RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 C12orf73Q69YU5 71 aa12.4□□□□□ -0.42
SPG11-210ENST00000558319 NUFIP2Q7Z417 695 aaKnown RBP12.4□□□□□ -0.42
SPG11-210ENST00000558319 TMEM204Q9BSN7 226 aa12.4□□□□□ -0.42
SPG11-210ENST00000558319 MTFP1Q9UDX5 166 aa12.4□□□□□ -0.42
SPG11-210ENST00000558319 NINQ8N4C6 2090 aa12.4□□□□□ -0.42
SPG11-210ENST00000558319 IGLV3-10A0A075B6K4 115 aa12.4□□□□□ -0.42
SPG11-210ENST00000558319 TMPRSS2O15393 492 aa12.4□□□□□ -0.42
SPG11-210ENST00000558319 FUT7Q11130 342 aa12.4□□□□□ -0.42
SPG11-210ENST00000558319 LILRB1Q8NHL6 650 aaPredicted RBP12.4□□□□□ -0.42
SPG11-210ENST00000558319 EDARADDQ8WWZ3 215 aa12.4□□□□□ -0.42
SPG11-210ENST00000558319 ABHD1Q96SE0 405 aa12.4□□□□□ -0.42
SPG11-210ENST00000558319 MFNGO00587 321 aa12.4□□□□□ -0.42
SPG11-210ENST00000558319 CD99P14209 185 aa12.4□□□□□ -0.42
SPG11-210ENST00000558319 KISS1Q15726 138 aa12.4□□□□□ -0.42
SPG11-210ENST00000558319 LGALSLQ3ZCW2 172 aaPredicted RBP12.4□□□□□ -0.42
SPG11-210ENST00000558319 OR10G8Q8NGN5 311 aa12.4□□□□□ -0.42
SPG11-210ENST00000558319 OTOSQ8NHW6 89 aa12.4□□□□□ -0.42
SPG11-210ENST00000558319 SPACA9Q96E40 222 aaPredicted RBP12.4□□□□□ -0.42
SPG11-210ENST00000558319 TEX101Q9BY14 249 aa12.4□□□□□ -0.42
SPG11-210ENST00000558319 THBS4P35443 961 aa12.4□□□□□ -0.42
SPG11-210ENST00000558319 RNF165Q6ZSG1 346 aa12.4□□□□□ -0.42
SPG11-210ENST00000558319 C9orf62Q8N4C0 152 aa12.4□□□□□ -0.42
SPG11-210ENST00000558319 EIF4E3Q8N5X7 224 aaKnown RBP12.4□□□□□ -0.42
SPG11-210ENST00000558319 SLC45A2Q9UMX9 530 aa12.4□□□□□ -0.42
SPG11-210ENST00000558319 PRRC2BQ5JSZ5 2229 aaKnown RBP12.39□□□□□ -0.43
SPG11-210ENST00000558319 ZNF98A6NK75 572 aa12.39□□□□□ -0.43
SPG11-210ENST00000558319 TARM1B6A8C7 271 aa12.39□□□□□ -0.43
SPG11-210ENST00000558319 C11orf94C9JXX5 98 aa12.39□□□□□ -0.43
SPG11-210ENST00000558319 PPICP45877 212 aa12.39□□□□□ -0.43
SPG11-210ENST00000558319 PCP4P48539 62 aa12.39□□□□□ -0.43
SPG11-210ENST00000558319 MARVELD1Q9BSK0 173 aa12.39□□□□□ -0.43
SPG11-210ENST00000558319 NAA60Q9H7X0 242 aa12.39□□□□□ -0.43
SPG11-210ENST00000558319 SBK3P0C264 359 aa12.39□□□□□ -0.43
SPG11-210ENST00000558319 FUT3P21217 361 aa12.39□□□□□ -0.43
SPG11-210ENST00000558319 RTL10Q7L3V2 364 aa12.39□□□□□ -0.43
SPG11-210ENST00000558319 OR6C3Q9NZP0 311 aa12.39□□□□□ -0.43
SPG11-210ENST00000558319 ATG2BQ96BY7 2078 aa12.39□□□□□ -0.43
SPG11-210ENST00000558319 TRAV39A0A0B4J263 110 aa12.39□□□□□ -0.43
SPG11-210ENST00000558319 PATE3B3GLJ2 98 aa12.39□□□□□ -0.43
SPG11-210ENST00000558319 DIRC3C9JPN6 131 aa12.39□□□□□ -0.43
SPG11-210ENST00000558319 OR3A1P47881 315 aa12.39□□□□□ -0.43
SPG11-210ENST00000558319 FZD2Q14332 565 aa12.39□□□□□ -0.43
SPG11-210ENST00000558319 TMEM92Q6UXU6 159 aa12.39□□□□□ -0.43
SPG11-210ENST00000558319 ZNF426Q9BUY5 554 aa12.39□□□□□ -0.43
SPG11-210ENST00000558319 OCIAD1Q9NX40 245 aa12.39□□□□□ -0.43
SPG11-210ENST00000558319 IGKV3D-15A0A087WSY6 115 aa12.39□□□□□ -0.43
SPG11-210ENST00000558319 TMEM30CPA0ZSE6 113 aa12.39□□□□□ -0.43
SPG11-210ENST00000558319 SNURFLB1AK76 121 aa12.39□□□□□ -0.43
SPG11-210ENST00000558319 IGKV3-15P01624 115 aa12.39□□□□□ -0.43
SPG11-210ENST00000558319 PGA3P0DJD8 388 aa12.39□□□□□ -0.43
SPG11-210ENST00000558319 WNT3P56703 355 aa12.39□□□□□ -0.43
SPG11-210ENST00000558319 TNXAQ16473 311 aa12.39□□□□□ -0.43
SPG11-210ENST00000558319 CNRIP1Q96F85 164 aaPredicted RBP12.39□□□□□ -0.43
SPG11-210ENST00000558319 RAB40CQ96S21 281 aa12.39□□□□□ -0.43
SPG11-210ENST00000558319 SLC7A10Q9NS82 523 aa12.39□□□□□ -0.43
SPG11-210ENST00000558319 ASPDHA6ND91 283 aa12.38□□□□□ -0.43
SPG11-210ENST00000558319 H3BQ15 152 aa12.38□□□□□ -0.43
SPG11-210ENST00000558319 TFPI2P48307 235 aa12.38□□□□□ -0.43
SPG11-210ENST00000558319 HFEQ30201 348 aa12.38□□□□□ -0.43
SPG11-210ENST00000558319 RAB37Q96AX2 223 aa12.38□□□□□ -0.43
SPG11-210ENST00000558319 ANAPC16Q96DE5 110 aa12.38□□□□□ -0.43
SPG11-210ENST00000558319 HSPB2A8KAH6 182 aa12.38□□□□□ -0.43
SPG11-210ENST00000558319 CA2P00918 260 aa12.38□□□□□ -0.43
SPG11-210ENST00000558319 MGPP08493 103 aa12.38□□□□□ -0.43
SPG11-210ENST00000558319 PLP1P60201 277 aa12.38□□□□□ -0.43
SPG11-210ENST00000558319 HSPB2Q16082 182 aa12.38□□□□□ -0.43
SPG11-210ENST00000558319 ZNF385CQ66K41 422 aaPredicted RBP12.38□□□□□ -0.43
SPG11-210ENST00000558319 CNTD2Q9H8S5 307 aa12.38□□□□□ -0.43
SPG11-210ENST00000558319 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.38□□□□□ -0.43
SPG11-210ENST00000558319 CXorf65A6NEN9 183 aa12.38□□□□□ -0.43
SPG11-210ENST00000558319 FXYD1O00168 92 aa12.38□□□□□ -0.43
SPG11-210ENST00000558319 COL9A1P20849 921 aa12.38□□□□□ -0.43
SPG11-210ENST00000558319 DSCR4P56555 118 aaPredicted RBP12.38□□□□□ -0.43
SPG11-210ENST00000558319 TNFAIP6P98066 277 aaPredicted RBP12.38□□□□□ -0.43
SPG11-210ENST00000558319 MICBQ29980 383 aa12.38□□□□□ -0.43
SPG11-210ENST00000558319 SMIM21Q3B7S5 101 aa12.38□□□□□ -0.43
SPG11-210ENST00000558319 LRRC75AQ8NAA5 344 aa12.38□□□□□ -0.43
SPG11-210ENST00000558319 C17orf47Q8NEP4 570 aa12.38□□□□□ -0.43
SPG11-210ENST00000558319 PTPMT1Q8WUK0 201 aaPredicted RBP12.38□□□□□ -0.43
SPG11-210ENST00000558319 LRRC29Q8WV35 223 aa12.38□□□□□ -0.43
SPG11-210ENST00000558319 PPIL1Q9Y3C6 166 aa12.38□□□□□ -0.43
SPG11-210ENST00000558319 SPAARA0A1B0GVQ0 90 aa12.38□□□□□ -0.43
SPG11-210ENST00000558319 A0A1W2PPE3 182 aa12.38□□□□□ -0.43
SPG11-210ENST00000558319 ANKRD20A5PA0PJZ0 165 aa12.38□□□□□ -0.43
SPG11-210ENST00000558319 APCSP02743 223 aa12.38□□□□□ -0.43
SPG11-210ENST00000558319 AREGP15514 252 aa12.38□□□□□ -0.43
SPG11-210ENST00000558319 NAAAQ02083 359 aa12.38□□□□□ -0.43
SPG11-210ENST00000558319 TRIP6Q15654 476 aaKnown RBP12.38□□□□□ -0.43
SPG11-210ENST00000558319 SLX4Q8IY92 1834 aa12.38□□□□□ -0.43
SPG11-210ENST00000558319 IGHV3OR16-12A0A075B7B8 117 aa12.38□□□□□ -0.43
SPG11-210ENST00000558319 FRG2CA6NGY1 282 aa12.38□□□□□ -0.43
SPG11-210ENST00000558319 HMSDA8MTL9 139 aa12.38□□□□□ -0.43
SPG11-210ENST00000558319 IL13RA2Q14627 380 aa12.38□□□□□ -0.43
SPG11-210ENST00000558319 CRISPLD2Q9H0B8 497 aa12.38□□□□□ -0.43
SPG11-210ENST00000558319 H0YIG0 161 aa12.37□□□□□ -0.43
SPG11-210ENST00000558319 HAX1O00165 279 aa12.37□□□□□ -0.43
SPG11-210ENST00000558319 ZFPL1O95159 310 aa12.37□□□□□ -0.43
SPG11-210ENST00000558319 MT-CO3P00414 261 aa12.37□□□□□ -0.43
SPG11-210ENST00000558319 NGFP01138 241 aa12.37□□□□□ -0.43
SPG11-210ENST00000558319 ZNF117Q03924 483 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms