RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 GABRR1P24046 479 aa6.96□□□□□ -1.3
TPM1-213ENST00000558400 ZNF93P35789 620 aaPredicted RBP6.96□□□□□ -1.3
TPM1-213ENST00000558400 VHLP40337 213 aa6.96□□□□□ -1.3
TPM1-213ENST00000558400 PTGFRP43088 359 aa6.96□□□□□ -1.3
TPM1-213ENST00000558400 EDDM3BP56851 147 aa6.96□□□□□ -1.3
TPM1-213ENST00000558400 ERVFRD-1P60508 538 aa6.96□□□□□ -1.3
TPM1-213ENST00000558400 ZP1P60852 638 aa6.96□□□□□ -1.3
TPM1-213ENST00000558400 UBA52P62987 128 aaKnown RBP6.96□□□□□ -1.3
TPM1-213ENST00000558400 RSU1Q15404 277 aa6.96□□□□□ -1.3
TPM1-213ENST00000558400 DEFB112Q30KQ8 113 aa6.96□□□□□ -1.3
TPM1-213ENST00000558400 MIDNQ504T8 468 aa6.96□□□□□ -1.3
TPM1-213ENST00000558400 RBM48Q5RL73 367 aaKnown RBP6.96□□□□□ -1.3
TPM1-213ENST00000558400 C16orf87Q6PH81 154 aa6.96□□□□□ -1.3
TPM1-213ENST00000558400 IZUMO2Q6UXV1 221 aa6.96□□□□□ -1.3
TPM1-213ENST00000558400 ASCL4Q6XD76 172 aa6.96□□□□□ -1.3
TPM1-213ENST00000558400 BRD3OSQ6XYD6 125 aa6.96□□□□□ -1.3
TPM1-213ENST00000558400 Q6YL49 198 aa6.96□□□□□ -1.3
TPM1-213ENST00000558400 Q8N7P7 452 aa6.96□□□□□ -1.3
TPM1-213ENST00000558400 Q8NFD4 153 aa6.96□□□□□ -1.3
TPM1-213ENST00000558400 OR4M1Q8NGD0 313 aa6.96□□□□□ -1.3
TPM1-213ENST00000558400 SSMEM1Q8WWF3 244 aa6.96□□□□□ -1.3
TPM1-213ENST00000558400 RGP1Q92546 391 aaPredicted RBP6.96□□□□□ -1.3
TPM1-213ENST00000558400 TNFRSF14Q92956 283 aa6.96□□□□□ -1.3
TPM1-213ENST00000558400 RFT1Q96AA3 541 aa6.96□□□□□ -1.3
TPM1-213ENST00000558400 PGLYRP3Q96LB9 341 aa6.96□□□□□ -1.3
TPM1-213ENST00000558400 SPACA5Q96QH8 159 aa6.96□□□□□ -1.3
TPM1-213ENST00000558400 METTL9Q9H1A3 318 aa6.96□□□□□ -1.3
TPM1-213ENST00000558400 DPAGT1Q9H3H5 408 aa6.96□□□□□ -1.3
TPM1-213ENST00000558400 EXOSC4Q9NPD3 245 aaKnown RBP6.96□□□□□ -1.3
TPM1-213ENST00000558400 ISYNA1Q9NPH2 558 aa6.96□□□□□ -1.3
TPM1-213ENST00000558400 C19orf12Q9NSK7 152 aa6.96□□□□□ -1.3
TPM1-213ENST00000558400 RBFOX1Q9NWB1 397 aaKnown RBP6.96□□□□□ -1.3
TPM1-213ENST00000558400 TAS2R4Q9NYW5 299 aa6.96□□□□□ -1.3
TPM1-213ENST00000558400 GSTK1Q9Y2Q3 226 aa6.96□□□□□ -1.3
TPM1-213ENST00000558400 POMT1Q9Y6A1 747 aa6.96□□□□□ -1.3
TPM1-213ENST00000558400 IGKV1-12A0A0C4DH73 117 aa6.95□□□□□ -1.3
TPM1-213ENST00000558400 TMEM82A0PJX8 343 aa6.95□□□□□ -1.3
TPM1-213ENST00000558400 TMEM89A2RUT3 159 aa6.95□□□□□ -1.3
TPM1-213ENST00000558400 C17orf98A8MV24 154 aa6.95□□□□□ -1.3
TPM1-213ENST00000558400 H3BUI4 141 aa6.95□□□□□ -1.3
TPM1-213ENST00000558400 NPFFO15130 113 aa6.95□□□□□ -1.3
TPM1-213ENST00000558400 MRPS14O60783 128 aaKnown RBP6.95□□□□□ -1.3
TPM1-213ENST00000558400 OR2H2O95918 312 aa6.95□□□□□ -1.3
TPM1-213ENST00000558400 IGKV1D-12P01611 117 aa6.95□□□□□ -1.3
TPM1-213ENST00000558400 CRYBA1P05813 215 aa6.95□□□□□ -1.3
TPM1-213ENST00000558400 CSN2P05814 226 aa6.95□□□□□ -1.3
TPM1-213ENST00000558400 RNASE1P07998 156 aaKnown RBP6.95□□□□□ -1.3
TPM1-213ENST00000558400 FBP1P09467 338 aa6.95□□□□□ -1.3
TPM1-213ENST00000558400 ZNF728P0DKX0 622 aa6.95□□□□□ -1.3
TPM1-213ENST00000558400 IGFBP3P17936 291 aaPredicted RBP6.95□□□□□ -1.3
TPM1-213ENST00000558400 FSTP19883 344 aa6.95□□□□□ -1.3
TPM1-213ENST00000558400 CRHBPP24387 322 aa6.95□□□□□ -1.3
TPM1-213ENST00000558400 DUSP1P28562 367 aa6.95□□□□□ -1.3
TPM1-213ENST00000558400 RANBP1P43487 201 aa6.95□□□□□ -1.3
TPM1-213ENST00000558400 CEBPDP49716 269 aaPredicted RBP6.95□□□□□ -1.3
TPM1-213ENST00000558400 COMPP49747 757 aaPredicted RBP6.95□□□□□ -1.3
TPM1-213ENST00000558400 LGALS4P56470 323 aa6.95□□□□□ -1.3
TPM1-213ENST00000558400 RPL15P61313 204 aaKnown RBP6.95□□□□□ -1.3
TPM1-213ENST00000558400 RPS11P62280 158 aaKnown RBP eCLIP6.95□□□□□ -1.3
TPM1-213ENST00000558400 ACTG1P63261 375 aa6.95□□□□□ -1.3
TPM1-213ENST00000558400 FOXL1Q12952 345 aa6.95□□□□□ -1.3
TPM1-213ENST00000558400 DOC2BQ14184 412 aa6.95□□□□□ -1.3
TPM1-213ENST00000558400 IL13RA2Q14627 380 aa6.95□□□□□ -1.3
TPM1-213ENST00000558400 MED22Q15528 200 aa6.95□□□□□ -1.3
TPM1-213ENST00000558400 TRAM1Q15629 374 aa6.95□□□□□ -1.3
TPM1-213ENST00000558400 GRK1Q15835 563 aa6.95□□□□□ -1.3
TPM1-213ENST00000558400 DDI2Q5TDH0 399 aa6.95□□□□□ -1.3
TPM1-213ENST00000558400 C17orf107Q6ZR85 190 aa6.95□□□□□ -1.3
TPM1-213ENST00000558400 PRSS48Q7RTY5 328 aa6.95□□□□□ -1.3
TPM1-213ENST00000558400 BATF2Q8N1L9 274 aa6.95□□□□□ -1.3
TPM1-213ENST00000558400 ZNF565Q8N9K5 539 aa6.95□□□□□ -1.3
TPM1-213ENST00000558400 OR52N4Q8NGI2 321 aa6.95□□□□□ -1.3
TPM1-213ENST00000558400 OR51A2Q8NGJ7 313 aa6.95□□□□□ -1.3
TPM1-213ENST00000558400 OR51T1Q8NGJ9 327 aa6.95□□□□□ -1.3
TPM1-213ENST00000558400 OR5D18Q8NGL1 313 aa6.95□□□□□ -1.3
TPM1-213ENST00000558400 TNFAIP8L1Q8WVP5 186 aa6.95□□□□□ -1.3
TPM1-213ENST00000558400 PHYHIPQ92561 330 aa6.95□□□□□ -1.3
TPM1-213ENST00000558400 FOXRED1Q96CU9 486 aaPredicted RBP6.95□□□□□ -1.3
TPM1-213ENST00000558400 MRPS24Q96EL2 167 aaKnown RBP6.95□□□□□ -1.3
TPM1-213ENST00000558400 ZNF48Q96MX3 618 aaPredicted RBP6.95□□□□□ -1.3
TPM1-213ENST00000558400 YTHDF1Q9BYJ9 559 aaKnown RBP6.95□□□□□ -1.3
TPM1-213ENST00000558400 BARHL1Q9BZE3 327 aa6.95□□□□□ -1.3
TPM1-213ENST00000558400 NCOR1P1Q9H4R4 102 aa6.95□□□□□ -1.3
TPM1-213ENST00000558400 ELL3Q9HB65 397 aaPredicted RBP6.95□□□□□ -1.3
TPM1-213ENST00000558400 SIRT7Q9NRC8 400 aa6.95□□□□□ -1.3
TPM1-213ENST00000558400 IL36GQ9NZH8 169 aa6.95□□□□□ -1.3
TPM1-213ENST00000558400 UBE2J1Q9Y385 318 aaPredicted RBP6.95□□□□□ -1.3
TPM1-213ENST00000558400 LINC00312Q9Y6C7 94 aa6.95□□□□□ -1.3
TPM1-213ENST00000558400 TRBV5-7A0A0A0MS05 114 aa6.94□□□□□ -1.3
TPM1-213ENST00000558400 A0A0G2JK05 382 aa6.94□□□□□ -1.3
TPM1-213ENST00000558400 BTBD17A6NE02 478 aa6.94□□□□□ -1.3
TPM1-213ENST00000558400 DNAJC9-AS1A6NH13 148 aa6.94□□□□□ -1.3
TPM1-213ENST00000558400 RNASEK-C17orf49H0YIS7 233 aa6.94□□□□□ -1.3
TPM1-213ENST00000558400 PSPNO60542 156 aa6.94□□□□□ -1.3
TPM1-213ENST00000558400 HTR3BO95264 441 aa6.94□□□□□ -1.3
TPM1-213ENST00000558400 PAHP00439 452 aa6.94□□□□□ -1.3
TPM1-213ENST00000558400 HKR1P10072 659 aa6.94□□□□□ -1.3
TPM1-213ENST00000558400 GTF2F2P13984 249 aa6.94□□□□□ -1.3
TPM1-213ENST00000558400 ZNF44P15621 663 aa6.94□□□□□ -1.3
TPM1-213ENST00000558400 PSMA1P25786 263 aaKnown RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms