RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 ADAT3Q96EY9 351 aaPredicted RBP10.96□□□□□ -0.65
SNRPA1-204ENST00000558020 OPALINQ96PE5 141 aa10.96□□□□□ -0.65
SNRPA1-204ENST00000558020 HMG20AQ9NP66 347 aa10.96□□□□□ -0.65
SNRPA1-204ENST00000558020 EXOSC4Q9NPD3 245 aaKnown RBP10.96□□□□□ -0.65
SNRPA1-204ENST00000558020 RBFOX1Q9NWB1 397 aaKnown RBP10.96□□□□□ -0.65
SNRPA1-204ENST00000558020 FRRS1LQ9P0K9 344 aa10.96□□□□□ -0.65
SNRPA1-204ENST00000558020 DPM3Q9P2X0 92 aa10.96□□□□□ -0.65
SNRPA1-204ENST00000558020 HHLA2Q9UM44 414 aa10.96□□□□□ -0.65
SNRPA1-204ENST00000558020 LEUTXA8MZ59 168 aa10.95□□□□□ -0.66
SNRPA1-204ENST00000558020 TOR1AO14656 332 aa10.95□□□□□ -0.66
SNRPA1-204ENST00000558020 SLC16A6O15403 523 aa10.95□□□□□ -0.66
SNRPA1-204ENST00000558020 PSPNO60542 156 aa10.95□□□□□ -0.66
SNRPA1-204ENST00000558020 ENTPD6O75354 484 aa10.95□□□□□ -0.66
SNRPA1-204ENST00000558020 HTR1AP08908 422 aa10.95□□□□□ -0.66
SNRPA1-204ENST00000558020 CD28P10747 220 aa10.95□□□□□ -0.66
SNRPA1-204ENST00000558020 BCL3P20749 454 aa10.95□□□□□ -0.66
SNRPA1-204ENST00000558020 KIR3DL2P43630 455 aa10.95□□□□□ -0.66
SNRPA1-204ENST00000558020 PRRX1P54821 245 aa10.95□□□□□ -0.66
SNRPA1-204ENST00000558020 BLCAPP62952 87 aa10.95□□□□□ -0.66
SNRPA1-204ENST00000558020 ZNF85Q03923 595 aa10.95□□□□□ -0.66
SNRPA1-204ENST00000558020 SLC25A30Q5SVS4 291 aa10.95□□□□□ -0.66
SNRPA1-204ENST00000558020 SAMD5Q5TGI4 173 aa10.95□□□□□ -0.66
SNRPA1-204ENST00000558020 CENPVQ7Z7K6 275 aaPredicted RBP10.95□□□□□ -0.66
SNRPA1-204ENST00000558020 LYG1Q8N1E2 194 aa10.95□□□□□ -0.66
SNRPA1-204ENST00000558020 ACBD7Q8N6N7 88 aa10.95□□□□□ -0.66
SNRPA1-204ENST00000558020 TPRX1Q8N7U7 411 aa10.95□□□□□ -0.66
SNRPA1-204ENST00000558020 CHST4Q8NCG5 386 aa10.95□□□□□ -0.66
SNRPA1-204ENST00000558020 OR13C3Q8NGS6 347 aa10.95□□□□□ -0.66
SNRPA1-204ENST00000558020 SGCDQ92629 289 aa10.95□□□□□ -0.66
SNRPA1-204ENST00000558020 OR5M11Q96RB7 305 aa10.95□□□□□ -0.66
SNRPA1-204ENST00000558020 WNT10AQ9GZT5 417 aa10.95□□□□□ -0.66
SNRPA1-204ENST00000558020 TAS2R3Q9NYW6 316 aa10.95□□□□□ -0.66
SNRPA1-204ENST00000558020 GSTK1Q9Y2Q3 226 aa10.95□□□□□ -0.66
SNRPA1-204ENST00000558020 IGKV1-9A0A0C4DH69 117 aa10.94□□□□□ -0.66
SNRPA1-204ENST00000558020 SAC3D1A6NKF1 404 aa10.94□□□□□ -0.66
SNRPA1-204ENST00000558020 FAM90A22PA8MWA6 464 aa10.94□□□□□ -0.66
SNRPA1-204ENST00000558020 SIRPB1O00241 398 aa10.94□□□□□ -0.66
SNRPA1-204ENST00000558020 MT-ND2P03891 347 aa10.94□□□□□ -0.66
SNRPA1-204ENST00000558020 LMO1P25800 156 aa10.94□□□□□ -0.66
SNRPA1-204ENST00000558020 SNU13P55769 128 aaKnown RBP10.94□□□□□ -0.66
SNRPA1-204ENST00000558020 SNRPGP62308 76 aaKnown RBP10.94□□□□□ -0.66
SNRPA1-204ENST00000558020 BDH1Q02338 343 aa10.94□□□□□ -0.66
SNRPA1-204ENST00000558020 SCN1BQ07699 218 aa10.94□□□□□ -0.66
SNRPA1-204ENST00000558020 LDLRAD2Q5SZI1 272 aa10.94□□□□□ -0.66
SNRPA1-204ENST00000558020 HEPN1Q6WQI6 88 aa10.94□□□□□ -0.66
SNRPA1-204ENST00000558020 C10orf67Q8IYJ2 551 aa10.94□□□□□ -0.66
SNRPA1-204ENST00000558020 SAXO1Q8IYX7 474 aa10.94□□□□□ -0.66
SNRPA1-204ENST00000558020 OR5AU1Q8NGC0 362 aa10.94□□□□□ -0.66
SNRPA1-204ENST00000558020 OR4D6Q8NGJ1 314 aa10.94□□□□□ -0.66
SNRPA1-204ENST00000558020 OR5D14Q8NGL3 314 aa10.94□□□□□ -0.66
SNRPA1-204ENST00000558020 CORO2AQ92828 525 aa10.94□□□□□ -0.66
SNRPA1-204ENST00000558020 RNFT2Q96EX2 444 aa10.94□□□□□ -0.66
SNRPA1-204ENST00000558020 HRASLS5Q96KN8 279 aa10.94□□□□□ -0.66
SNRPA1-204ENST00000558020 MBOAT4Q96T53 435 aa10.94□□□□□ -0.66
SNRPA1-204ENST00000558020 CITED2Q99967 270 aaPredicted RBP10.94□□□□□ -0.66
SNRPA1-204ENST00000558020 LIN7BQ9HAP6 207 aa10.94□□□□□ -0.66
SNRPA1-204ENST00000558020 PLXNB1O43157 2135 aa10.94□□□□□ -0.66
SNRPA1-204ENST00000558020 DSCAML1Q8TD84 2053 aa10.94□□□□□ -0.66
SNRPA1-204ENST00000558020 J3QLW9 94 aa10.93□□□□□ -0.66
SNRPA1-204ENST00000558020 DEGS1O15121 323 aa10.93□□□□□ -0.66
SNRPA1-204ENST00000558020 OR2H2O95918 312 aa10.93□□□□□ -0.66
SNRPA1-204ENST00000558020 CALCBP10092 127 aa10.93□□□□□ -0.66
SNRPA1-204ENST00000558020 ZNF44P15621 663 aa10.93□□□□□ -0.66
SNRPA1-204ENST00000558020 ZNF19P17023 458 aa10.93□□□□□ -0.66
SNRPA1-204ENST00000558020 CDK2P24941 298 aa10.93□□□□□ -0.66
SNRPA1-204ENST00000558020 OR3A1P47881 315 aa10.93□□□□□ -0.66
SNRPA1-204ENST00000558020 CCDC144NLQ6NUI1 221 aa10.93□□□□□ -0.66
SNRPA1-204ENST00000558020 TCF23Q7RTU1 214 aa10.93□□□□□ -0.66
SNRPA1-204ENST00000558020 SERPINA12Q8IW75 414 aa10.93□□□□□ -0.66
SNRPA1-204ENST00000558020 ZNF565Q8N9K5 539 aa10.93□□□□□ -0.66
SNRPA1-204ENST00000558020 CPNE2Q96FN4 548 aaPredicted RBP10.93□□□□□ -0.66
SNRPA1-204ENST00000558020 Q96MT0 163 aa10.93□□□□□ -0.66
SNRPA1-204ENST00000558020 MMP28Q9H239 520 aa10.93□□□□□ -0.66
SNRPA1-204ENST00000558020 ZCCHC4Q9H5U6 513 aa10.93□□□□□ -0.66
SNRPA1-204ENST00000558020 FAM53CQ9NYF3 392 aa10.93□□□□□ -0.66
SNRPA1-204ENST00000558020 IL36RNQ9UBH0 155 aa10.93□□□□□ -0.66
SNRPA1-204ENST00000558020 M0QZK8 103 aa10.92□□□□□ -0.66
SNRPA1-204ENST00000558020 PIN1P1O15428 100 aa10.92□□□□□ -0.66
SNRPA1-204ENST00000558020 KDM4BO94953 1096 aa10.92□□□□□ -0.66
SNRPA1-204ENST00000558020 ALPLP05186 524 aa10.92□□□□□ -0.66
SNRPA1-204ENST00000558020 CSN2P05814 226 aa10.92□□□□□ -0.66
SNRPA1-204ENST00000558020 TMEM225BP0DP42 221 aa10.92□□□□□ -0.66
SNRPA1-204ENST00000558020 DBTP11182 482 aaKnown RBP10.92□□□□□ -0.66
SNRPA1-204ENST00000558020 MNDAP41218 407 aa10.92□□□□□ -0.66
SNRPA1-204ENST00000558020 PTGFRP43088 359 aa10.92□□□□□ -0.66
SNRPA1-204ENST00000558020 AESQ08117 197 aa10.92□□□□□ -0.66
SNRPA1-204ENST00000558020 MRPL28Q13084 256 aaKnown RBP10.92□□□□□ -0.66
SNRPA1-204ENST00000558020 OXLD1Q5BKU9 147 aa10.92□□□□□ -0.66
SNRPA1-204ENST00000558020 KRBOX4Q5JUW0 171 aa10.92□□□□□ -0.66
SNRPA1-204ENST00000558020 HIST2H2BDQ6DRA6 164 aa10.92□□□□□ -0.66
SNRPA1-204ENST00000558020 OR4P4Q8NGL7 312 aa10.92□□□□□ -0.66
SNRPA1-204ENST00000558020 WIPF2Q8TF74 440 aaPredicted RBP10.92□□□□□ -0.66
SNRPA1-204ENST00000558020 RFT1Q96AA3 541 aa10.92□□□□□ -0.66
SNRPA1-204ENST00000558020 COMMD4Q9H0A8 199 aa10.92□□□□□ -0.66
SNRPA1-204ENST00000558020 NECAP2Q9NVZ3 263 aa10.92□□□□□ -0.66
SNRPA1-204ENST00000558020 OR6C3Q9NZP0 311 aa10.92□□□□□ -0.66
SNRPA1-204ENST00000558020 ODAMA1E959 279 aa10.91□□□□□ -0.66
SNRPA1-204ENST00000558020 OOSP1A8MZH6 123 aa10.91□□□□□ -0.66
SNRPA1-204ENST00000558020 J3QRE1 110 aa10.91□□□□□ -0.66
SNRPA1-204ENST00000558020 MAGEB3O15480 346 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms