RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 MFSD2BA6NFX1 497 aa13.28□□□□□ -0.28
TMEM55B-207ENST00000557041 B4E171 279 aa13.28□□□□□ -0.28
TMEM55B-207ENST00000557041 PDCD6O75340 191 aa13.28□□□□□ -0.28
TMEM55B-207ENST00000557041 IGKV1D-12P01611 117 aa13.28□□□□□ -0.28
TMEM55B-207ENST00000557041 FCGR3AP08637 254 aa13.28□□□□□ -0.28
TMEM55B-207ENST00000557041 TSPAN7P41732 249 aa13.28□□□□□ -0.28
TMEM55B-207ENST00000557041 SMUG1Q53HV7 270 aa13.28□□□□□ -0.28
TMEM55B-207ENST00000557041 VAX1Q5SQQ9 334 aa13.28□□□□□ -0.28
TMEM55B-207ENST00000557041 FER1L6-AS2Q96M78 137 aa13.28□□□□□ -0.28
TMEM55B-207ENST00000557041 TRIB1Q96RU8 372 aa13.28□□□□□ -0.28
TMEM55B-207ENST00000557041 FBXL17Q9UF56 701 aa13.28□□□□□ -0.28
TMEM55B-207ENST00000557041 SYNGR1O43759 233 aa13.27□□□□□ -0.28
TMEM55B-207ENST00000557041 WDR1O75083 606 aa13.27□□□□□ -0.28
TMEM55B-207ENST00000557041 S100GP29377 79 aa13.27□□□□□ -0.28
TMEM55B-207ENST00000557041 HIST3H3Q16695 136 aa13.27□□□□□ -0.28
TMEM55B-207ENST00000557041 AADACL3Q5VUY0 350 aa13.27□□□□□ -0.28
TMEM55B-207ENST00000557041 Q96M66 194 aa13.27□□□□□ -0.28
TMEM55B-207ENST00000557041 SLC2A9Q9NRM0 540 aa13.27□□□□□ -0.28
TMEM55B-207ENST00000557041 SLC2A8Q9NY64 477 aa13.27□□□□□ -0.28
TMEM55B-207ENST00000557041 FOXD3Q9UJU5 478 aaPredicted RBP13.27□□□□□ -0.28
TMEM55B-207ENST00000557041 ATP6V1G2-DDX39BF2Z307 99 aa13.27□□□□□ -0.28
TMEM55B-207ENST00000557041 C1QL1O75973 258 aa13.27□□□□□ -0.28
TMEM55B-207ENST00000557041 SERPINE2P07093 398 aa13.27□□□□□ -0.28
TMEM55B-207ENST00000557041 CALCRP30988 508 aa13.27□□□□□ -0.28
TMEM55B-207ENST00000557041 FABP6P51161 128 aa13.27□□□□□ -0.28
TMEM55B-207ENST00000557041 TMEM33P57088 247 aa13.27□□□□□ -0.28
TMEM55B-207ENST00000557041 ALKBH6Q3KRA9 238 aa13.27□□□□□ -0.28
TMEM55B-207ENST00000557041 BEND4Q6ZU67 534 aa13.27□□□□□ -0.28
TMEM55B-207ENST00000557041 PIK3IP1Q96FE7 263 aa13.27□□□□□ -0.28
TMEM55B-207ENST00000557041 MARS2Q96GW9 593 aaKnown RBP13.27□□□□□ -0.28
TMEM55B-207ENST00000557041 SH3BGRL2Q9UJC5 107 aa13.27□□□□□ -0.28
TMEM55B-207ENST00000557041 TRAPPC2LQ9UL33 140 aa13.27□□□□□ -0.28
TMEM55B-207ENST00000557041 NKX2-8O15522 239 aa13.27□□□□□ -0.29
TMEM55B-207ENST00000557041 PVALBP20472 110 aaPredicted RBP13.27□□□□□ -0.29
TMEM55B-207ENST00000557041 Q6ZRG5 221 aa13.27□□□□□ -0.29
TMEM55B-207ENST00000557041 DNM1P46Q6ZS02 220 aa13.27□□□□□ -0.29
TMEM55B-207ENST00000557041 FAM213BQ8TBF2 198 aa13.27□□□□□ -0.29
TMEM55B-207ENST00000557041 TMEM9BQ9NQ34 198 aa13.27□□□□□ -0.29
TMEM55B-207ENST00000557041 RNF150Q9ULK6 438 aa13.27□□□□□ -0.29
TMEM55B-207ENST00000557041 PPP1R3CQ9UQK1 317 aa13.27□□□□□ -0.29
TMEM55B-207ENST00000557041 BORCS7-ASMTA0A0B4J1R7 106 aa13.26□□□□□ -0.29
TMEM55B-207ENST00000557041 SLC22A20A6NK97 555 aa13.26□□□□□ -0.29
TMEM55B-207ENST00000557041 SSSCA1O60232 199 aa13.26□□□□□ -0.29
TMEM55B-207ENST00000557041 SCTP09683 121 aa13.26□□□□□ -0.29
TMEM55B-207ENST00000557041 SP9P0CG40 484 aa13.26□□□□□ -0.29
TMEM55B-207ENST00000557041 SUPT4H1P63272 117 aaKnown RBP13.26□□□□□ -0.29
TMEM55B-207ENST00000557041 IZUMO4Q1ZYL8 232 aa13.26□□□□□ -0.29
TMEM55B-207ENST00000557041 PRSS54Q6PEW0 395 aa13.26□□□□□ -0.29
TMEM55B-207ENST00000557041 ZNF552Q9H707 407 aaPredicted RBP13.26□□□□□ -0.29
TMEM55B-207ENST00000557041 ZNF107Q9UII5 783 aaPredicted RBP13.26□□□□□ -0.29
TMEM55B-207ENST00000557041 DUSP13Q9UII6 198 aa13.26□□□□□ -0.29
TMEM55B-207ENST00000557041 TRGV5A0A0B4J1U4 118 aa13.26□□□□□ -0.29
TMEM55B-207ENST00000557041 CD300LBA8K4G0 201 aa13.26□□□□□ -0.29
TMEM55B-207ENST00000557041 F8VVB4 439 aa13.26□□□□□ -0.29
TMEM55B-207ENST00000557041 F8VWA3 439 aa13.26□□□□□ -0.29
TMEM55B-207ENST00000557041 NEURL1O76050 574 aa13.26□□□□□ -0.29
TMEM55B-207ENST00000557041 NXPH2O95156 264 aa13.26□□□□□ -0.29
TMEM55B-207ENST00000557041 MECP2P51608 486 aaKnown RBP13.26□□□□□ -0.29
TMEM55B-207ENST00000557041 SRSF6Q13247 344 aaKnown RBP13.26□□□□□ -0.29
TMEM55B-207ENST00000557041 KCNMB1Q16558 191 aa13.26□□□□□ -0.29
TMEM55B-207ENST00000557041 TFAP2EQ6VUC0 442 aa13.26□□□□□ -0.29
TMEM55B-207ENST00000557041 MYPOPQ86VE0 399 aaPredicted RBP13.26□□□□□ -0.29
TMEM55B-207ENST00000557041 CCDC71LQ8N9Z2 235 aa13.26□□□□□ -0.29
TMEM55B-207ENST00000557041 LIPGQ9Y5X9 500 aa13.26□□□□□ -0.29
TMEM55B-207ENST00000557041 H7C2Y5 167 aa13.26□□□□□ -0.29
TMEM55B-207ENST00000557041 SHOXO15266 292 aa13.26□□□□□ -0.29
TMEM55B-207ENST00000557041 CMTM1Q8IZ96 169 aa13.26□□□□□ -0.29
TMEM55B-207ENST00000557041 PRRX2Q99811 253 aa13.26□□□□□ -0.29
TMEM55B-207ENST00000557041 RNF126Q9BV68 326 aa13.26□□□□□ -0.29
TMEM55B-207ENST00000557041 FAM86C1Q9NVL1 165 aa13.26□□□□□ -0.29
TMEM55B-207ENST00000557041 V9GYS6 101 aa13.26□□□□□ -0.29
TMEM55B-207ENST00000557041 ABCA1O95477 2261 aa13.25□□□□□ -0.29
TMEM55B-207ENST00000557041 CD8AP01732 235 aa13.25□□□□□ -0.29
TMEM55B-207ENST00000557041 RPS16P62249 146 aaKnown RBP13.25□□□□□ -0.29
TMEM55B-207ENST00000557041 POLR2GP62487 172 aaKnown RBP eCLIP13.25□□□□□ -0.29
TMEM55B-207ENST00000557041 TLE1Q04724 770 aa13.25□□□□□ -0.29
TMEM55B-207ENST00000557041 CLPPQ16740 277 aaPredicted RBP13.25□□□□□ -0.29
TMEM55B-207ENST00000557041 RTL6Q6ICC9 239 aa13.25□□□□□ -0.29
TMEM55B-207ENST00000557041 FAHD2BQ6P2I3 314 aaPredicted RBP13.25□□□□□ -0.29
TMEM55B-207ENST00000557041 ZFP82Q8N141 532 aa13.25□□□□□ -0.29
TMEM55B-207ENST00000557041 LGI3Q8N145 548 aa13.25□□□□□ -0.29
TMEM55B-207ENST00000557041 FAHD2AQ96GK7 314 aa13.25□□□□□ -0.29
TMEM55B-207ENST00000557041 KLF13Q9Y2Y9 288 aaPredicted RBP13.25□□□□□ -0.29
TMEM55B-207ENST00000557041 FAM74A7A6NL05 159 aa13.25□□□□□ -0.29
TMEM55B-207ENST00000557041 IGHV3-13P01766 116 aa13.25□□□□□ -0.29
TMEM55B-207ENST00000557041 IGHV3-7P01780 117 aa13.25□□□□□ -0.29
TMEM55B-207ENST00000557041 NAT2P11245 290 aa13.25□□□□□ -0.29
TMEM55B-207ENST00000557041 RPL35P42766 123 aaKnown RBP13.25□□□□□ -0.29
TMEM55B-207ENST00000557041 B3GALT5-AS1P59052 145 aa13.25□□□□□ -0.29
TMEM55B-207ENST00000557041 FAM74A3Q4VXF1 159 aa13.25□□□□□ -0.29
TMEM55B-207ENST00000557041 ZNF766Q5HY98 468 aa13.25□□□□□ -0.29
TMEM55B-207ENST00000557041 CBLN2Q8IUK8 224 aa13.25□□□□□ -0.29
TMEM55B-207ENST00000557041 MRPS24Q96EL2 167 aaKnown RBP13.25□□□□□ -0.29
TMEM55B-207ENST00000557041 HS3ST6Q96QI5 342 aa13.25□□□□□ -0.29
TMEM55B-207ENST00000557041 NKX6-2Q9C056 277 aaPredicted RBP13.25□□□□□ -0.29
TMEM55B-207ENST00000557041 PIGMQ9H3S5 423 aa13.25□□□□□ -0.29
TMEM55B-207ENST00000557041 FBXO7Q9Y3I1 522 aa13.25□□□□□ -0.29
TMEM55B-207ENST00000557041 DOCK11Q5JSL3 2073 aa13.25□□□□□ -0.29
TMEM55B-207ENST00000557041 AGFG2O95081 481 aa13.25□□□□□ -0.29
TMEM55B-207ENST00000557041 SNRNP70P08621 437 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms