RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 MRM2Q9UI43 246 aaKnown RBP5.95□□□□□ -1.46
SPG11-213ENST00000558988 GNG8Q9UK08 70 aa5.95□□□□□ -1.46
SPG11-213ENST00000558988 ZNF222Q9UK12 451 aa5.95□□□□□ -1.46
SPG11-213ENST00000558988 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.95□□□□□ -1.46
SPG11-213ENST00000558988 FOXJ3Q9UPW0 622 aa5.95□□□□□ -1.46
SPG11-213ENST00000558988 SLC7A11Q9UPY5 501 aa5.95□□□□□ -1.46
SPG11-213ENST00000558988 AP4S1Q9Y587 144 aa5.95□□□□□ -1.46
SPG11-213ENST00000558988 SNX5Q9Y5X3 404 aa5.95□□□□□ -1.46
SPG11-213ENST00000558988 WNK1Q9H4A3 2382 aa5.95□□□□□ -1.46
SPG11-213ENST00000558988 A0A1B0GTI1 187 aa5.94□□□□□ -1.46
SPG11-213ENST00000558988 hCG_1809904A0A1W2PP81 198 aa5.94□□□□□ -1.46
SPG11-213ENST00000558988 A0A1W2PPE2 198 aa5.94□□□□□ -1.46
SPG11-213ENST00000558988 A0A1W2PPH5 198 aa5.94□□□□□ -1.46
SPG11-213ENST00000558988 A0A1W2PQL4 384 aaPredicted RBP5.94□□□□□ -1.46
SPG11-213ENST00000558988 A0A1W2PR64 198 aa5.94□□□□□ -1.46
SPG11-213ENST00000558988 A0A1W2PRV1 198 aa5.94□□□□□ -1.46
SPG11-213ENST00000558988 DLGAP1O14490 977 aa5.94□□□□□ -1.46
SPG11-213ENST00000558988 SYT7O43581 403 aa5.94□□□□□ -1.46
SPG11-213ENST00000558988 CIB2O75838 187 aa5.94□□□□□ -1.46
SPG11-213ENST00000558988 ARG1P05089 322 aa5.94□□□□□ -1.46
SPG11-213ENST00000558988 CSF1P09603 554 aa5.94□□□□□ -1.46
SPG11-213ENST00000558988 OCM2P0CE71 109 aa5.94□□□□□ -1.46
SPG11-213ENST00000558988 OCMP0CE72 109 aaPredicted RBP5.94□□□□□ -1.46
SPG11-213ENST00000558988 PGA5P0DJD9 388 aa5.94□□□□□ -1.46
SPG11-213ENST00000558988 GYPEP15421 78 aa5.94□□□□□ -1.46
SPG11-213ENST00000558988 FASP25445 335 aa5.94□□□□□ -1.46
SPG11-213ENST00000558988 DUSP1P28562 367 aa5.94□□□□□ -1.46
SPG11-213ENST00000558988 RAB13P51153 203 aa5.94□□□□□ -1.46
SPG11-213ENST00000558988 HABP2Q14520 560 aaPredicted RBP5.94□□□□□ -1.46
SPG11-213ENST00000558988 FAM189A2Q15884 450 aa5.94□□□□□ -1.46
SPG11-213ENST00000558988 TP53I3Q53FA7 332 aa5.94□□□□□ -1.46
SPG11-213ENST00000558988 AADACL4Q5VUY2 407 aa5.94□□□□□ -1.46
SPG11-213ENST00000558988 NXNL2Q5VZ03 156 aa5.94□□□□□ -1.46
SPG11-213ENST00000558988 Q6ZTK2 550 aa5.94□□□□□ -1.46
SPG11-213ENST00000558988 SLC25A26Q70HW3 274 aa5.94□□□□□ -1.46
SPG11-213ENST00000558988 GDPD3Q7L5L3 318 aa5.94□□□□□ -1.46
SPG11-213ENST00000558988 FAM220AQ7Z4H9 259 aa5.94□□□□□ -1.46
SPG11-213ENST00000558988 LHFPL4Q7Z7J7 247 aa5.94□□□□□ -1.46
SPG11-213ENST00000558988 TMEM219Q86XT9 240 aa5.94□□□□□ -1.46
SPG11-213ENST00000558988 RDH10Q8IZV5 341 aa5.94□□□□□ -1.46
SPG11-213ENST00000558988 ZNF561Q8N587 486 aa5.94□□□□□ -1.46
SPG11-213ENST00000558988 KLHDC1Q8N7A1 406 aa5.94□□□□□ -1.46
SPG11-213ENST00000558988 TPRX1Q8N7U7 411 aa5.94□□□□□ -1.46
SPG11-213ENST00000558988 PPP1R35Q8TAP8 253 aa5.94□□□□□ -1.46
SPG11-213ENST00000558988 RFT1Q96AA3 541 aa5.94□□□□□ -1.46
SPG11-213ENST00000558988 SDSLQ96GA7 329 aa5.94□□□□□ -1.46
SPG11-213ENST00000558988 CEP19Q96LK0 163 aa5.94□□□□□ -1.46
SPG11-213ENST00000558988 OR5M11Q96RB7 305 aa5.94□□□□□ -1.46
SPG11-213ENST00000558988 NRIP2Q9BQI9 281 aa5.94□□□□□ -1.46
SPG11-213ENST00000558988 CHST6Q9GZX3 395 aa5.94□□□□□ -1.46
SPG11-213ENST00000558988 FAM234AQ9H0X4 552 aa5.94□□□□□ -1.46
SPG11-213ENST00000558988 ZMAT4Q9H898 229 aa5.94□□□□□ -1.46
SPG11-213ENST00000558988 HEXA-AS1Q9H8Q6 139 aa5.94□□□□□ -1.46
SPG11-213ENST00000558988 NEK6Q9HC98 313 aa5.94□□□□□ -1.46
SPG11-213ENST00000558988 IMPAD1Q9NX62 359 aa5.94□□□□□ -1.46
SPG11-213ENST00000558988 RASL12Q9NYN1 266 aa5.94□□□□□ -1.46
SPG11-213ENST00000558988 TET2Q6N021 2002 aaPredicted RBP5.94□□□□□ -1.46
SPG11-213ENST00000558988 LOC107986453A0A1B0GWG9 222 aa5.93□□□□□ -1.46
SPG11-213ENST00000558988 FAM172BPA6NC97 362 aa5.93□□□□□ -1.46
SPG11-213ENST00000558988 METTL15A6NJ78 407 aa5.93□□□□□ -1.46
SPG11-213ENST00000558988 CGB1A6NKQ9 187 aa5.93□□□□□ -1.46
SPG11-213ENST00000558988 F8VVB4 439 aa5.93□□□□□ -1.46
SPG11-213ENST00000558988 F8VWA3 439 aa5.93□□□□□ -1.46
SPG11-213ENST00000558988 CHST1O43916 411 aa5.93□□□□□ -1.46
SPG11-213ENST00000558988 SRSF10O75494 262 aaKnown RBP5.93□□□□□ -1.46
SPG11-213ENST00000558988 CLPXO76031 633 aa5.93□□□□□ -1.46
SPG11-213ENST00000558988 IGLV3-1P01715 115 aa5.93□□□□□ -1.46
SPG11-213ENST00000558988 TK1P04183 234 aa5.93□□□□□ -1.46
SPG11-213ENST00000558988 GABRR1P24046 479 aa5.93□□□□□ -1.46
SPG11-213ENST00000558988 SSX2Q16385 188 aa5.93□□□□□ -1.46
SPG11-213ENST00000558988 C2orf68Q2NKX9 166 aa5.93□□□□□ -1.46
SPG11-213ENST00000558988 KDM4DQ6B0I6 523 aa5.93□□□□□ -1.46
SPG11-213ENST00000558988 TRAPPC6BQ86SZ2 158 aa5.93□□□□□ -1.46
SPG11-213ENST00000558988 CATSPERDQ86XM0 798 aa5.93□□□□□ -1.46
SPG11-213ENST00000558988 EGFL6Q8IUX8 553 aa5.93□□□□□ -1.46
SPG11-213ENST00000558988 OR2T6Q8NHC8 308 aa5.93□□□□□ -1.46
SPG11-213ENST00000558988 EMG1Q92979 244 aaKnown RBP5.93□□□□□ -1.46
SPG11-213ENST00000558988 BORCS8Q96FH0 119 aa5.93□□□□□ -1.46
SPG11-213ENST00000558988 NPFFR1Q9GZQ6 430 aa5.93□□□□□ -1.46
SPG11-213ENST00000558988 ABCB10Q9NRK6 738 aa5.93□□□□□ -1.46
SPG11-213ENST00000558988 IL36RNQ9UBH0 155 aa5.93□□□□□ -1.46
SPG11-213ENST00000558988 WARS2Q9UGM6 360 aaKnown RBP5.93□□□□□ -1.46
SPG11-213ENST00000558988 ENOPH1Q9UHY7 261 aa5.93□□□□□ -1.46
SPG11-213ENST00000558988 HILPDAQ9Y5L2 63 aa5.93□□□□□ -1.46
SPG11-213ENST00000558988 V9GYS6 101 aa5.93□□□□□ -1.46
SPG11-213ENST00000558988 IGKV1-27A0A075B6S5 117 aa5.92□□□□□ -1.46
SPG11-213ENST00000558988 DAPL1A0PJW8 107 aa5.92□□□□□ -1.46
SPG11-213ENST00000558988 SIRPB1O00241 398 aa5.92□□□□□ -1.46
SPG11-213ENST00000558988 GATBO75879 557 aaKnown RBP5.92□□□□□ -1.46
SPG11-213ENST00000558988 TSPAN9O75954 239 aa5.92□□□□□ -1.46
SPG11-213ENST00000558988 SERPINA3P01011 423 aa5.92□□□□□ -1.46
SPG11-213ENST00000558988 PRB2P02812 416 aaPredicted RBP5.92□□□□□ -1.46
SPG11-213ENST00000558988 OR2T7P0C7T2 308 aa5.92□□□□□ -1.46
SPG11-213ENST00000558988 FCGR1AP12314 374 aa5.92□□□□□ -1.46
SPG11-213ENST00000558988 PRKACAP17612 351 aa5.92□□□□□ -1.46
SPG11-213ENST00000558988 HTR1FP30939 366 aa5.92□□□□□ -1.46
SPG11-213ENST00000558988 KIR3DL2P43630 455 aa5.92□□□□□ -1.46
SPG11-213ENST00000558988 RASSF2P50749 326 aa5.92□□□□□ -1.46
SPG11-213ENST00000558988 MTCP1P56278 107 aa5.92□□□□□ -1.46
SPG11-213ENST00000558988 CDC42P60953 191 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms