RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 OR5M10Q6IEU7 315 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 LAIR2Q6ISS4 152 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 TTC33Q6PID6 262 aaPredicted RBP2.33□□□□□ -2.04
VRK1-207ENST00000557352 ZNF773Q6PK81 442 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 ARSKQ6UWY0 536 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 ZNF620Q6ZNG0 422 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 RTL4Q6ZR62 310 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 LANCL3Q6ZV70 420 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 GRINAQ7Z429 371 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 RAB43Q86YS6 212 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 RBM45Q8IUH3 476 aaKnown RBP2.33□□□□□ -2.04
VRK1-207ENST00000557352 HS3ST5Q8IZT8 346 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 FADS6Q8N9I5 356 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 OR11G2Q8NGC1 345 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 OR52B4Q8NGK2 314 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 OR5W2Q8NH69 310 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 ZNF420Q8TAQ5 688 aaPredicted RBP2.33□□□□□ -2.04
VRK1-207ENST00000557352 TEX47Q8TBZ9 253 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 MARCH1Q8TCQ1 289 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 PAQR8Q8TEZ7 354 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 TMEM239Q8WW34 195 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 CYGBQ8WWM9 190 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 TMEM234Q8WY98 164 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 UPRTQ96BW1 309 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 TMEM80Q96HE8 168 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 CNBD2Q96M20 576 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 Q96MT0 163 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 SLC38A2Q96QD8 506 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 DOK1Q99704 481 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 NIPSNAP1Q9BPW8 284 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 WFDC6Q9BQY6 131 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 CDCA4Q9BXL8 241 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 TBL1XR1Q9BZK7 514 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 NDEL1Q9GZM8 345 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 ING2Q9H160 280 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 ASCL3Q9NQ33 180 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 SDHAF3Q9NRP4 125 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 ZNF229Q9UJW7 825 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 FOXJ3Q9UPW0 622 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 RNF6Q9Y252 685 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 FARSAQ9Y285 508 aaKnown RBP2.33□□□□□ -2.04
VRK1-207ENST00000557352 SIGLEC7Q9Y286 467 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 YARS2Q9Y2Z4 477 aaKnown RBP2.33□□□□□ -2.04
VRK1-207ENST00000557352 TPRKBQ9Y3C4 175 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 MED31Q9Y3C7 131 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 WIF1Q9Y5W5 379 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 CHCHD2Q9Y6H1 151 aaPredicted RBP2.33□□□□□ -2.04
VRK1-207ENST00000557352 CDH10Q9Y6N8 788 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 U3KQV3 271 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 SPTBN1Q01082 2364 aaKnown RBP2.33□□□□□ -2.04
VRK1-207ENST00000557352 DSCAML1Q8TD84 2053 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 NCOR2Q9Y618 2525 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 PRR14LQ5THK1 2151 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 CFAP47Q6ZTR5 3102 aa2.33□□□□□ -2.04
VRK1-207ENST00000557352 IGF2RP11717 2491 aa2.32□□□□□ -2.04
VRK1-207ENST00000557352 CADP27708 2225 aa2.32□□□□□ -2.04
VRK1-207ENST00000557352 TRBV11-1A0A0K0K1C0 115 aa2.32□□□□□ -2.04
VRK1-207ENST00000557352 LOC102725191A0A1B0GVB3 256 aa2.32□□□□□ -2.04
VRK1-207ENST00000557352 RNF222A6NCQ9 220 aa2.32□□□□□ -2.04
VRK1-207ENST00000557352 CPSF4LA6NMK7 179 aaKnown RBP2.32□□□□□ -2.04
VRK1-207ENST00000557352 CENPBD1B2RD01 187 aa2.32□□□□□ -2.04
VRK1-207ENST00000557352 BHLHE40O14503 412 aa2.32□□□□□ -2.04
VRK1-207ENST00000557352 CDC42EP2O14613 210 aa2.32□□□□□ -2.04
VRK1-207ENST00000557352 OR2T1O43869 369 aa2.32□□□□□ -2.04
VRK1-207ENST00000557352 ICOSLGO75144 302 aa2.32□□□□□ -2.04
VRK1-207ENST00000557352 REM1O75628 298 aa2.32□□□□□ -2.04
VRK1-207ENST00000557352 SNX4O95219 450 aa2.32□□□□□ -2.04
VRK1-207ENST00000557352 IGHMP01871 453 aa2.32□□□□□ -2.04
VRK1-207ENST00000557352 RPSAP08865 295 aaKnown RBP2.32□□□□□ -2.04
VRK1-207ENST00000557352 ASAH2BP0C7U1 165 aa2.32□□□□□ -2.04
VRK1-207ENST00000557352 LIPCP11150 499 aa2.32□□□□□ -2.04
VRK1-207ENST00000557352 ANXA3P12429 323 aa2.32□□□□□ -2.04
VRK1-207ENST00000557352 FUT1P19526 365 aa2.32□□□□□ -2.04
VRK1-207ENST00000557352 TCN2P20062 427 aa2.32□□□□□ -2.04
VRK1-207ENST00000557352 PCMT1P22061 227 aa2.32□□□□□ -2.04
VRK1-207ENST00000557352 GALP22466 123 aa2.32□□□□□ -2.04
VRK1-207ENST00000557352 DCKP27707 260 aa2.32□□□□□ -2.04
VRK1-207ENST00000557352 PTGDSP41222 190 aa2.32□□□□□ -2.04
VRK1-207ENST00000557352 NOVA1P51513 510 aaKnown RBP2.32□□□□□ -2.04
VRK1-207ENST00000557352 SSR4P51571 173 aa2.32□□□□□ -2.04
VRK1-207ENST00000557352 POLR2HP52434 150 aaKnown RBP2.32□□□□□ -2.04
VRK1-207ENST00000557352 MLF1P58340 268 aa2.32□□□□□ -2.04
VRK1-207ENST00000557352 FXYD6P3P58550 94 aa2.32□□□□□ -2.04
VRK1-207ENST00000557352 RND3P61587 244 aa2.32□□□□□ -2.04
VRK1-207ENST00000557352 ZNF117Q03924 483 aa2.32□□□□□ -2.04
VRK1-207ENST00000557352 RAB40BQ12829 278 aa2.32□□□□□ -2.04
VRK1-207ENST00000557352 PDZK1IP1Q13113 114 aa2.32□□□□□ -2.04
VRK1-207ENST00000557352 SCGB2A2Q13296 93 aa2.32□□□□□ -2.04
VRK1-207ENST00000557352 GGTLC2Q14390 218 aa2.32□□□□□ -2.04
VRK1-207ENST00000557352 PGGHGQ32M88 737 aa2.32□□□□□ -2.04
VRK1-207ENST00000557352 PLPPR5Q32ZL2 321 aa2.32□□□□□ -2.04
VRK1-207ENST00000557352 ZBED5Q49AG3 693 aa2.32□□□□□ -2.04
VRK1-207ENST00000557352 SYT6Q5T7P8 510 aaPredicted RBP2.32□□□□□ -2.04
VRK1-207ENST00000557352 AADACL4Q5VUY2 407 aa2.32□□□□□ -2.04
VRK1-207ENST00000557352 UBE2UQ5VVX9 321 aa2.32□□□□□ -2.04
VRK1-207ENST00000557352 NXNL2Q5VZ03 156 aa2.32□□□□□ -2.04
VRK1-207ENST00000557352 XAF1Q6GPH4 301 aa2.32□□□□□ -2.04
VRK1-207ENST00000557352 SMARCD3Q6STE5 483 aa2.32□□□□□ -2.04
VRK1-207ENST00000557352 CASP12Q6UXS9 341 aa2.32□□□□□ -2.04
VRK1-207ENST00000557352 STAC2Q6ZMT1 411 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms