -0.61
CHRNB4-204	ENST00000559849	MS4A7	Q9GZW8	240 aa	Predicted RBP	11.26	□□□□□ -0.61
CHRNB4-204	ENST00000559849	ELL3	Q9HB65	397 aa	Predicted RBP	11.26	□□□□□ -0.61
CHRNB4-204	ENST00000559849	IL36RN	Q9UBH0	155 aa		11.26	□□□□□ -0.61
CHRNB4-204	ENST00000559849	ZNF69	Q9UC07	566 aa		11.26	□□□□□ -0.61
CHRNB4-204	ENST00000559849	FOXJ3	Q9UPW0	622 aa		11.26	□□□□□ -0.61
CHRNB4-204	ENST00000559849	GSTK1	Q9Y2Q3	226 aa		11.26	□□□□□ -0.61
CHRNB4-204	ENST00000559849	CEPT1	Q9Y6K0	416 aa		11.26	□□□□□ -0.61
CHRNB4-204	ENST00000559849	GABRP	O00591	440 aa		11.26	□□□□□ -0.61
CHRNB4-204	ENST00000559849	SH2D1B	O14796	132 aa		11.26	□□□□□ -0.61
CHRNB4-204	ENST00000559849	ZNF737	O75373	536 aa		11.26	□□□□□ -0.61
CHRNB4-204	ENST00000559849	HSMCR30	P0CW71	290 aa		11.26	□□□□□ -0.61
CHRNB4-204	ENST00000559849	CALCB	P10092	127 aa		11.26	□□□□□ -0.61
CHRNB4-204	ENST00000559849	DUSP1	P28562	367 aa		11.26	□□□□□ -0.61
CHRNB4-204	ENST00000559849	PTGFR	P43088	359 aa		11.26	□□□□□ -0.61
CHRNB4-204	ENST00000559849	BMX	P51813	675 aa		11.26	□□□□□ -0.61
CHRNB4-204	ENST00000559849	RPL31	P62899	125 aa	Known RBP	11.26	□□□□□ -0.61
CHRNB4-204	ENST00000559849	ACSM3	Q53FZ2	586 aa		11.26	□□□□□ -0.61
CHRNB4-204	ENST00000559849	UFD1	Q92890	307 aa		11.26	□□□□□ -0.61
CHRNB4-204	ENST00000559849	SUCNR1	Q9BXA5	334 aa		11.26	□□□□□ -0.61
CHRNB4-204	ENST00000559849	RSL24D1	Q9UHA3	163 aa	Known RBP	11.26	□□□□□ -0.61
CHRNB4-204	ENST00000559849	TRAV8-7	A0A075B6U6	113 aa		11.25	□□□□□ -0.61
CHRNB4-204	ENST00000559849		A0A1W2PPH5	198 aa		11.25	□□□□□ -0.61
CHRNB4-204	ENST00000559849	MTNR1B	P49286	362 aa		11.25	□□□□□ -0.61
CHRNB4-204	ENST00000559849	EMX1	Q04741	257 aa	Predicted RBP	11.25	□□□□□ -0.61
CHRNB4-204	ENST00000559849	TPBG	Q13641	420 aa		11.25	□□□□□ -0.61
CHRNB4-204	ENST00000559849	TBCE	Q15813	527 aa	Predicted RBP	11.25	□□□□□ -0.61
CHRNB4-204	ENST00000559849	LIPK	Q5VXJ0	399 aa		11.25	□□□□□ -0.61
CHRNB4-204	ENST00000559849	ELP2	Q6IA86	826 aa		11.25	□□□□□ -0.61
CHRNB4-204	ENST00000559849	ASCL4	Q6XD76	172 aa		11.25	□□□□□ -0.61
CHRNB4-204	ENST00000559849	C9orf139	Q6ZV77	190 aa		11.25	□□□□□ -0.61
CHRNB4-204	ENST00000559849	GDPD3	Q7L5L3	318 aa		11.25	□□□□□ -0.61
CHRNB4-204	ENST00000559849	OR8H2	Q8N162	312 aa		11.25	□□□□□ -0.61
CHRNB4-204	ENST00000559849	S100A13	Q99584	98 aa		11.25	□□□□□ -0.61
CHRNB4-204	ENST00000559849	MGLL	Q99685	303 aa		11.25	□□□□□ -0.61
CHRNB4-204	ENST00000559849	TMED9	Q9BVK6	235 aa		11.25	□□□□□ -0.61
CHRNB4-204	ENST00000559849	NOX4	Q9NPH5	578 aa		11.25	□□□□□ -0.61
CHRNB4-204	ENST00000559849	IGHV3OR16-10	A0A075B7F0	116 aa		11.24	□□□□□ -0.61
CHRNB4-204	ENST00000559849	CENPVL3	A0A0U1RRI6	287 aa		11.24	□□□□□ -0.61
CHRNB4-204	ENST00000559849		M0R1W7	72 aa		11.24	□□□□□ -0.61
CHRNB4-204	ENST00000559849	PIN1P1	O15428	100 aa		11.24	□□□□□ -0.61
CHRNB4-204	ENST00000559849	MAP2K4	P45985	399 aa		11.24	□□□□□ -0.61
CHRNB4-204	ENST00000559849	SNU13	P55769	128 aa	Known RBP	11.24	□□□□□ -0.61
CHRNB4-204	ENST00000559849	MLLT11	Q13015	90 aa	Predicted RBP	11.24	□□□□□ -0.61
CHRNB4-204	ENST00000559849	RSU1	Q15404	277 aa		11.24	□□□□□ -0.61
CHRNB4-204	ENST00000559849	UNQ9370/PRO34162	Q6UXP9	181 aa		11.24	□□□□□ -0.61
CHRNB4-204	ENST00000559849	RBMS3	Q6XE24	437 aa	Known RBP	11.24	□□□□□ -0.61
CHRNB4-204	ENST00000559849	C17orf107	Q6ZR85	190 aa		11.24	□□□□□ -0.61
CHRNB4-204	ENST00000559849	VMO1	Q7Z5L0	202 aa		11.24	□□□□□ -0.61
CHRNB4-204	ENST00000559849	CDH26	Q8IXH8	852 aa		11.24	□□□□□ -0.61
CHRNB4-204	ENST00000559849	IQCF2	Q8IXL9	164 aa		11.24	□□□□□ -0.61
CHRNB4-204	ENST00000559849	FAM185A	Q8N0U4	392 aa		11.24	□□□□□ -0.61
CHRNB4-204	ENST00000559849	SVOP	Q8N4V2	548 aa		11.24	□□□□□ -0.61
CHRNB4-204	ENST00000559849	OR4M1	Q8NGD0	313 aa		11.24	□□□□□ -0.61
CHRNB4-204	ENST00000559849	PPP1R35	Q8TAP8	253 aa		11.24	□□□□□ -0.61
CHRNB4-204	ENST00000559849	SLC6A7	Q99884	636 aa		11.24	□□□□□ -0.61
CHRNB4-204	ENST00000559849	EXOSC4	Q9NPD3	245 aa	Known RBP	11.24	□□□□□ -0.61
CHRNB4-204	ENST00000559849	C19orf12	Q9NSK7	152 aa		11.24	□□□□□ -0.61
CHRNB4-204	ENST00000559849	DSCAML1	Q8TD84	2053 aa		11.24	□□□□□ -0.61
CHRNB4-204	ENST00000559849	MAS1	P04201	325 aa		11.24	□□□□□ -0.61
CHRNB4-204	ENST00000559849	GABRR1	P24046	479 aa		11.24	□□□□□ -0.61
CHRNB4-204	ENST00000559849	LMO1	P25800	156 aa		11.24	□□□□□ -0.61
CHRNB4-204	ENST00000559849	OR3A4P	P47883	348 aa		11.24	□□□□□ -0.61
CHRNB4-204	ENST00000559849	TUSC1	Q2TAM9	212 aa		11.24	□□□□□ -0.61
CHRNB4-204	ENST00000559849	TMEM200B	Q69YZ2	307 aa		11.24	□□□□□ -0.61
CHRNB4-204	ENST00000559849		Q8N7P7	452 aa		11.24	□□□□□ -0.61
CHRNB4-204	ENST00000559849		Q8NFD4	153 aa		11.24	□□□□□ -0.61
CHRNB4-204	ENST00000559849	OR13F1	Q8NGS4	319 aa		11.24	□□□□□ -0.61
CHRNB4-204	ENST00000559849	TMEM158	Q8WZ71	300 aa		11.24	□□□□□ -0.61
CHRNB4-204	ENST00000559849	LHX4	Q969G2	390 aa		11.24	□□□□□ -0.61
CHRNB4-204	ENST00000559849	MUL1	Q969V5	352 aa		11.24	□□□□□ -0.61
CHRNB4-204	ENST00000559849	JMJD8	Q96S16	334 aa		11.24	□□□□□ -0.61
CHRNB4-204	ENST00000559849	METTL8	Q9H825	291 aa	Known RBP	11.24	□□□□□ -0.61
CHRNB4-204	ENST00000559849	PALMD	Q9NP74	551 aa		11.24	□□□□□ -0.61
CHRNB4-204	ENST00000559849	PCDHB16	Q9NRJ7	776 aa		11.24	□□□□□ -0.61
CHRNB4-204	ENST00000559849	TMEM82	A0PJX8	343 aa		11.23	□□□□□ -0.61
CHRNB4-204	ENST00000559849	MEGF11	A6BM72	1044 aa		11.23	□□□□□ -0.61
CHRNB4-204	ENST00000559849	SC5D	O75845	299 aa		11.23	□□□□□ -0.61
CHRNB4-204	ENST00000559849	RGS9	O75916	674 aa	Predicted RBP	11.23	□□□□□ -0.61
CHRNB4-204	ENST00000559849	CDRT1	O95170	752 aa		11.23	□□□□□ -0.61
CHRNB4-204	ENST00000559849	OR2H2	O95918	312 aa		11.23	□□□□□ -0.61
CHRNB4-204	ENST00000559849	GSTT2	P0CG29	244 aa		11.23	□□□□□ -0.61
CHRNB4-204	ENST00000559849	GSTT2B	P0CG30	244 aa		11.23	□□□□□ -0.61
CHRNB4-204	ENST00000559849	CPE	P16870	476 aa		11.23	□□□□□ -0.61
CHRNB4-204	ENST00000559849	EDDM3B	P56851	147 aa		11.23	□□□□□ -0.61
CHRNB4-204	ENST00000559849	HILS1	P60008	231 aa		11.23	□□□□□ -0.61
CHRNB4-204	ENST00000559849	INSL4	Q14641	139 aa		11.23	□□□□□ -0.61
CHRNB4-204	ENST00000559849	TRAM1	Q15629	374 aa		11.23	□□□□□ -0.61
CHRNB4-204	ENST00000559849	METAP1D	Q6UB28	335 aa	Predicted RBP	11.23	□□□□□ -0.61
CHRNB4-204	ENST00000559849	BRD3OS	Q6XYD6	125 aa		11.23	□□□□□ -0.61
CHRNB4-204	ENST00000559849	CLVS1	Q8IUQ0	354 aa	Predicted RBP	11.23	□□□□□ -0.61
CHRNB4-204	ENST00000559849	BCL6B	Q8N143	479 aa	Predicted RBP	11.23	□□□□□ -0.61

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