RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 MRPS28Q9Y2Q9 187 aaKnown RBP11.35□□□□□ -0.59
SHMT2-234ENST00000557703 KPTNQ9Y664 436 aa11.35□□□□□ -0.59
SHMT2-234ENST00000557703 AUP1Q9Y679 476 aa11.35□□□□□ -0.59
SHMT2-234ENST00000557703 C2CD3Q4AC94 2353 aa11.35□□□□□ -0.59
SHMT2-234ENST00000557703 ARHGAP32A7KAX9 2087 aa11.34□□□□□ -0.59
SHMT2-234ENST00000557703 F8VVB4 439 aa11.34□□□□□ -0.59
SHMT2-234ENST00000557703 F8VWA3 439 aa11.34□□□□□ -0.59
SHMT2-234ENST00000557703 M0R1W7 72 aa11.34□□□□□ -0.59
SHMT2-234ENST00000557703 MGST3O14880 152 aa11.34□□□□□ -0.59
SHMT2-234ENST00000557703 ANGPTL7O43827 346 aa11.34□□□□□ -0.59
SHMT2-234ENST00000557703 ZNF737O75373 536 aa11.34□□□□□ -0.59
SHMT2-234ENST00000557703 GLAP06280 429 aa11.34□□□□□ -0.59
SHMT2-234ENST00000557703 CALRP27797 417 aaKnown RBP11.34□□□□□ -0.59
SHMT2-234ENST00000557703 MEF2CQ06413 473 aaPredicted RBP11.34□□□□□ -0.59
SHMT2-234ENST00000557703 NEDD8Q15843 81 aa11.34□□□□□ -0.59
SHMT2-234ENST00000557703 AWAT2Q6E213 333 aa11.34□□□□□ -0.59
SHMT2-234ENST00000557703 CD177Q8N6Q3 437 aa11.34□□□□□ -0.59
SHMT2-234ENST00000557703 FAM216BQ8N7L0 139 aa11.34□□□□□ -0.59
SHMT2-234ENST00000557703 ZNRF1Q8ND25 227 aa11.34□□□□□ -0.59
SHMT2-234ENST00000557703 TMEM185AQ8NFB2 350 aa11.34□□□□□ -0.59
SHMT2-234ENST00000557703 KCNG3Q8TAE7 436 aa11.34□□□□□ -0.59
SHMT2-234ENST00000557703 NANPQ8TBE9 248 aa11.34□□□□□ -0.59
SHMT2-234ENST00000557703 TMPRSS13Q9BYE2 586 aa11.34□□□□□ -0.59
SHMT2-234ENST00000557703 UNKLQ9H9P5 680 aaKnown RBP11.34□□□□□ -0.59
SHMT2-234ENST00000557703 ELL3Q9HB65 397 aaPredicted RBP11.34□□□□□ -0.59
SHMT2-234ENST00000557703 OR14J1Q9UGF5 321 aa11.34□□□□□ -0.59
SHMT2-234ENST00000557703 ING4Q9UNL4 249 aa11.34□□□□□ -0.59
SHMT2-234ENST00000557703 V9GY05 133 aa11.34□□□□□ -0.59
SHMT2-234ENST00000557703 ZFHX3Q15911 3703 aa11.34□□□□□ -0.59
SHMT2-234ENST00000557703 JMJD1CQ15652 2540 aa11.33□□□□□ -0.6
SHMT2-234ENST00000557703 SLC17A2O00624 439 aa11.33□□□□□ -0.6
SHMT2-234ENST00000557703 DEGS1O15121 323 aa11.33□□□□□ -0.6
SHMT2-234ENST00000557703 SLC22A1O15245 554 aa11.33□□□□□ -0.6
SHMT2-234ENST00000557703 RBP4P02753 201 aa11.33□□□□□ -0.6
SHMT2-234ENST00000557703 NDUFB7P17568 137 aa11.33□□□□□ -0.6
SHMT2-234ENST00000557703 ADRA2CP18825 462 aa11.33□□□□□ -0.6
SHMT2-234ENST00000557703 HTR2CP28335 458 aa11.33□□□□□ -0.6
SHMT2-234ENST00000557703 OR3A4PP47883 348 aa11.33□□□□□ -0.6
SHMT2-234ENST00000557703 COL10A1Q03692 680 aa11.33□□□□□ -0.6
SHMT2-234ENST00000557703 HNRNPA0Q13151 305 aaKnown RBP11.33□□□□□ -0.6
SHMT2-234ENST00000557703 IKZF1Q13422 519 aa11.33□□□□□ -0.6
SHMT2-234ENST00000557703 BLMHQ13867 455 aa11.33□□□□□ -0.6
SHMT2-234ENST00000557703 INSL4Q14641 139 aa11.33□□□□□ -0.6
SHMT2-234ENST00000557703 METTL11BQ5VVY1 283 aa11.33□□□□□ -0.6
SHMT2-234ENST00000557703 GLIPR1L1Q6UWM5 242 aa11.33□□□□□ -0.6
SHMT2-234ENST00000557703 GDPD3Q7L5L3 318 aa11.33□□□□□ -0.6
SHMT2-234ENST00000557703 C1QL2Q7Z5L3 287 aa11.33□□□□□ -0.6
SHMT2-234ENST00000557703 ASCC1Q8N9N2 400 aaKnown RBP11.33□□□□□ -0.6
SHMT2-234ENST00000557703 ORAI1Q96D31 301 aa11.33□□□□□ -0.6
SHMT2-234ENST00000557703 KCTD7Q96MP8 289 aa11.33□□□□□ -0.6
SHMT2-234ENST00000557703 PPIL3Q9H2H8 161 aaKnown RBP11.33□□□□□ -0.6
SHMT2-234ENST00000557703 MMP26Q9NRE1 261 aa11.33□□□□□ -0.6
SHMT2-234ENST00000557703 FBLN5Q9UBX5 448 aa11.33□□□□□ -0.6
SHMT2-234ENST00000557703 ST3GAL6Q9Y274 331 aa11.33□□□□□ -0.6
SHMT2-234ENST00000557703 MAGEA13PA6NCF6 341 aa11.32□□□□□ -0.6
SHMT2-234ENST00000557703 C22orf46C9J442 243 aa11.32□□□□□ -0.6
SHMT2-234ENST00000557703 INAFM1C9JVW0 142 aa11.32□□□□□ -0.6
SHMT2-234ENST00000557703 HTR3BO95264 441 aa11.32□□□□□ -0.6
SHMT2-234ENST00000557703 OR2H2O95918 312 aa11.32□□□□□ -0.6
SHMT2-234ENST00000557703 FAM157CP0CG43 387 aa11.32□□□□□ -0.6
SHMT2-234ENST00000557703 CD36P16671 472 aa11.32□□□□□ -0.6
SHMT2-234ENST00000557703 RBMXP38159 391 aaKnown RBP11.32□□□□□ -0.6
SHMT2-234ENST00000557703 RBM11P57052 281 aaKnown RBP11.32□□□□□ -0.6
SHMT2-234ENST00000557703 RPL31P62899 125 aaKnown RBP11.32□□□□□ -0.6
SHMT2-234ENST00000557703 HOXA4Q00056 320 aaPredicted RBP11.32□□□□□ -0.6
SHMT2-234ENST00000557703 PDCD1Q15116 288 aa11.32□□□□□ -0.6
SHMT2-234ENST00000557703 FAM27D1Q5T7N8 215 aa11.32□□□□□ -0.6
SHMT2-234ENST00000557703 Q6P435 159 aa11.32□□□□□ -0.6
SHMT2-234ENST00000557703 METAP1DQ6UB28 335 aaPredicted RBP11.32□□□□□ -0.6
SHMT2-234ENST00000557703 C17orf107Q6ZR85 190 aa11.32□□□□□ -0.6
SHMT2-234ENST00000557703 OR2W3Q7Z3T1 314 aa11.32□□□□□ -0.6
SHMT2-234ENST00000557703 UPRTQ96BW1 309 aa11.32□□□□□ -0.6
SHMT2-234ENST00000557703 MRPS26Q9BYN8 205 aaKnown RBP11.32□□□□□ -0.6
SHMT2-234ENST00000557703 BARHL1Q9BZE3 327 aa11.32□□□□□ -0.6
SHMT2-234ENST00000557703 TXNL4BQ9NX01 149 aaKnown RBP11.32□□□□□ -0.6
SHMT2-234ENST00000557703 MXRA5Q9NR99 2828 aa11.31□□□□□ -0.6
SHMT2-234ENST00000557703 A0A0G2JK05 382 aa11.31□□□□□ -0.6
SHMT2-234ENST00000557703 hADV38S2A0JD32 116 aa11.31□□□□□ -0.6
SHMT2-234ENST00000557703 CA11O75493 328 aa11.31□□□□□ -0.6
SHMT2-234ENST00000557703 CDRT1O95170 752 aa11.31□□□□□ -0.6
SHMT2-234ENST00000557703 IFNA2P01563 188 aa11.31□□□□□ -0.6
SHMT2-234ENST00000557703 ZNF44P15621 663 aa11.31□□□□□ -0.6
SHMT2-234ENST00000557703 SRD5A1P18405 259 aa11.31□□□□□ -0.6
SHMT2-234ENST00000557703 RAB3BP20337 219 aa11.31□□□□□ -0.6
SHMT2-234ENST00000557703 RIPPLY3P57055 190 aa11.31□□□□□ -0.6
SHMT2-234ENST00000557703 RBM39Q14498 530 aaKnown RBP11.31□□□□□ -0.6
SHMT2-234ENST00000557703 SLC22A6Q4U2R8 563 aa11.31□□□□□ -0.6
SHMT2-234ENST00000557703 RNF144BQ7Z419 303 aa11.31□□□□□ -0.6
SHMT2-234ENST00000557703 CROCCP3Q8IVE0 287 aa11.31□□□□□ -0.6
SHMT2-234ENST00000557703 OR4D6Q8NGJ1 314 aa11.31□□□□□ -0.6
SHMT2-234ENST00000557703 H1FXQ92522 213 aaKnown RBP11.31□□□□□ -0.6
SHMT2-234ENST00000557703 WDFY2Q96P53 400 aa11.31□□□□□ -0.6
SHMT2-234ENST00000557703 METTL8Q9H825 291 aaKnown RBP11.31□□□□□ -0.6
SHMT2-234ENST00000557703 PLGRKTQ9HBL7 147 aa11.31□□□□□ -0.6
SHMT2-234ENST00000557703 OPN4Q9UHM6 478 aa11.31□□□□□ -0.6
SHMT2-234ENST00000557703 A0A1W2PQ09 198 aa11.3□□□□□ -0.6
SHMT2-234ENST00000557703 FCN3O75636 299 aa11.3□□□□□ -0.6
SHMT2-234ENST00000557703 ARSBP15848 533 aa11.3□□□□□ -0.6
SHMT2-234ENST00000557703 SERPINA2P20848 420 aa11.3□□□□□ -0.6
SHMT2-234ENST00000557703 GABRR1P24046 479 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms