RNA–Protein interactions for RNA: ENST00000556916.5

FOXN3-213, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-213ENST00000556916 CHRNA9Q9UGM1 479 aa3.25□□□□□ -1.89
FOXN3-213ENST00000556916 IL17BQ9UHF5 180 aa3.25□□□□□ -1.89
FOXN3-213ENST00000556916 VAX2Q9UIW0 290 aa3.25□□□□□ -1.89
FOXN3-213ENST00000556916 KCNS2Q9ULS6 477 aa3.25□□□□□ -1.89
FOXN3-213ENST00000556916 GPR132Q9UNW8 380 aa3.25□□□□□ -1.89
FOXN3-213ENST00000556916 NTNG1Q9Y2I2 539 aa3.25□□□□□ -1.89
FOXN3-213ENST00000556916 TMED7Q9Y3B3 224 aa3.25□□□□□ -1.89
FOXN3-213ENST00000556916 KCNE3Q9Y6H6 103 aa3.25□□□□□ -1.89
FOXN3-213ENST00000556916 SCN10AQ9Y5Y9 1956 aa3.25□□□□□ -1.89
FOXN3-213ENST00000556916 NOTCH3Q9UM47 2321 aa3.25□□□□□ -1.89
FOXN3-213ENST00000556916 TRAV8-7A0A075B6U6 113 aa3.24□□□□□ -1.89
FOXN3-213ENST00000556916 TRAV27A0A087WT01 109 aa3.24□□□□□ -1.89
FOXN3-213ENST00000556916 A0A0A6YYD5 115 aa3.24□□□□□ -1.89
FOXN3-213ENST00000556916 TGIF2-C20orf24A0A0A6YYL0 155 aa3.24□□□□□ -1.89
FOXN3-213ENST00000556916 A0A1W2PN81 502 aa3.24□□□□□ -1.89
FOXN3-213ENST00000556916 TCRBV21S2A2A0A5A6 115 aa3.24□□□□□ -1.89
FOXN3-213ENST00000556916 OR4C45A6NMZ5 311 aa3.24□□□□□ -1.89
FOXN3-213ENST00000556916 ZNF727A8MUV8 499 aa3.24□□□□□ -1.89
FOXN3-213ENST00000556916 A8MXE2 369 aa3.24□□□□□ -1.89
FOXN3-213ENST00000556916 CLDN34H7C241 214 aa3.24□□□□□ -1.89
FOXN3-213ENST00000556916 RTCAO00442 366 aaKnown RBP3.24□□□□□ -1.89
FOXN3-213ENST00000556916 CXCL11O14625 94 aa3.24□□□□□ -1.89
FOXN3-213ENST00000556916 ARPC3O15145 178 aa3.24□□□□□ -1.89
FOXN3-213ENST00000556916 NME2P1O60361 137 aa3.24□□□□□ -1.89
FOXN3-213ENST00000556916 GPR137BO60478 399 aa3.24□□□□□ -1.89
FOXN3-213ENST00000556916 CIDEAO60543 219 aa3.24□□□□□ -1.89
FOXN3-213ENST00000556916 ERAL1O75616 437 aaKnown RBP3.24□□□□□ -1.89
FOXN3-213ENST00000556916 UPK3AO75631 287 aa3.24□□□□□ -1.89
FOXN3-213ENST00000556916 RPP14O95059 124 aaKnown RBP3.24□□□□□ -1.89
FOXN3-213ENST00000556916 LYPD3O95274 346 aa3.24□□□□□ -1.89
FOXN3-213ENST00000556916 CLDN14O95500 239 aa3.24□□□□□ -1.89
FOXN3-213ENST00000556916 CYB5R3P00387 301 aaPredicted RBP3.24□□□□□ -1.89
FOXN3-213ENST00000556916 IFNA21P01568 189 aa3.24□□□□□ -1.89
FOXN3-213ENST00000556916 AMBPP02760 352 aa3.24□□□□□ -1.89
FOXN3-213ENST00000556916 CSN2P05814 226 aa3.24□□□□□ -1.89
FOXN3-213ENST00000556916 UMODP07911 640 aa3.24□□□□□ -1.89
FOXN3-213ENST00000556916 GUSBP08236 651 aa3.24□□□□□ -1.89
FOXN3-213ENST00000556916 SRP19P09132 144 aaKnown RBP3.24□□□□□ -1.89
FOXN3-213ENST00000556916 CST2P09228 141 aa3.24□□□□□ -1.89
FOXN3-213ENST00000556916 SLC35G6P0C7Q6 338 aa3.24□□□□□ -1.89
FOXN3-213ENST00000556916 IGHV4-30-4P0DP06 118 aa3.24□□□□□ -1.89
FOXN3-213ENST00000556916 SPTBP11277 2137 aa3.24□□□□□ -1.89
FOXN3-213ENST00000556916 F3P13726 295 aa3.24□□□□□ -1.89
FOXN3-213ENST00000556916 HIST1H1CP16403 213 aaKnown RBP3.24□□□□□ -1.89
FOXN3-213ENST00000556916 TMEM11P17152 192 aa3.24□□□□□ -1.89
FOXN3-213ENST00000556916 FUT1P19526 365 aa3.24□□□□□ -1.89
FOXN3-213ENST00000556916 HNF1AP20823 631 aa3.24□□□□□ -1.89
FOXN3-213ENST00000556916 BCKDHBP21953 392 aa3.24□□□□□ -1.89
FOXN3-213ENST00000556916 AK4P27144 223 aaPredicted RBP3.24□□□□□ -1.89
FOXN3-213ENST00000556916 EPHA8P29322 1005 aaPredicted RBP3.24□□□□□ -1.89
FOXN3-213ENST00000556916 OR10J1P30954 320 aa3.24□□□□□ -1.89
FOXN3-213ENST00000556916 CHRNA7P36544 502 aa3.24□□□□□ -1.89
FOXN3-213ENST00000556916 RPL4P36578 427 aaKnown RBP3.24□□□□□ -1.89
FOXN3-213ENST00000556916 SSR2P43308 183 aa3.24□□□□□ -1.89
FOXN3-213ENST00000556916 P2RY1P47900 373 aa3.24□□□□□ -1.89
FOXN3-213ENST00000556916 GABRA4P48169 554 aa3.24□□□□□ -1.89
FOXN3-213ENST00000556916 RND2P52198 227 aa3.24□□□□□ -1.89
FOXN3-213ENST00000556916 PDX1P52945 283 aa3.24□□□□□ -1.89
FOXN3-213ENST00000556916 SLC25A1P53007 311 aa3.24□□□□□ -1.89
FOXN3-213ENST00000556916 S100A10P60903 97 aa3.24□□□□□ -1.89
FOXN3-213ENST00000556916 REEP5Q00765 189 aa3.24□□□□□ -1.89
FOXN3-213ENST00000556916 PNRC1Q12796 327 aaPredicted RBP3.24□□□□□ -1.89
FOXN3-213ENST00000556916 IL15RAQ13261 267 aa3.24□□□□□ -1.89
FOXN3-213ENST00000556916 EIF2B1Q14232 305 aaKnown RBP3.24□□□□□ -1.89
FOXN3-213ENST00000556916 HERPUD1Q15011 391 aa3.24□□□□□ -1.89
FOXN3-213ENST00000556916 TAF9Q16594 264 aa3.24□□□□□ -1.89
FOXN3-213ENST00000556916 TMEM241Q24JQ0 296 aa3.24□□□□□ -1.89
FOXN3-213ENST00000556916 TMEM176BQ3YBM2 270 aaPredicted RBP3.24□□□□□ -1.89
FOXN3-213ENST00000556916 CHRFAM7AQ494W8 412 aa3.24□□□□□ -1.89
FOXN3-213ENST00000556916 ZNF672Q499Z4 452 aaPredicted RBP3.24□□□□□ -1.89
FOXN3-213ENST00000556916 COA6Q5JTJ3 125 aaKnown RBP3.24□□□□□ -1.89
FOXN3-213ENST00000556916 GPR157Q5UAW9 335 aa3.24□□□□□ -1.89
FOXN3-213ENST00000556916 C1orf189Q5VU69 101 aa3.24□□□□□ -1.89
FOXN3-213ENST00000556916 FBXW9Q5XUX1 488 aa3.24□□□□□ -1.89
FOXN3-213ENST00000556916 TPGS2Q68CL5 300 aa3.24□□□□□ -1.89
FOXN3-213ENST00000556916 LEMD1Q68G75 181 aa3.24□□□□□ -1.89
FOXN3-213ENST00000556916 TMEM220Q6QAJ8 160 aa3.24□□□□□ -1.89
FOXN3-213ENST00000556916 DPY19L2P2Q6ZN68 376 aa3.24□□□□□ -1.89
FOXN3-213ENST00000556916 ZNF705AQ6ZN79 300 aaPredicted RBP3.24□□□□□ -1.89
FOXN3-213ENST00000556916 SSX7Q7RTT5 188 aa3.24□□□□□ -1.89
FOXN3-213ENST00000556916 P4HA3Q7Z4N8 544 aa3.24□□□□□ -1.89
FOXN3-213ENST00000556916 C5orf24Q7Z6I8 188 aa3.24□□□□□ -1.89
FOXN3-213ENST00000556916 TRAPPC6BQ86SZ2 158 aa3.24□□□□□ -1.89
FOXN3-213ENST00000556916 HOGA1Q86XE5 327 aa3.24□□□□□ -1.89
FOXN3-213ENST00000556916 CDC20BQ86Y33 519 aa3.24□□□□□ -1.89
FOXN3-213ENST00000556916 PRSS58Q8IYP2 241 aa3.24□□□□□ -1.89
FOXN3-213ENST00000556916 ZNF619Q8N2I2 560 aa3.24□□□□□ -1.89
FOXN3-213ENST00000556916 SLC35G3Q8N808 338 aa3.24□□□□□ -1.89
FOXN3-213ENST00000556916 POC1AQ8NBT0 407 aa3.24□□□□□ -1.89
FOXN3-213ENST00000556916 ADAD2Q8NCV1 583 aaKnown RBP3.24□□□□□ -1.89
FOXN3-213ENST00000556916 ZNF740Q8NDX6 193 aa3.24□□□□□ -1.89
FOXN3-213ENST00000556916 CADM4Q8NFZ8 388 aa3.24□□□□□ -1.89
FOXN3-213ENST00000556916 OR51A2Q8NGJ7 313 aa3.24□□□□□ -1.89
FOXN3-213ENST00000556916 OR2L2Q8NH16 312 aa3.24□□□□□ -1.89
FOXN3-213ENST00000556916 OR51A7Q8NH64 312 aa3.24□□□□□ -1.89
FOXN3-213ENST00000556916 ZNF563Q8TA94 476 aa3.24□□□□□ -1.89
FOXN3-213ENST00000556916 MARCH1Q8TCQ1 289 aa3.24□□□□□ -1.89
FOXN3-213ENST00000556916 RNF128Q8TEB7 428 aa3.24□□□□□ -1.89
FOXN3-213ENST00000556916 AQP3Q92482 292 aa3.24□□□□□ -1.89
FOXN3-213ENST00000556916 GLYATL1Q969I3 302 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms