RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 TM6SF2Q9BZW4 377 aa2.93□□□□□ -1.94
PRPF39-210ENST00000556718 NAA50Q9GZZ1 169 aaKnown RBP2.93□□□□□ -1.94
PRPF39-210ENST00000556718 DCSTAMPQ9H295 470 aa2.93□□□□□ -1.94
PRPF39-210ENST00000556718 IFI27L2Q9H2X8 130 aa2.93□□□□□ -1.94
PRPF39-210ENST00000556718 UBE2ZQ9H832 354 aaPredicted RBP2.93□□□□□ -1.94
PRPF39-210ENST00000556718 C19orf12Q9NSK7 152 aa2.93□□□□□ -1.94
PRPF39-210ENST00000556718 IMP3Q9NV31 184 aaKnown RBP2.93□□□□□ -1.94
PRPF39-210ENST00000556718 TMEM216Q9P0N5 145 aa2.93□□□□□ -1.94
PRPF39-210ENST00000556718 MARCOQ9UEW3 520 aaPredicted RBP2.93□□□□□ -1.94
PRPF39-210ENST00000556718 C3orf18Q9UK00 162 aa2.93□□□□□ -1.94
PRPF39-210ENST00000556718 ARHGEF28Q8N1W1 1705 aaKnown RBP2.93□□□□□ -1.94
PRPF39-210ENST00000556718 MROH1Q8NDA8 1641 aa2.93□□□□□ -1.94
PRPF39-210ENST00000556718 CLTCQ00610 1675 aaKnown RBP2.92□□□□□ -1.94
PRPF39-210ENST00000556718 MED1Q15648 1581 aaPredicted RBP2.92□□□□□ -1.94
PRPF39-210ENST00000556718 ERCC6L2Q5T890 1561 aa2.92□□□□□ -1.94
PRPF39-210ENST00000556718 TRBV6-6A0A0A6YYG2 114 aa2.92□□□□□ -1.94
PRPF39-210ENST00000556718 IGHV3-64DA0A0J9YX35 117 aa2.92□□□□□ -1.94
PRPF39-210ENST00000556718 PINLYPA6NC86 204 aa2.92□□□□□ -1.94
PRPF39-210ENST00000556718 SLC22A20A6NK97 555 aa2.92□□□□□ -1.94
PRPF39-210ENST00000556718 NCBP2LA6PVI3 153 aaKnown RBP2.92□□□□□ -1.94
PRPF39-210ENST00000556718 INS-IGF2F8WCM5 200 aa2.92□□□□□ -1.94
PRPF39-210ENST00000556718 KDELR3O43731 214 aa2.92□□□□□ -1.94
PRPF39-210ENST00000556718 ZNF861PO60384 105 aa2.92□□□□□ -1.94
PRPF39-210ENST00000556718 IGLV2-23P01705 113 aa2.92□□□□□ -1.94
PRPF39-210ENST00000556718 PCCAP05165 728 aaPredicted RBP2.92□□□□□ -1.94
PRPF39-210ENST00000556718 OR56A5P0C7T3 313 aa2.92□□□□□ -1.94
PRPF39-210ENST00000556718 PRPS2P11908 318 aa2.92□□□□□ -1.94
PRPF39-210ENST00000556718 CD36P16671 472 aa2.92□□□□□ -1.94
PRPF39-210ENST00000556718 USF1P22415 310 aaPredicted RBP2.92□□□□□ -1.94
PRPF39-210ENST00000556718 PSMB9P28065 219 aa2.92□□□□□ -1.94
PRPF39-210ENST00000556718 HOXA6P31267 233 aa2.92□□□□□ -1.94
PRPF39-210ENST00000556718 CSNK1A1P48729 337 aa2.92□□□□□ -1.94
PRPF39-210ENST00000556718 LHX2P50458 406 aa2.92□□□□□ -1.94
PRPF39-210ENST00000556718 ZNF138P52744 262 aa2.92□□□□□ -1.94
PRPF39-210ENST00000556718 SPCS3P61009 180 aa2.92□□□□□ -1.94
PRPF39-210ENST00000556718 RAB5BP61020 215 aa2.92□□□□□ -1.94
PRPF39-210ENST00000556718 MGAT3Q09327 533 aa2.92□□□□□ -1.94
PRPF39-210ENST00000556718 BIKQ13323 160 aa2.92□□□□□ -1.94
PRPF39-210ENST00000556718 RGNQ15493 299 aa2.92□□□□□ -1.94
PRPF39-210ENST00000556718 UBE2SQ16763 222 aa2.92□□□□□ -1.94
PRPF39-210ENST00000556718 SYT6Q5T7P8 510 aaPredicted RBP2.92□□□□□ -1.94
PRPF39-210ENST00000556718 XAF1Q6GPH4 301 aa2.92□□□□□ -1.94
PRPF39-210ENST00000556718 SLC25A25Q6KCM7 469 aa2.92□□□□□ -1.94
PRPF39-210ENST00000556718 TMPRSS11AQ6ZMR5 421 aa2.92□□□□□ -1.94
PRPF39-210ENST00000556718 OR2W3Q7Z3T1 314 aa2.92□□□□□ -1.94
PRPF39-210ENST00000556718 GALNT10Q86SR1 603 aa2.92□□□□□ -1.94
PRPF39-210ENST00000556718 CBLN2Q8IUK8 224 aa2.92□□□□□ -1.94
PRPF39-210ENST00000556718 PCP2Q8IVA1 136 aa2.92□□□□□ -1.94
PRPF39-210ENST00000556718 YIPF7Q8N8F6 280 aa2.92□□□□□ -1.94
PRPF39-210ENST00000556718 DUSP18Q8NEJ0 188 aa2.92□□□□□ -1.94
PRPF39-210ENST00000556718 NOXO1Q8NFA2 376 aa2.92□□□□□ -1.94
PRPF39-210ENST00000556718 OR9Q1Q8NGQ5 310 aa2.92□□□□□ -1.94
PRPF39-210ENST00000556718 RPEQ96AT9 228 aa2.92□□□□□ -1.94
PRPF39-210ENST00000556718 DCPSQ96C86 337 aaKnown RBP2.92□□□□□ -1.94
PRPF39-210ENST00000556718 TM4SF18Q96CE8 201 aa2.92□□□□□ -1.94
PRPF39-210ENST00000556718 LRRC58Q96CX6 371 aa2.92□□□□□ -1.94
PRPF39-210ENST00000556718 YIPF6Q96EC8 236 aa2.92□□□□□ -1.94
PRPF39-210ENST00000556718 NARS2Q96I59 477 aaKnown RBP2.92□□□□□ -1.94
PRPF39-210ENST00000556718 RNF170Q96K19 258 aa2.92□□□□□ -1.94
PRPF39-210ENST00000556718 BMFQ96LC9 184 aa2.92□□□□□ -1.94
PRPF39-210ENST00000556718 PFDN5Q99471 154 aa2.92□□□□□ -1.94
PRPF39-210ENST00000556718 LXNQ9BS40 222 aa2.92□□□□□ -1.94
PRPF39-210ENST00000556718 MED18Q9BUE0 208 aa2.92□□□□□ -1.94
PRPF39-210ENST00000556718 BBS2Q9BXC9 721 aa2.92□□□□□ -1.94
PRPF39-210ENST00000556718 NXF2Q9GZY0 626 aaKnown RBP2.92□□□□□ -1.94
PRPF39-210ENST00000556718 ALX4Q9H161 411 aaPredicted RBP2.92□□□□□ -1.94
PRPF39-210ENST00000556718 MED28Q9H204 178 aa2.92□□□□□ -1.94
PRPF39-210ENST00000556718 MYOZ1Q9NP98 299 aaPredicted RBP2.92□□□□□ -1.94
PRPF39-210ENST00000556718 COA4Q9NYJ1 87 aa2.92□□□□□ -1.94
PRPF39-210ENST00000556718 PSG8Q9UQ74 426 aa2.92□□□□□ -1.94
PRPF39-210ENST00000556718 V9GYQ6 96 aa2.92□□□□□ -1.94
PRPF39-210ENST00000556718 PHRF1Q9P1Y6 1649 aaKnown RBP2.92□□□□□ -1.94
PRPF39-210ENST00000556718 MYH10P35580 1976 aa2.92□□□□□ -1.94
PRPF39-210ENST00000556718 MYO5AQ9Y4I1 1855 aaKnown RBP2.92□□□□□ -1.94
PRPF39-210ENST00000556718 RIC1Q4ADV7 1423 aa2.92□□□□□ -1.94
PRPF39-210ENST00000556718 NRKQ7Z2Y5 1582 aa2.91□□□□□ -1.94
PRPF39-210ENST00000556718 DLG5Q8TDM6 1919 aa2.91□□□□□ -1.94
PRPF39-210ENST00000556718 ZNF646O15015 1829 aaPredicted RBP2.91□□□□□ -1.94
PRPF39-210ENST00000556718 C4AP0C0L4 1744 aa2.91□□□□□ -1.94
PRPF39-210ENST00000556718 C4BP0C0L5 1744 aa2.91□□□□□ -1.94
PRPF39-210ENST00000556718 MYH11P35749 1972 aa2.91□□□□□ -1.94
PRPF39-210ENST00000556718 IGLV1-36A0A0B4J1U3 117 aa2.91□□□□□ -1.94
PRPF39-210ENST00000556718 IGHV3-66A0A0C4DH42 116 aa2.91□□□□□ -1.94
PRPF39-210ENST00000556718 A0A0G2JMP0 313 aa2.91□□□□□ -1.94
PRPF39-210ENST00000556718 TRAPPC13A5PLN9 417 aa2.91□□□□□ -1.94
PRPF39-210ENST00000556718 METTL15A6NJ78 407 aa2.91□□□□□ -1.94
PRPF39-210ENST00000556718 ZNF729A6NN14 1252 aaPredicted RBP2.91□□□□□ -1.94
PRPF39-210ENST00000556718 HACD1B0YJ81 288 aa2.91□□□□□ -1.94
PRPF39-210ENST00000556718 G3V2T6 193 aa2.91□□□□□ -1.94
PRPF39-210ENST00000556718 H3BN98 237 aa2.91□□□□□ -1.94
PRPF39-210ENST00000556718 GABRPO00591 440 aa2.91□□□□□ -1.94
PRPF39-210ENST00000556718 MRASO14807 208 aa2.91□□□□□ -1.94
PRPF39-210ENST00000556718 PHYHO14832 338 aa2.91□□□□□ -1.94
PRPF39-210ENST00000556718 UBDO15205 165 aa2.91□□□□□ -1.94
PRPF39-210ENST00000556718 CD5LO43866 347 aa2.91□□□□□ -1.94
PRPF39-210ENST00000556718 PLIN3O60664 434 aa2.91□□□□□ -1.94
PRPF39-210ENST00000556718 EIF1BO60739 113 aaKnown RBP2.91□□□□□ -1.94
PRPF39-210ENST00000556718 BANF1O75531 89 aa2.91□□□□□ -1.94
PRPF39-210ENST00000556718 PIAS1O75925 651 aa2.91□□□□□ -1.94
PRPF39-210ENST00000556718 IFNA10P01566 189 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms