RNA–Protein interactions for RNA: ENST00000557427.5

SHMT2-230, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-230ENST00000557427 FAM71F1Q96KD3 344 aaPredicted RBP10.48□□□□□ -0.73
SHMT2-230ENST00000557427 ZNF48Q96MX3 618 aaPredicted RBP10.48□□□□□ -0.73
SHMT2-230ENST00000557427 CNTD2Q9H8S5 307 aa10.48□□□□□ -0.73
SHMT2-230ENST00000557427 MSL2Q9HCI7 577 aa10.48□□□□□ -0.73
SHMT2-230ENST00000557427 MTFP1Q9UDX5 166 aa10.48□□□□□ -0.73
SHMT2-230ENST00000557427 RAB22AQ9UL26 194 aa10.48□□□□□ -0.73
SHMT2-230ENST00000557427 OR6C6A6NF89 314 aa10.47□□□□□ -0.73
SHMT2-230ENST00000557427 DHRS7CA6NNS2 312 aa10.47□□□□□ -0.73
SHMT2-230ENST00000557427 F5H5K5 113 aa10.47□□□□□ -0.73
SHMT2-230ENST00000557427 TIMM8AO60220 97 aaPredicted RBP10.47□□□□□ -0.73
SHMT2-230ENST00000557427 MTRF1O75570 445 aaKnown RBP10.47□□□□□ -0.73
SHMT2-230ENST00000557427 DHRS3O75911 302 aa10.47□□□□□ -0.73
SHMT2-230ENST00000557427 IGHV1-46P01743 117 aa10.47□□□□□ -0.73
SHMT2-230ENST00000557427 MT-ND4P03905 459 aa10.47□□□□□ -0.73
SHMT2-230ENST00000557427 RNASE1P07998 156 aaKnown RBP10.47□□□□□ -0.73
SHMT2-230ENST00000557427 CSF1P09603 554 aa10.47□□□□□ -0.73
SHMT2-230ENST00000557427 OMGP23515 440 aa10.47□□□□□ -0.73
SHMT2-230ENST00000557427 FPR2P25090 351 aa10.47□□□□□ -0.73
SHMT2-230ENST00000557427 PRSS3P35030 304 aa10.47□□□□□ -0.73
SHMT2-230ENST00000557427 RAB25P57735 213 aa10.47□□□□□ -0.73
SHMT2-230ENST00000557427 RRAS2P62070 204 aaPredicted RBP10.47□□□□□ -0.73
SHMT2-230ENST00000557427 PSG7Q13046 419 aa10.47□□□□□ -0.73
SHMT2-230ENST00000557427 ATAD3CQ5T2N8 411 aa10.47□□□□□ -0.73
SHMT2-230ENST00000557427 AVPI1Q5T686 147 aa10.47□□□□□ -0.73
SHMT2-230ENST00000557427 OR2W3Q7Z3T1 314 aa10.47□□□□□ -0.73
SHMT2-230ENST00000557427 C1orf174Q8IYL3 243 aa10.47□□□□□ -0.73
SHMT2-230ENST00000557427 OR5AS1Q8N127 324 aa10.47□□□□□ -0.73
SHMT2-230ENST00000557427 BCL6BQ8N143 479 aaPredicted RBP10.47□□□□□ -0.73
SHMT2-230ENST00000557427 ZBTB8BQ8NAP8 495 aaPredicted RBP10.47□□□□□ -0.73
SHMT2-230ENST00000557427 OR52H1Q8NGJ2 320 aa10.47□□□□□ -0.73
SHMT2-230ENST00000557427 OR56B4Q8NH76 319 aa10.47□□□□□ -0.73
SHMT2-230ENST00000557427 WFDC12Q8WWY7 111 aa10.47□□□□□ -0.73
SHMT2-230ENST00000557427 LYZL4Q96KX0 146 aa10.47□□□□□ -0.73
SHMT2-230ENST00000557427 NUDT16L1Q9BRJ7 211 aaKnown RBP10.47□□□□□ -0.73
SHMT2-230ENST00000557427 OR10A2Q9H208 303 aa10.47□□□□□ -0.73
SHMT2-230ENST00000557427 KCNK15Q9H427 330 aa10.47□□□□□ -0.73
SHMT2-230ENST00000557427 SCPEP1Q9HB40 452 aa10.47□□□□□ -0.73
SHMT2-230ENST00000557427 KLK11Q9UBX7 282 aa10.47□□□□□ -0.73
SHMT2-230ENST00000557427 ATPIF1Q9UII2 106 aa10.47□□□□□ -0.73
SHMT2-230ENST00000557427 N6AMT1Q9Y5N5 214 aa10.47□□□□□ -0.73
SHMT2-230ENST00000557427 IGHV1-69-2A0A0G2JMI3 117 aa10.46□□□□□ -0.73
SHMT2-230ENST00000557427 METTL21EPA6NDL7 271 aa10.46□□□□□ -0.73
SHMT2-230ENST00000557427 J3QLI3 93 aa10.46□□□□□ -0.73
SHMT2-230ENST00000557427 RP2O75695 350 aa10.46□□□□□ -0.73
SHMT2-230ENST00000557427 KDM4BO94953 1096 aa10.46□□□□□ -0.73
SHMT2-230ENST00000557427 H2AFB2P0C5Z0 115 aa10.46□□□□□ -0.73
SHMT2-230ENST00000557427 FAUP35544 74 aaKnown RBP10.46□□□□□ -0.73
SHMT2-230ENST00000557427 ZNF93P35789 620 aaPredicted RBP10.46□□□□□ -0.73
SHMT2-230ENST00000557427 SLC6A9P48067 706 aa10.46□□□□□ -0.73
SHMT2-230ENST00000557427 GSK3AP49840 483 aa10.46□□□□□ -0.73
SHMT2-230ENST00000557427 KRTAP10-3P60369 221 aa10.46□□□□□ -0.73
SHMT2-230ENST00000557427 QRFPP83859 136 aa10.46□□□□□ -0.73
SHMT2-230ENST00000557427 HLXQ14774 488 aaPredicted RBP10.46□□□□□ -0.73
SHMT2-230ENST00000557427 SPRNQ5BIV9 151 aa10.46□□□□□ -0.73
SHMT2-230ENST00000557427 UTS2BQ765I0 119 aa10.46□□□□□ -0.73
SHMT2-230ENST00000557427 NAA40Q86UY6 237 aa10.46□□□□□ -0.73
SHMT2-230ENST00000557427 TCTE3Q8IZS6 198 aa10.46□□□□□ -0.73
SHMT2-230ENST00000557427 GPX8Q8TED1 209 aa10.46□□□□□ -0.73
SHMT2-230ENST00000557427 PP6455Q8WZ26 134 aa10.46□□□□□ -0.73
SHMT2-230ENST00000557427 CCL17Q92583 94 aa10.46□□□□□ -0.73
SHMT2-230ENST00000557427 CITED1Q99966 193 aa10.46□□□□□ -0.73
SHMT2-230ENST00000557427 ZNF665Q9H7R5 613 aa10.46□□□□□ -0.73
SHMT2-230ENST00000557427 NUDT15Q9NV35 164 aa10.46□□□□□ -0.73
SHMT2-230ENST00000557427 NKIRAS2Q9NYR9 191 aa10.46□□□□□ -0.73
SHMT2-230ENST00000557427 PTTG3PQ9NZH4 202 aa10.46□□□□□ -0.73
SHMT2-230ENST00000557427 ZNF69Q9UC07 566 aa10.46□□□□□ -0.73
SHMT2-230ENST00000557427 ZNF107Q9UII5 783 aaPredicted RBP10.46□□□□□ -0.73
SHMT2-230ENST00000557427 ZNF391Q9UJN7 358 aa10.46□□□□□ -0.73
SHMT2-230ENST00000557427 MMP24Q9Y5R2 645 aa10.46□□□□□ -0.73
SHMT2-230ENST00000557427 ZSCAN5BA6NJL1 495 aa10.45□□□□□ -0.74
SHMT2-230ENST00000557427 TMEM14DPA8MWL7 114 aa10.45□□□□□ -0.74
SHMT2-230ENST00000557427 GMDSO60547 372 aa10.45□□□□□ -0.74
SHMT2-230ENST00000557427 ICMTO60725 284 aa10.45□□□□□ -0.74
SHMT2-230ENST00000557427 UBBP0CG47 229 aa10.45□□□□□ -0.74
SHMT2-230ENST00000557427 PTHLHP12272 177 aa10.45□□□□□ -0.74
SHMT2-230ENST00000557427 ANOS1P23352 680 aa10.45□□□□□ -0.74
SHMT2-230ENST00000557427 CCR6P51684 374 aa10.45□□□□□ -0.74
SHMT2-230ENST00000557427 ACTBP60709 375 aa10.45□□□□□ -0.74
SHMT2-230ENST00000557427 MRPS11P82912 194 aaKnown RBP10.45□□□□□ -0.74
SHMT2-230ENST00000557427 BAMBIQ13145 260 aa10.45□□□□□ -0.74
SHMT2-230ENST00000557427 SLC9A3R2Q15599 337 aa10.45□□□□□ -0.74
SHMT2-230ENST00000557427 FAM189A2Q15884 450 aa10.45□□□□□ -0.74
SHMT2-230ENST00000557427 HFEQ30201 348 aa10.45□□□□□ -0.74
SHMT2-230ENST00000557427 DCAF12L2Q5VW00 463 aa10.45□□□□□ -0.74
SHMT2-230ENST00000557427 RBMS3Q6XE24 437 aaKnown RBP10.45□□□□□ -0.74
SHMT2-230ENST00000557427 FAM46BQ96A09 425 aa10.45□□□□□ -0.74
SHMT2-230ENST00000557427 NKX3-1Q99801 234 aaPredicted RBP10.45□□□□□ -0.74
SHMT2-230ENST00000557427 EGLN1Q9GZT9 426 aa10.45□□□□□ -0.74
SHMT2-230ENST00000557427 GHITMQ9H3K2 345 aa10.45□□□□□ -0.74
SHMT2-230ENST00000557427 C7orf69Q9H7B7 122 aa10.45□□□□□ -0.74
SHMT2-230ENST00000557427 SAP30LQ9HAJ7 183 aa10.45□□□□□ -0.74
SHMT2-230ENST00000557427 MRPL15Q9P015 296 aaKnown RBP10.45□□□□□ -0.74
SHMT2-230ENST00000557427 GHRLQ9UBU3 117 aa10.45□□□□□ -0.74
SHMT2-230ENST00000557427 PURGQ9UJV8 347 aaKnown RBP10.45□□□□□ -0.74
SHMT2-230ENST00000557427 TRAV6A0A075B6T7 132 aa10.44□□□□□ -0.74
SHMT2-230ENST00000557427 C5orf63A6NC05 138 aa10.44□□□□□ -0.74
SHMT2-230ENST00000557427 PRAF2O60831 178 aa10.44□□□□□ -0.74
SHMT2-230ENST00000557427 PRB2P02812 416 aaPredicted RBP10.44□□□□□ -0.74
SHMT2-230ENST00000557427 LPLP06858 475 aa10.44□□□□□ -0.74
SHMT2-230ENST00000557427 UNC119Q13432 240 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms