RNA–Protein interactions for RNA: ENST00000558471.5

LRRC28-206, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-206ENST00000558471 A0A0G2JK05 382 aa10.29□□□□□ -0.76
LRRC28-206ENST00000558471 A0A1W2PQ09 198 aa10.29□□□□□ -0.76
LRRC28-206ENST00000558471 SIRPB1O00241 398 aa10.29□□□□□ -0.76
LRRC28-206ENST00000558471 CCRL2O00421 344 aa10.29□□□□□ -0.76
LRRC28-206ENST00000558471 TOX4O94842 621 aa10.29□□□□□ -0.76
LRRC28-206ENST00000558471 OR2H2O95918 312 aa10.29□□□□□ -0.76
LRRC28-206ENST00000558471 LMO1P25800 156 aa10.29□□□□□ -0.76
LRRC28-206ENST00000558471 BMXP51813 675 aa10.29□□□□□ -0.76
LRRC28-206ENST00000558471 SCN1BQ07699 218 aa10.29□□□□□ -0.76
LRRC28-206ENST00000558471 KIAA2026Q5HYC2 2103 aa10.29□□□□□ -0.76
LRRC28-206ENST00000558471 METTL11BQ5VVY1 283 aa10.29□□□□□ -0.76
LRRC28-206ENST00000558471 GLIPR1L1Q6UWM5 242 aa10.29□□□□□ -0.76
LRRC28-206ENST00000558471 OR8H2Q8N162 312 aa10.29□□□□□ -0.76
LRRC28-206ENST00000558471 OR4S1Q8NGB4 309 aa10.29□□□□□ -0.76
LRRC28-206ENST00000558471 OR51T1Q8NGJ9 327 aa10.29□□□□□ -0.76
LRRC28-206ENST00000558471 OR5D13Q8NGL4 314 aa10.29□□□□□ -0.76
LRRC28-206ENST00000558471 TBX15Q96SF7 602 aa10.29□□□□□ -0.76
LRRC28-206ENST00000558471 S100A13Q99584 98 aa10.29□□□□□ -0.76
LRRC28-206ENST00000558471 PCGF1Q9BSM1 259 aa10.29□□□□□ -0.76
LRRC28-206ENST00000558471 CHST6Q9GZX3 395 aa10.29□□□□□ -0.76
LRRC28-206ENST00000558471 IL36GQ9NZH8 169 aa10.29□□□□□ -0.76
LRRC28-206ENST00000558471 ONECUT1Q9UBC0 465 aa10.29□□□□□ -0.76
LRRC28-206ENST00000558471 MRPS28Q9Y2Q9 187 aaKnown RBP10.29□□□□□ -0.76
LRRC28-206ENST00000558471 IGHV3OR16-10A0A075B7F0 116 aa10.28□□□□□ -0.76
LRRC28-206ENST00000558471 TRBV23-1A0A0A0MS06 115 aa10.28□□□□□ -0.76
LRRC28-206ENST00000558471 TRDV1A0A1B0GX56 115 aa10.28□□□□□ -0.76
LRRC28-206ENST00000558471 A0A1W2PP11 408 aa10.28□□□□□ -0.76
LRRC28-206ENST00000558471 DEGS1O15121 323 aa10.28□□□□□ -0.76
LRRC28-206ENST00000558471 ARL6IP5O75915 188 aa10.28□□□□□ -0.76
LRRC28-206ENST00000558471 TNFAIP8O95379 198 aa10.28□□□□□ -0.76
LRRC28-206ENST00000558471 CSTBP04080 98 aaKnown RBP10.28□□□□□ -0.76
LRRC28-206ENST00000558471 IGHV4-38-2P0DP08 117 aa10.28□□□□□ -0.76
LRRC28-206ENST00000558471 CD37P11049 281 aa10.28□□□□□ -0.76
LRRC28-206ENST00000558471 ZNF44P15621 663 aa10.28□□□□□ -0.76
LRRC28-206ENST00000558471 SERPINA2P20848 420 aa10.28□□□□□ -0.76
LRRC28-206ENST00000558471 GABRR1P24046 479 aa10.28□□□□□ -0.76
LRRC28-206ENST00000558471 RPL31P62899 125 aaKnown RBP10.28□□□□□ -0.76
LRRC28-206ENST00000558471 GRK1Q15835 563 aa10.28□□□□□ -0.76
LRRC28-206ENST00000558471 NEDD8Q15843 81 aa10.28□□□□□ -0.76
LRRC28-206ENST00000558471 PIGYQ3MUY2 71 aa10.28□□□□□ -0.76
LRRC28-206ENST00000558471 SLC22A6Q4U2R8 563 aa10.28□□□□□ -0.76
LRRC28-206ENST00000558471 SYT6Q5T7P8 510 aaPredicted RBP10.28□□□□□ -0.76
LRRC28-206ENST00000558471 GLT8D1Q68CQ7 371 aa10.28□□□□□ -0.76
LRRC28-206ENST00000558471 TMEM200BQ69YZ2 307 aa10.28□□□□□ -0.76
LRRC28-206ENST00000558471 AWAT2Q6E213 333 aa10.28□□□□□ -0.76
LRRC28-206ENST00000558471 CD200R1LQ6Q8B3 271 aa10.28□□□□□ -0.76
LRRC28-206ENST00000558471 FAM185AQ8N0U4 392 aa10.28□□□□□ -0.76
LRRC28-206ENST00000558471 Q8N7P7 452 aa10.28□□□□□ -0.76
LRRC28-206ENST00000558471 FOXRED1Q96CU9 486 aaPredicted RBP10.28□□□□□ -0.76
LRRC28-206ENST00000558471 C1orf147Q96MC9 270 aaPredicted RBP10.28□□□□□ -0.76
LRRC28-206ENST00000558471 GFI1Q99684 422 aa10.28□□□□□ -0.76
LRRC28-206ENST00000558471 UQCC2Q9BRT2 126 aa10.28□□□□□ -0.76
LRRC28-206ENST00000558471 SLITRK2Q9H156 845 aa10.28□□□□□ -0.76
LRRC28-206ENST00000558471 NUP50Q9UKX7 468 aa10.28□□□□□ -0.76
LRRC28-206ENST00000558471 ST3GAL6Q9Y274 331 aa10.28□□□□□ -0.76
LRRC28-206ENST00000558471 KPTNQ9Y664 436 aa10.28□□□□□ -0.76
LRRC28-206ENST00000558471 TRAV40A0A0B4J280 105 aa10.27□□□□□ -0.77
LRRC28-206ENST00000558471 SLC33A1O00400 549 aaPredicted RBP10.27□□□□□ -0.77
LRRC28-206ENST00000558471 ZNF780AO75290 641 aaPredicted RBP10.27□□□□□ -0.77
LRRC28-206ENST00000558471 IFNA2P01563 188 aa10.27□□□□□ -0.77
LRRC28-206ENST00000558471 EPHA1P21709 976 aa10.27□□□□□ -0.77
LRRC28-206ENST00000558471 CALRP27797 417 aaKnown RBP10.27□□□□□ -0.77
LRRC28-206ENST00000558471 OR3A1P47881 315 aa10.27□□□□□ -0.77
LRRC28-206ENST00000558471 EDDM3BP56851 147 aa10.27□□□□□ -0.77
LRRC28-206ENST00000558471 GPR176Q14439 515 aa10.27□□□□□ -0.77
LRRC28-206ENST00000558471 EDDM3AQ14507 147 aa10.27□□□□□ -0.77
LRRC28-206ENST00000558471 IL13RA2Q14627 380 aa10.27□□□□□ -0.77
LRRC28-206ENST00000558471 C1orf100Q5SVJ3 147 aa10.27□□□□□ -0.77
LRRC28-206ENST00000558471 GDPD3Q7L5L3 318 aa10.27□□□□□ -0.77
LRRC28-206ENST00000558471 VMO1Q7Z5L0 202 aa10.27□□□□□ -0.77
LRRC28-206ENST00000558471 OSR2Q8N2R0 312 aa10.27□□□□□ -0.77
LRRC28-206ENST00000558471 KIR3DL3Q8N743 410 aa10.27□□□□□ -0.77
LRRC28-206ENST00000558471 TPRX1Q8N7U7 411 aa10.27□□□□□ -0.77
LRRC28-206ENST00000558471 TSPAN14Q8NG11 270 aa10.27□□□□□ -0.77
LRRC28-206ENST00000558471 PPP1R35Q8TAP8 253 aa10.27□□□□□ -0.77
LRRC28-206ENST00000558471 TBC1D15Q8TC07 691 aa10.27□□□□□ -0.77
LRRC28-206ENST00000558471 C22orf15Q8WYQ4 148 aa10.27□□□□□ -0.77
LRRC28-206ENST00000558471 PCDHB16Q9NRJ7 776 aa10.27□□□□□ -0.77
LRRC28-206ENST00000558471 ZNF581Q9P0T4 197 aa10.27□□□□□ -0.77
LRRC28-206ENST00000558471 ZNF69Q9UC07 566 aa10.27□□□□□ -0.77
LRRC28-206ENST00000558471 AK6Q9Y3D8 172 aaKnown RBP10.27□□□□□ -0.77
LRRC28-206ENST00000558471 CUBNO60494 3623 aa10.26□□□□□ -0.77
LRRC28-206ENST00000558471 A0A087WXM4 84 aa10.26□□□□□ -0.77
LRRC28-206ENST00000558471 TRAV24A0A0B4J272 114 aa10.26□□□□□ -0.77
LRRC28-206ENST00000558471 CENPVL3A0A0U1RRI6 287 aa10.26□□□□□ -0.77
LRRC28-206ENST00000558471 MEX3AA1L020 520 aaKnown RBP10.26□□□□□ -0.77
LRRC28-206ENST00000558471 M0R1W7 72 aa10.26□□□□□ -0.77
LRRC28-206ENST00000558471 MGST3O14880 152 aa10.26□□□□□ -0.77
LRRC28-206ENST00000558471 GTF2F2P13984 249 aa10.26□□□□□ -0.77
LRRC28-206ENST00000558471 CCL3L1P16619 93 aa10.26□□□□□ -0.77
LRRC28-206ENST00000558471 GALP22466 123 aa10.26□□□□□ -0.77
LRRC28-206ENST00000558471 DLX1P56177 255 aa10.26□□□□□ -0.77
LRRC28-206ENST00000558471 RBM11P57052 281 aaKnown RBP10.26□□□□□ -0.77
LRRC28-206ENST00000558471 ERVFRD-1P60508 538 aa10.26□□□□□ -0.77
LRRC28-206ENST00000558471 PRB3Q04118 309 aaPredicted RBP10.26□□□□□ -0.77
LRRC28-206ENST00000558471 ZNF273Q14593 569 aa10.26□□□□□ -0.77
LRRC28-206ENST00000558471 NHLRC3Q5JS37 347 aa10.26□□□□□ -0.77
LRRC28-206ENST00000558471 METAP1DQ6UB28 335 aaPredicted RBP10.26□□□□□ -0.77
LRRC28-206ENST00000558471 C1orf122Q6ZSJ8 110 aa10.26□□□□□ -0.77
LRRC28-206ENST00000558471 CMTM4Q8IZR5 234 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms