RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 ENOPH1Q9UHY7 261 aa10.86□□□□□ -0.67
VPS18-203ENST00000558855 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.86□□□□□ -0.67
VPS18-203ENST00000558855 EXOGQ9Y2C4 368 aaKnown RBP10.86□□□□□ -0.67
VPS18-203ENST00000558855 GSTK1Q9Y2Q3 226 aa10.86□□□□□ -0.67
VPS18-203ENST00000558855 NOTCH3Q9UM47 2321 aa10.86□□□□□ -0.67
VPS18-203ENST00000558855 A0A0G2JK05 382 aa10.85□□□□□ -0.67
VPS18-203ENST00000558855 hCG_1809904A0A1W2PP81 198 aa10.85□□□□□ -0.67
VPS18-203ENST00000558855 A0A1W2PPE2 198 aa10.85□□□□□ -0.67
VPS18-203ENST00000558855 A0A1W2PR64 198 aa10.85□□□□□ -0.67
VPS18-203ENST00000558855 A0A1W2PRV1 198 aa10.85□□□□□ -0.67
VPS18-203ENST00000558855 DAPL1A0PJW8 107 aa10.85□□□□□ -0.67
VPS18-203ENST00000558855 FAM90A22PA8MWA6 464 aa10.85□□□□□ -0.67
VPS18-203ENST00000558855 J3QLW9 94 aa10.85□□□□□ -0.67
VPS18-203ENST00000558855 FBXO24O75426 580 aa10.85□□□□□ -0.67
VPS18-203ENST00000558855 KDM4BO94953 1096 aa10.85□□□□□ -0.67
VPS18-203ENST00000558855 HTR1AP08908 422 aa10.85□□□□□ -0.67
VPS18-203ENST00000558855 ZNF19P17023 458 aa10.85□□□□□ -0.67
VPS18-203ENST00000558855 PEX2P28328 305 aa10.85□□□□□ -0.67
VPS18-203ENST00000558855 DYNLT3P51808 116 aa10.85□□□□□ -0.67
VPS18-203ENST00000558855 ZP1P60852 638 aa10.85□□□□□ -0.67
VPS18-203ENST00000558855 CDC42P60953 191 aa10.85□□□□□ -0.67
VPS18-203ENST00000558855 SNRPGP62308 76 aaKnown RBP10.85□□□□□ -0.67
VPS18-203ENST00000558855 SLC34A1Q06495 639 aa10.85□□□□□ -0.67
VPS18-203ENST00000558855 AESQ08117 197 aa10.85□□□□□ -0.67
VPS18-203ENST00000558855 IL18R1Q13478 541 aa10.85□□□□□ -0.67
VPS18-203ENST00000558855 CDK5R1Q15078 307 aa10.85□□□□□ -0.67
VPS18-203ENST00000558855 TCTEX1D4Q5JR98 221 aa10.85□□□□□ -0.67
VPS18-203ENST00000558855 TMEM244Q5VVB8 128 aa10.85□□□□□ -0.67
VPS18-203ENST00000558855 Q6ZPA2 131 aa10.85□□□□□ -0.67
VPS18-203ENST00000558855 LHFPL3Q86UP9 236 aa10.85□□□□□ -0.67
VPS18-203ENST00000558855 ENTHD1Q8IYW4 607 aa10.85□□□□□ -0.67
VPS18-203ENST00000558855 RGP1Q92546 391 aaPredicted RBP10.85□□□□□ -0.67
VPS18-203ENST00000558855 SLC29A1Q99808 456 aa10.85□□□□□ -0.67
VPS18-203ENST00000558855 OCSTAMPQ9BR26 566 aa10.85□□□□□ -0.67
VPS18-203ENST00000558855 COMMD4Q9H0A8 199 aa10.85□□□□□ -0.67
VPS18-203ENST00000558855 RAB18Q9NP72 206 aa10.85□□□□□ -0.67
VPS18-203ENST00000558855 IMPAD1Q9NX62 359 aa10.85□□□□□ -0.67
VPS18-203ENST00000558855 ING3Q9NXR8 418 aa10.85□□□□□ -0.67
VPS18-203ENST00000558855 hADV38S2A0JD32 116 aa10.84□□□□□ -0.67
VPS18-203ENST00000558855 F2RL2O00254 374 aa10.84□□□□□ -0.67
VPS18-203ENST00000558855 MGST3O14880 152 aa10.84□□□□□ -0.67
VPS18-203ENST00000558855 AMY1AP04745 511 aa10.84□□□□□ -0.67
VPS18-203ENST00000558855 AMY2AP04746 511 aa10.84□□□□□ -0.67
VPS18-203ENST00000558855 ZNF20P17024 532 aa10.84□□□□□ -0.67
VPS18-203ENST00000558855 ALKBH1Q13686 389 aaKnown RBP10.84□□□□□ -0.67
VPS18-203ENST00000558855 ATXN7L3Q14CW9 347 aaPredicted RBP10.84□□□□□ -0.67
VPS18-203ENST00000558855 C17orf58Q2M2W7 97 aa10.84□□□□□ -0.67
VPS18-203ENST00000558855 SLC25A30Q5SVS4 291 aa10.84□□□□□ -0.67
VPS18-203ENST00000558855 LPCAT4Q643R3 524 aa10.84□□□□□ -0.67
VPS18-203ENST00000558855 XAF1Q6GPH4 301 aa10.84□□□□□ -0.67
VPS18-203ENST00000558855 C11orf88Q6PI97 169 aa10.84□□□□□ -0.67
VPS18-203ENST00000558855 LHFPL2Q6ZUX7 228 aa10.84□□□□□ -0.67
VPS18-203ENST00000558855 CBR4Q8N4T8 237 aa10.84□□□□□ -0.67
VPS18-203ENST00000558855 CCDC54Q8NEL0 328 aa10.84□□□□□ -0.67
VPS18-203ENST00000558855 OR13C3Q8NGS6 347 aa10.84□□□□□ -0.67
VPS18-203ENST00000558855 NDNFQ8TB73 568 aa10.84□□□□□ -0.67
VPS18-203ENST00000558855 RFKQ969G6 155 aa10.84□□□□□ -0.67
VPS18-203ENST00000558855 CYYR1Q96J86 154 aa10.84□□□□□ -0.67
VPS18-203ENST00000558855 CLEC7AQ9BXN2 247 aa10.84□□□□□ -0.67
VPS18-203ENST00000558855 AMBNQ9NP70 447 aa10.84□□□□□ -0.67
VPS18-203ENST00000558855 A0A1W2PRX2 142 aa10.83□□□□□ -0.68
VPS18-203ENST00000558855 SLC33A1O00400 549 aaPredicted RBP10.83□□□□□ -0.68
VPS18-203ENST00000558855 ZFPL1O95159 310 aa10.83□□□□□ -0.68
VPS18-203ENST00000558855 SERPINA3P01011 423 aa10.83□□□□□ -0.68
VPS18-203ENST00000558855 IGLV1-47P01700 117 aa10.83□□□□□ -0.68
VPS18-203ENST00000558855 MT-ND2P03891 347 aa10.83□□□□□ -0.68
VPS18-203ENST00000558855 DBTP11182 482 aaKnown RBP10.83□□□□□ -0.68
VPS18-203ENST00000558855 PRKACBP22694 351 aa10.83□□□□□ -0.68
VPS18-203ENST00000558855 CDK2P24941 298 aa10.83□□□□□ -0.68
VPS18-203ENST00000558855 LMO1P25800 156 aa10.83□□□□□ -0.68
VPS18-203ENST00000558855 ERP29P30040 261 aaKnown RBP10.83□□□□□ -0.68
VPS18-203ENST00000558855 ALDH3A2P51648 485 aa10.83□□□□□ -0.68
VPS18-203ENST00000558855 CCR9P51686 369 aa10.83□□□□□ -0.68
VPS18-203ENST00000558855 SCN1BQ07699 218 aa10.83□□□□□ -0.68
VPS18-203ENST00000558855 SPIN3Q5JUX0 258 aa10.83□□□□□ -0.68
VPS18-203ENST00000558855 MINOS1Q5TGZ0 78 aa10.83□□□□□ -0.68
VPS18-203ENST00000558855 TRAPPC6BQ86SZ2 158 aa10.83□□□□□ -0.68
VPS18-203ENST00000558855 Q8IYB0 196 aa10.83□□□□□ -0.68
VPS18-203ENST00000558855 OR51A2Q8NGJ7 313 aa10.83□□□□□ -0.68
VPS18-203ENST00000558855 APH1BQ8WW43 257 aa10.83□□□□□ -0.68
VPS18-203ENST00000558855 SPSB1Q96BD6 273 aa10.83□□□□□ -0.68
VPS18-203ENST00000558855 PDCD1LG2Q9BQ51 273 aa10.83□□□□□ -0.68
VPS18-203ENST00000558855 ALG8Q9BVK2 526 aa10.83□□□□□ -0.68
VPS18-203ENST00000558855 EXOSC4Q9NPD3 245 aaKnown RBP10.83□□□□□ -0.68
VPS18-203ENST00000558855 ABCB10Q9NRK6 738 aa10.83□□□□□ -0.68
VPS18-203ENST00000558855 HHLA2Q9UM44 414 aa10.83□□□□□ -0.68
VPS18-203ENST00000558855 MINOS1-NBL1R4GNA1 71 aa10.83□□□□□ -0.68
VPS18-203ENST00000558855 CIB2O75838 187 aa10.82□□□□□ -0.68
VPS18-203ENST00000558855 ATP5HO75947 161 aa10.82□□□□□ -0.68
VPS18-203ENST00000558855 CGB3P0DN86 165 aa10.82□□□□□ -0.68
VPS18-203ENST00000558855 CGB7P0DN87 165 aa10.82□□□□□ -0.68
VPS18-203ENST00000558855 RASSF2P50749 326 aa10.82□□□□□ -0.68
VPS18-203ENST00000558855 GTF2A1P52655 376 aaPredicted RBP10.82□□□□□ -0.68
VPS18-203ENST00000558855 SMN1Q16637 294 aaKnown RBP10.82□□□□□ -0.68
VPS18-203ENST00000558855 ABHD12Q8N2K0 398 aa10.82□□□□□ -0.68
VPS18-203ENST00000558855 ACBD7Q8N6N7 88 aa10.82□□□□□ -0.68
VPS18-203ENST00000558855 TRUB1Q8WWH5 349 aaKnown RBP10.82□□□□□ -0.68
VPS18-203ENST00000558855 CORO2AQ92828 525 aa10.82□□□□□ -0.68
VPS18-203ENST00000558855 LEAP2Q969E1 77 aa10.82□□□□□ -0.68
VPS18-203ENST00000558855 ORAI1Q96D31 301 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms