RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 ELL3Q9HB65 397 aaPredicted RBP3.48□□□□□ -1.85
SPG11-211ENST00000558561 MYOZ1Q9NP98 299 aaPredicted RBP3.48□□□□□ -1.85
SPG11-211ENST00000558561 CYSLTR2Q9NS75 346 aa3.48□□□□□ -1.85
SPG11-211ENST00000558561 CLN6Q9NWW5 311 aa3.48□□□□□ -1.85
SPG11-211ENST00000558561 USE1Q9NZ43 259 aa3.48□□□□□ -1.85
SPG11-211ENST00000558561 ATPIF1Q9UII2 106 aa3.48□□□□□ -1.85
SPG11-211ENST00000558561 OR52A1Q9UKL2 312 aa3.48□□□□□ -1.85
SPG11-211ENST00000558561 IKZF2Q9UKS7 526 aa3.48□□□□□ -1.85
SPG11-211ENST00000558561 KCNS2Q9ULS6 477 aa3.48□□□□□ -1.85
SPG11-211ENST00000558561 PIGLQ9Y2B2 252 aa3.48□□□□□ -1.85
SPG11-211ENST00000558561 EXOGQ9Y2C4 368 aaKnown RBP3.48□□□□□ -1.85
SPG11-211ENST00000558561 FAM96BQ9Y3D0 163 aa3.48□□□□□ -1.85
SPG11-211ENST00000558561 PPIAL4AQ9Y536 164 aa3.48□□□□□ -1.85
SPG11-211ENST00000558561 MAB21L2Q9Y586 359 aa3.48□□□□□ -1.85
SPG11-211ENST00000558561 INSIG2Q9Y5U4 225 aa3.48□□□□□ -1.85
SPG11-211ENST00000558561 DSCAML1Q8TD84 2053 aa3.48□□□□□ -1.85
SPG11-211ENST00000558561 STAB1Q9NY15 2570 aa3.47□□□□□ -1.85
SPG11-211ENST00000558561 IGHV4-28A0A0C4DH34 117 aa3.47□□□□□ -1.85
SPG11-211ENST00000558561 IGKV1-9A0A0C4DH69 117 aa3.47□□□□□ -1.85
SPG11-211ENST00000558561 METTL15A6NJ78 407 aa3.47□□□□□ -1.85
SPG11-211ENST00000558561 NPIPB11E5RHQ5 1161 aa3.47□□□□□ -1.85
SPG11-211ENST00000558561 H3BSA7 217 aa3.47□□□□□ -1.85
SPG11-211ENST00000558561 LGALS8O00214 317 aa3.47□□□□□ -1.85
SPG11-211ENST00000558561 ADAM20O43506 726 aa3.47□□□□□ -1.85
SPG11-211ENST00000558561 XRCC2O43543 280 aa3.47□□□□□ -1.85
SPG11-211ENST00000558561 GMDSO60547 372 aa3.47□□□□□ -1.85
SPG11-211ENST00000558561 CST4P01036 141 aa3.47□□□□□ -1.85
SPG11-211ENST00000558561 ERCC1P07992 297 aaPredicted RBP3.47□□□□□ -1.85
SPG11-211ENST00000558561 FAM157CP0CG43 387 aa3.47□□□□□ -1.85
SPG11-211ENST00000558561 LIMS3P0CW19 117 aa3.47□□□□□ -1.85
SPG11-211ENST00000558561 LIMS4P0CW20 117 aa3.47□□□□□ -1.85
SPG11-211ENST00000558561 ZNF12P17014 697 aa3.47□□□□□ -1.85
SPG11-211ENST00000558561 PAICSP22234 425 aaKnown RBP3.47□□□□□ -1.85
SPG11-211ENST00000558561 TUBG1P23258 451 aa3.47□□□□□ -1.85
SPG11-211ENST00000558561 SLC15A1P46059 708 aa3.47□□□□□ -1.85
SPG11-211ENST00000558561 NPBWR2P48146 333 aa3.47□□□□□ -1.85
SPG11-211ENST00000558561 TGM4P49221 684 aa3.47□□□□□ -1.85
SPG11-211ENST00000558561 SRP9P49458 86 aaKnown RBP3.47□□□□□ -1.85
SPG11-211ENST00000558561 ETV1P50549 477 aa3.47□□□□□ -1.85
SPG11-211ENST00000558561 GPM6AP51674 278 aa3.47□□□□□ -1.85
SPG11-211ENST00000558561 ISL1P61371 349 aa3.47□□□□□ -1.85
SPG11-211ENST00000558561 SNRPGP62308 76 aaKnown RBP3.47□□□□□ -1.85
SPG11-211ENST00000558561 ARF6P62330 175 aa3.47□□□□□ -1.85
SPG11-211ENST00000558561 ADARB1P78563 741 aaKnown RBP3.47□□□□□ -1.85
SPG11-211ENST00000558561 RCN1Q15293 331 aa3.47□□□□□ -1.85
SPG11-211ENST00000558561 OR8B8Q15620 311 aa3.47□□□□□ -1.85
SPG11-211ENST00000558561 DGUOKQ16854 277 aa3.47□□□□□ -1.85
SPG11-211ENST00000558561 FAM76BQ5HYJ3 339 aa3.47□□□□□ -1.85
SPG11-211ENST00000558561 OR2G6Q5TZ20 316 aa3.47□□□□□ -1.85
SPG11-211ENST00000558561 METTL11BQ5VVY1 283 aa3.47□□□□□ -1.85
SPG11-211ENST00000558561 ASPHD2Q6ICH7 369 aa3.47□□□□□ -1.85
SPG11-211ENST00000558561 BRD3OSQ6XYD6 125 aa3.47□□□□□ -1.85
SPG11-211ENST00000558561 CD177Q8N6Q3 437 aa3.47□□□□□ -1.85
SPG11-211ENST00000558561 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.47□□□□□ -1.85
SPG11-211ENST00000558561 ZFP41Q8N8Y5 198 aa3.47□□□□□ -1.85
SPG11-211ENST00000558561 ZDHHC22Q8N966 263 aa3.47□□□□□ -1.85
SPG11-211ENST00000558561 ZNRF1Q8ND25 227 aa3.47□□□□□ -1.85
SPG11-211ENST00000558561 OR52I1Q8NGK6 324 aa3.47□□□□□ -1.85
SPG11-211ENST00000558561 OR8J1Q8NGP2 316 aa3.47□□□□□ -1.85
SPG11-211ENST00000558561 OR51F2Q8NH61 342 aa3.47□□□□□ -1.85
SPG11-211ENST00000558561 C17orf50Q8WW18 174 aa3.47□□□□□ -1.85
SPG11-211ENST00000558561 RGP1Q92546 391 aaPredicted RBP3.47□□□□□ -1.85
SPG11-211ENST00000558561 GGHQ92820 318 aa3.47□□□□□ -1.85
SPG11-211ENST00000558561 FGGYQ96C11 551 aa3.47□□□□□ -1.85
SPG11-211ENST00000558561 ADAT3Q96EY9 351 aaPredicted RBP3.47□□□□□ -1.85
SPG11-211ENST00000558561 NR1H4Q96RI1 486 aaPredicted RBP3.47□□□□□ -1.85
SPG11-211ENST00000558561 TBX15Q96SF7 602 aa3.47□□□□□ -1.85
SPG11-211ENST00000558561 CNN2Q99439 309 aaKnown RBP3.47□□□□□ -1.85
SPG11-211ENST00000558561 SLC6A7Q99884 636 aa3.47□□□□□ -1.85
SPG11-211ENST00000558561 RBM4BQ9BQ04 359 aaKnown RBP3.47□□□□□ -1.85
SPG11-211ENST00000558561 DCTN5Q9BTE1 182 aa3.47□□□□□ -1.85
SPG11-211ENST00000558561 PAPOLGQ9BWT3 736 aaKnown RBP3.47□□□□□ -1.85
SPG11-211ENST00000558561 OR51I2Q9H344 312 aa3.47□□□□□ -1.85
SPG11-211ENST00000558561 TUBG2Q9NRH3 451 aa3.47□□□□□ -1.85
SPG11-211ENST00000558561 TNFRSF19Q9NS68 423 aa3.47□□□□□ -1.85
SPG11-211ENST00000558561 ACOXLQ9NUZ1 547 aa3.47□□□□□ -1.85
SPG11-211ENST00000558561 HAO2Q9NYQ3 351 aa3.47□□□□□ -1.85
SPG11-211ENST00000558561 OR6C3Q9NZP0 311 aa3.47□□□□□ -1.85
SPG11-211ENST00000558561 MRPL15Q9P015 296 aaKnown RBP3.47□□□□□ -1.85
SPG11-211ENST00000558561 ZNF581Q9P0T4 197 aa3.47□□□□□ -1.85
SPG11-211ENST00000558561 ERVK-18Q9QC07 812 aa3.47□□□□□ -1.85
SPG11-211ENST00000558561 ZNF391Q9UJN7 358 aa3.47□□□□□ -1.85
SPG11-211ENST00000558561 GNG8Q9UK08 70 aa3.47□□□□□ -1.85
SPG11-211ENST00000558561 FBXO9Q9UK97 447 aaPredicted RBP3.47□□□□□ -1.85
SPG11-211ENST00000558561 GMPPBQ9Y5P6 360 aa3.47□□□□□ -1.85
SPG11-211ENST00000558561 R4GMQ9 66 aa3.47□□□□□ -1.85
SPG11-211ENST00000558561 V9GYS6 101 aa3.47□□□□□ -1.85
SPG11-211ENST00000558561 TENM1Q9UKZ4 2725 aa3.47□□□□□ -1.85
SPG11-211ENST00000558561 CMYA5Q8N3K9 4069 aa3.46□□□□□ -1.85
SPG11-211ENST00000558561 IGKV1D-17A0A075B6S4 117 aa3.46□□□□□ -1.86
SPG11-211ENST00000558561 IGKV1-12A0A0C4DH73 117 aa3.46□□□□□ -1.86
SPG11-211ENST00000558561 A0A0U1RQV5 110 aa3.46□□□□□ -1.86
SPG11-211ENST00000558561 KIR2DS1A0A191URI9 304 aa3.46□□□□□ -1.86
SPG11-211ENST00000558561 A0A1W2PPH5 198 aa3.46□□□□□ -1.86
SPG11-211ENST00000558561 FAM230AA0A1W2PPH8 454 aa3.46□□□□□ -1.86
SPG11-211ENST00000558561 A0A1W2PPK0 400 aa3.46□□□□□ -1.86
SPG11-211ENST00000558561 hCG_1807616A0A1W2PRN6 198 aa3.46□□□□□ -1.86
SPG11-211ENST00000558561 OOEPA6NGQ2 149 aa3.46□□□□□ -1.86
SPG11-211ENST00000558561 FAM90A8PA6NJQ4 464 aa3.46□□□□□ -1.86
SPG11-211ENST00000558561 OR4C45A6NMZ5 311 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms