RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 NIPBLQ6KC79 2804 aaeCLIP21.13■□□□□ 0.97
SMAD6-202ENST00000557916 TMEM82A0PJX8 343 aa21.12■□□□□ 0.97
SMAD6-202ENST00000557916 SIRPB1O00241 398 aa21.12■□□□□ 0.97
SMAD6-202ENST00000557916 OR2H2O95918 312 aa21.12■□□□□ 0.97
SMAD6-202ENST00000557916 AVPP01185 164 aa21.12■□□□□ 0.97
SMAD6-202ENST00000557916 LIPFP07098 398 aa21.12■□□□□ 0.97
SMAD6-202ENST00000557916 SMIM18P0DKX4 95 aa21.12■□□□□ 0.97
SMAD6-202ENST00000557916 GABRR1P24046 479 aa21.12■□□□□ 0.97
SMAD6-202ENST00000557916 MYL9P24844 172 aa21.12■□□□□ 0.97
SMAD6-202ENST00000557916 IL17RELQ6ZVW7 336 aa21.12■□□□□ 0.97
SMAD6-202ENST00000557916 MRI1Q9BV20 369 aa21.12■□□□□ 0.97
SMAD6-202ENST00000557916 LPAR3Q9UBY5 353 aa21.12■□□□□ 0.97
SMAD6-202ENST00000557916 AUP1Q9Y679 476 aa21.12■□□□□ 0.97
SMAD6-202ENST00000557916 A0A1W2PP11 408 aa21.12■□□□□ 0.97
SMAD6-202ENST00000557916 DEGS1O15121 323 aa21.12■□□□□ 0.97
SMAD6-202ENST00000557916 CRLF1O75462 422 aa21.12■□□□□ 0.97
SMAD6-202ENST00000557916 GTF2F2P13984 249 aa21.12■□□□□ 0.97
SMAD6-202ENST00000557916 ZNF44P15621 663 aa21.12■□□□□ 0.97
SMAD6-202ENST00000557916 GADD45AP24522 165 aa21.12■□□□□ 0.97
SMAD6-202ENST00000557916 HTR2CP28335 458 aa21.12■□□□□ 0.97
SMAD6-202ENST00000557916 IL13RA2Q14627 380 aa21.12■□□□□ 0.97
SMAD6-202ENST00000557916 PDCD1Q15116 288 aa21.12■□□□□ 0.97
SMAD6-202ENST00000557916 PIGYQ3MUY2 71 aa21.12■□□□□ 0.97
SMAD6-202ENST00000557916 Q6P435 159 aa21.12■□□□□ 0.97
SMAD6-202ENST00000557916 C17orf107Q6ZR85 190 aa21.12■□□□□ 0.97
SMAD6-202ENST00000557916 LY6G5BQ8NDX9 201 aa21.12■□□□□ 0.97
SMAD6-202ENST00000557916 C1orf147Q96MC9 270 aaPredicted RBP21.12■□□□□ 0.97
SMAD6-202ENST00000557916 CHCHD6Q9BRQ6 235 aa21.12■□□□□ 0.97
SMAD6-202ENST00000557916 OPN4Q9UHM6 478 aa21.12■□□□□ 0.97
SMAD6-202ENST00000557916 ST3GAL6Q9Y274 331 aa21.12■□□□□ 0.97
SMAD6-202ENST00000557916 SVEP1Q4LDE5 3571 aa21.12■□□□□ 0.97
SMAD6-202ENST00000557916 SHISA3A0PJX4 238 aa21.11■□□□□ 0.97
SMAD6-202ENST00000557916 PDCD5O14737 125 aa21.11■□□□□ 0.97
SMAD6-202ENST00000557916 PPIAL4GP0DN37 164 aa21.11■□□□□ 0.97
SMAD6-202ENST00000557916 LMO1P25800 156 aa21.11■□□□□ 0.97
SMAD6-202ENST00000557916 PSMD7P51665 324 aa21.11■□□□□ 0.97
SMAD6-202ENST00000557916 CHRFAM7AQ494W8 412 aa21.11■□□□□ 0.97
SMAD6-202ENST00000557916 C1orf229Q6ZS94 237 aaPredicted RBP21.11■□□□□ 0.97
SMAD6-202ENST00000557916 OR5D13Q8NGL4 314 aa21.11■□□□□ 0.97
SMAD6-202ENST00000557916 OR6M1Q8NGM8 313 aa21.11■□□□□ 0.97
SMAD6-202ENST00000557916 PLGRKTQ9HBL7 147 aa21.11■□□□□ 0.97
SMAD6-202ENST00000557916 GHRLQ9UBU3 117 aa21.11■□□□□ 0.97
SMAD6-202ENST00000557916 TRBV23-1A0A0A0MS06 115 aa21.1■□□□□ 0.97
SMAD6-202ENST00000557916 LOC100506127A0A0U1RQW1 187 aa21.1■□□□□ 0.97
SMAD6-202ENST00000557916 SLC22A1O15245 554 aa21.1■□□□□ 0.97
SMAD6-202ENST00000557916 PSPNO60542 156 aa21.1■□□□□ 0.97
SMAD6-202ENST00000557916 UBBP0CG47 229 aa21.1■□□□□ 0.97
SMAD6-202ENST00000557916 NHLRC3Q5JS37 347 aa21.1■□□□□ 0.97
SMAD6-202ENST00000557916 OR8H2Q8N162 312 aa21.1■□□□□ 0.97
SMAD6-202ENST00000557916 CHST4Q8NCG5 386 aa21.1■□□□□ 0.97
SMAD6-202ENST00000557916 C8orf46Q8TAG6 207 aa21.1■□□□□ 0.97
SMAD6-202ENST00000557916 PPP1R35Q8TAP8 253 aa21.1■□□□□ 0.97
SMAD6-202ENST00000557916 CHST6Q9GZX3 395 aa21.1■□□□□ 0.97
SMAD6-202ENST00000557916 V9GY05 133 aa21.1■□□□□ 0.97
SMAD6-202ENST00000557916 A0A0G2JK05 382 aa21.09■□□□□ 0.97
SMAD6-202ENST00000557916 CRTAPO75718 401 aaPredicted RBP21.09■□□□□ 0.97
SMAD6-202ENST00000557916 RBM11P57052 281 aaKnown RBP21.09■□□□□ 0.97
SMAD6-202ENST00000557916 GRK1Q15835 563 aa21.09■□□□□ 0.97
SMAD6-202ENST00000557916 GDPD3Q7L5L3 318 aa21.09■□□□□ 0.97
SMAD6-202ENST00000557916 OR4S1Q8NGB4 309 aa21.09■□□□□ 0.97
SMAD6-202ENST00000557916 YIPF6Q96EC8 236 aa21.09■□□□□ 0.97
SMAD6-202ENST00000557916 MRPS24Q96EL2 167 aaKnown RBP21.09■□□□□ 0.97
SMAD6-202ENST00000557916 DMRTB1Q96MA1 342 aa21.09■□□□□ 0.97
SMAD6-202ENST00000557916 MRPS26Q9BYN8 205 aaKnown RBP21.09■□□□□ 0.97
SMAD6-202ENST00000557916 SETD2Q9BYW2 2564 aaPredicted RBP21.09■□□□□ 0.97
SMAD6-202ENST00000557916 A0A1W2PQ09 198 aa21.08■□□□□ 0.97
SMAD6-202ENST00000557916 SLC33A1O00400 549 aaPredicted RBP21.08■□□□□ 0.97
SMAD6-202ENST00000557916 SLC17A2O00624 439 aa21.08■□□□□ 0.97
SMAD6-202ENST00000557916 OR3A1P47881 315 aa21.08■□□□□ 0.97
SMAD6-202ENST00000557916 ARF6P62330 175 aa21.08■□□□□ 0.97
SMAD6-202ENST00000557916 RPL31P62899 125 aaKnown RBP21.08■□□□□ 0.97
SMAD6-202ENST00000557916 FAM185AQ8N0U4 392 aa21.08■□□□□ 0.97
SMAD6-202ENST00000557916 TEX29Q8N6K0 151 aa21.08■□□□□ 0.97
SMAD6-202ENST00000557916 TMEM104Q8NE00 496 aa21.08■□□□□ 0.97
SMAD6-202ENST00000557916 OR4M1Q8NGD0 313 aa21.08■□□□□ 0.97
SMAD6-202ENST00000557916 SLC25A28Q96A46 364 aa21.08■□□□□ 0.97
SMAD6-202ENST00000557916 BANF2Q9H503 90 aa21.08■□□□□ 0.97
SMAD6-202ENST00000557916 C19orf12Q9NSK7 152 aa21.08■□□□□ 0.97
SMAD6-202ENST00000557916 GEMIN2O14893 280 aaKnown RBP21.07■□□□□ 0.96
SMAD6-202ENST00000557916 MGMTP16455 207 aa21.07■□□□□ 0.96
SMAD6-202ENST00000557916 RAB3BP20337 219 aa21.07■□□□□ 0.96
SMAD6-202ENST00000557916 SRP14P37108 136 aaKnown RBP21.07■□□□□ 0.96
SMAD6-202ENST00000557916 EDDM3BP56851 147 aa21.07■□□□□ 0.96
SMAD6-202ENST00000557916 RAB11BQ15907 218 aa21.07■□□□□ 0.96
SMAD6-202ENST00000557916 TIMM50Q3ZCQ8 353 aa21.07■□□□□ 0.96
SMAD6-202ENST00000557916 LINC00596Q86U02 117 aa21.07■□□□□ 0.96
SMAD6-202ENST00000557916 KCTD7Q96MP8 289 aa21.07■□□□□ 0.96
SMAD6-202ENST00000557916 CST11Q9H112 138 aa21.07■□□□□ 0.96
SMAD6-202ENST00000557916 ONECUT1Q9UBC0 465 aa21.07■□□□□ 0.96
SMAD6-202ENST00000557916 MGST3O14880 152 aa21.06■□□□□ 0.96
SMAD6-202ENST00000557916 OR10A3P58181 314 aa21.06■□□□□ 0.96
SMAD6-202ENST00000557916 EDDM3AQ14507 147 aa21.06■□□□□ 0.96
SMAD6-202ENST00000557916 P2RY14Q15391 338 aa21.06■□□□□ 0.96
SMAD6-202ENST00000557916 GDPGP1Q6ZNW5 385 aa21.06■□□□□ 0.96
SMAD6-202ENST00000557916 FAM46BQ96A09 425 aa21.06■□□□□ 0.96
SMAD6-202ENST00000557916 SELENOIQ9C0D9 397 aa21.06■□□□□ 0.96
SMAD6-202ENST00000557916 PPA2Q9H2U2 334 aa21.06■□□□□ 0.96
SMAD6-202ENST00000557916 TRAV24A0A0B4J272 114 aa21.05■□□□□ 0.96
SMAD6-202ENST00000557916 OR7C1O76099 320 aaPredicted RBP21.05■□□□□ 0.96
SMAD6-202ENST00000557916 BPNT1O95861 308 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms