RNA–Protein interactions for RNA: ENST00000558373.5

CTDSPL2-202, Transcript of CTD small phosphatase like 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSPL2, Length 4,255 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-202ENST00000558373 ARL5BQ96KC2 179 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 HDHD3Q9BSH5 251 aaPredicted RBP0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 MAP1LC3CQ9BXW4 147 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 FBXO6Q9NRD1 293 aaPredicted RBP0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 AGPAT3Q9NRZ7 376 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 PTTG3PQ9NZH4 202 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 COL1A1P02452 1464 aaPredicted RBP0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 ATRXP46100 2492 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 TONSLQ96HA7 1378 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 ANKRD30AQ9BXX3 1397 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 FER1L6Q2WGJ9 1857 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 VPS13AQ96RL7 3174 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 IGLV3-22A0A075B6J6 115 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 IGHV1-69DA0A0B4J2H0 117 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 A0A1B0GV50 99 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 A6NDX4 124 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 NME4O00746 187 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 RGS5O15539 181 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 PCCAP05165 728 aaPredicted RBP0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 HIST1H1CP16403 213 aaKnown RBP0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 FUT3P21217 361 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 CTRLP40313 264 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 XKP51811 444 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 ZNF133P52736 654 aaPredicted RBP0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 HCCSP53701 268 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 SKP1P63208 163 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 UBE2IP63279 158 aaKnown RBP0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 EBPQ15125 230 aaKnown RBP0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 MRPL23Q16540 153 aaKnown RBP0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 RGS21Q2M5E4 152 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 C2orf83Q53S99 150 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 ACP7Q6ZNF0 438 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 Q6ZR03 302 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 FAM92BQ6ZTR7 304 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 LINC00336Q6ZUF6 198 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 Q8N9W7 124 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 OR8G5Q8NG78 346 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 OR51F2Q8NH61 342 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 TCP10LQ8TDR4 215 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 RORBQ92753 470 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 TMIGD2Q96BF3 282 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 NXF2Q9GZY0 626 aaKnown RBP0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 OR51B6Q9H340 312 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 FBXO44Q9H4M3 255 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 TAC3Q9UHF0 121 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 TRAPPC4Q9Y296 219 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 NYNRINQ9P2P1 1898 aaKnown RBP0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 C9orf84Q5VXU9 1444 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 UHRF1BP1Q6BDS2 1440 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 CDK12Q9NYV4 1490 aaPredicted RBP0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 IGKV1D-13A0A0B4J2D9 117 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 KRBOX1C9JBD0 128 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 SLC16A4O15374 487 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 SHOX2O60902 331 aaPredicted RBP0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 NPIPB7O75200 414 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 GCM2O75603 506 aaPredicted RBP0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 NPPAP01160 153 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 HLA-AP01891 365 aaKnown RBP0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 CD74P04233 296 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 GNAO1P09471 354 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 IGKV1-13P0DP09 117 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 SLC2A1P11166 492 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 MYL12AP19105 171 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 ELK1P19419 428 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 CNR1P21554 472 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 CFL1P23528 166 aaKnown RBP0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 DDTP30046 118 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 RAP1GDS1P52306 607 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 ATP5G2Q06055 141 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 LOXL1Q08397 574 aaPredicted RBP0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 RGNQ15493 299 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 ZNF726P1Q15940 193 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 UAP1Q16222 522 aaPredicted RBP0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 BATFQ16520 125 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 AKIRIN2Q53H80 203 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 OGFRL1Q5TC84 451 aaPredicted RBP0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 FAM104BQ5XKR9 115 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 FAM231DQ6ZW35 169 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 COPS6Q7L5N1 327 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 ORMDL3Q8N138 153 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 C20orf203Q8NBC4 194 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 TTLQ8NG68 377 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 OR52E4Q8NGH9 312 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 CCDC127Q96BQ5 260 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 STARD4Q96DR4 205 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 YPEL4Q96NS1 127 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 SPZ1Q9BXG8 430 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 KRTAP4-3Q9BYR4 195 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 EIF5A2Q9GZV4 153 aaKnown RBP0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 DRC3Q9H069 523 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 VCXQ9H320 206 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 AHSPQ9NZD4 102 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 IL17CQ9P0M4 197 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 NYAP2Q9P242 653 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 NDRG2Q9UN36 371 aaKnown RBP0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 SNX10Q9Y5X0 201 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 ZNF609O15014 1411 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 WDR7Q9Y4E6 1490 aa0.93□□□□□ -2.26
CTDSPL2-202ENST00000558373 CACNA1SQ13698 1873 aa0.92□□□□□ -2.26
CTDSPL2-202ENST00000558373 IGKV2D-24A0A075B6R9 120 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms