RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 TMED7Q9Y3B3 224 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 PCSK5Q92824 1860 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 DOCK10Q96BY6 2186 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 OR5H15A6NDH6 313 aa4.46□□□□□ -1.69
TMEM260-210ENST00000556422 WIPF3A6NGB9 483 aa4.46□□□□□ -1.69
TMEM260-210ENST00000556422 OR5H1A6NKK0 313 aa4.46□□□□□ -1.69
TMEM260-210ENST00000556422 RAB29O14966 203 aa4.46□□□□□ -1.69
TMEM260-210ENST00000556422 FZD7O75084 574 aa4.46□□□□□ -1.69
TMEM260-210ENST00000556422 FARS2O95363 451 aaKnown RBP4.46□□□□□ -1.69
TMEM260-210ENST00000556422 SNRPBP14678 240 aaKnown RBP4.46□□□□□ -1.69
TMEM260-210ENST00000556422 ALOX5APP20292 161 aa4.46□□□□□ -1.69
TMEM260-210ENST00000556422 HOXA5P20719 270 aa4.46□□□□□ -1.69
TMEM260-210ENST00000556422 EDNRAP25101 427 aa4.46□□□□□ -1.69
TMEM260-210ENST00000556422 RBMS1P29558 406 aaKnown RBP4.46□□□□□ -1.69
TMEM260-210ENST00000556422 UQCRFS1P47985 274 aa4.46□□□□□ -1.69
TMEM260-210ENST00000556422 POLR2HP52434 150 aaKnown RBP4.46□□□□□ -1.69
TMEM260-210ENST00000556422 DLX5P56178 289 aa4.46□□□□□ -1.69
TMEM260-210ENST00000556422 RPL32P62910 135 aaKnown RBP4.46□□□□□ -1.69
TMEM260-210ENST00000556422 TLE3Q04726 772 aa4.46□□□□□ -1.69
TMEM260-210ENST00000556422 IKZF1Q13422 519 aa4.46□□□□□ -1.69
TMEM260-210ENST00000556422 TNXAQ16473 311 aa4.46□□□□□ -1.69
TMEM260-210ENST00000556422 C1orf140Q5VVS0 124 aa4.46□□□□□ -1.69
TMEM260-210ENST00000556422 ESPNLQ6ZVH7 1005 aa4.46□□□□□ -1.69
TMEM260-210ENST00000556422 OVCH1Q7RTY7 1134 aa4.46□□□□□ -1.69
TMEM260-210ENST00000556422 NECAP1Q8NC96 275 aa4.46□□□□□ -1.69
TMEM260-210ENST00000556422 DUSP18Q8NEJ0 188 aa4.46□□□□□ -1.69
TMEM260-210ENST00000556422 OR1K1Q8NGR3 316 aa4.46□□□□□ -1.69
TMEM260-210ENST00000556422 HRH4Q9H3N8 390 aa4.46□□□□□ -1.69
TMEM260-210ENST00000556422 MSL2Q9HCI7 577 aa4.46□□□□□ -1.69
TMEM260-210ENST00000556422 NOX4Q9NPH5 578 aa4.46□□□□□ -1.69
TMEM260-210ENST00000556422 RPS10P5Q9NQ39 176 aa4.46□□□□□ -1.69
TMEM260-210ENST00000556422 RBFOX1Q9NWB1 397 aaKnown RBP4.46□□□□□ -1.69
TMEM260-210ENST00000556422 B3GALT1Q9Y5Z6 326 aa4.46□□□□□ -1.69
TMEM260-210ENST00000556422 IGLV1-36A0A0B4J1U3 117 aa4.46□□□□□ -1.7
TMEM260-210ENST00000556422 ANXA2P2A6NMY6 339 aa4.46□□□□□ -1.7
TMEM260-210ENST00000556422 A8MVM7 634 aa4.46□□□□□ -1.7
TMEM260-210ENST00000556422 ETV2O00321 342 aaPredicted RBP4.46□□□□□ -1.7
TMEM260-210ENST00000556422 PLPP3O14495 311 aa4.46□□□□□ -1.7
TMEM260-210ENST00000556422 EFNA2O43921 213 aa4.46□□□□□ -1.7
TMEM260-210ENST00000556422 S1PR2O95136 353 aa4.46□□□□□ -1.7
TMEM260-210ENST00000556422 IGHMP01871 453 aa4.46□□□□□ -1.7
TMEM260-210ENST00000556422 GP1BBP13224 206 aa4.46□□□□□ -1.7
TMEM260-210ENST00000556422 FOLR2P14207 255 aa4.46□□□□□ -1.7
TMEM260-210ENST00000556422 CTLA4P16410 223 aa4.46□□□□□ -1.7
TMEM260-210ENST00000556422 ANOS1P23352 680 aa4.46□□□□□ -1.7
TMEM260-210ENST00000556422 DCDP81605 110 aaKnown RBP4.46□□□□□ -1.7
TMEM260-210ENST00000556422 SSBP2P81877 361 aaPredicted RBP4.46□□□□□ -1.7
TMEM260-210ENST00000556422 GABRA6Q16445 453 aa4.46□□□□□ -1.7
TMEM260-210ENST00000556422 ELFN2Q5R3F8 820 aa4.46□□□□□ -1.7
TMEM260-210ENST00000556422 NUFIP2Q7Z417 695 aaKnown RBP4.46□□□□□ -1.7
TMEM260-210ENST00000556422 LRRTM1Q86UE6 522 aa4.46□□□□□ -1.7
TMEM260-210ENST00000556422 EID2Q8N6I1 236 aa4.46□□□□□ -1.7
TMEM260-210ENST00000556422 OR51A4Q8NGJ6 313 aa4.46□□□□□ -1.7
TMEM260-210ENST00000556422 OR10AC1Q8NH08 325 aa4.46□□□□□ -1.7
TMEM260-210ENST00000556422 ZNF417Q8TAU3 575 aa4.46□□□□□ -1.7
TMEM260-210ENST00000556422 ZNF587Q96SQ5 575 aaPredicted RBP4.46□□□□□ -1.7
TMEM260-210ENST00000556422 SIGMAR1Q99720 223 aa4.46□□□□□ -1.7
TMEM260-210ENST00000556422 METTL17Q9H7H0 456 aaPredicted RBP4.46□□□□□ -1.7
TMEM260-210ENST00000556422 B3GAT1Q9P2W7 334 aa4.46□□□□□ -1.7
TMEM260-210ENST00000556422 HSPB7Q9UBY9 170 aa4.46□□□□□ -1.7
TMEM260-210ENST00000556422 ZNF629Q9UEG4 869 aaPredicted RBP4.46□□□□□ -1.7
TMEM260-210ENST00000556422 RARRES3Q9UL19 164 aa4.46□□□□□ -1.7
TMEM260-210ENST00000556422 AK6Q9Y3D8 172 aaKnown RBP4.46□□□□□ -1.7
TMEM260-210ENST00000556422 LYRM1O43325 122 aa4.46□□□□□ -1.7
TMEM260-210ENST00000556422 MPC2O95563 127 aa4.46□□□□□ -1.7
TMEM260-210ENST00000556422 LIPCP11150 499 aa4.46□□□□□ -1.7
TMEM260-210ENST00000556422 ARSBP15848 533 aa4.46□□□□□ -1.7
TMEM260-210ENST00000556422 MAP2K3P46734 347 aa4.46□□□□□ -1.7
TMEM260-210ENST00000556422 RPL27P61353 136 aaKnown RBP4.46□□□□□ -1.7
TMEM260-210ENST00000556422 RPS16P62249 146 aaKnown RBP4.46□□□□□ -1.7
TMEM260-210ENST00000556422 LCN2P80188 198 aa4.46□□□□□ -1.7
TMEM260-210ENST00000556422 SLC36A2Q495M3 483 aa4.46□□□□□ -1.7
TMEM260-210ENST00000556422 NSUN5P2Q63ZY6 315 aa4.46□□□□□ -1.7
TMEM260-210ENST00000556422 ZNF664Q8N3J9 261 aa4.46□□□□□ -1.7
TMEM260-210ENST00000556422 OR13G1Q8NGZ3 307 aa4.46□□□□□ -1.7
TMEM260-210ENST00000556422 OR5R1Q8NH85 324 aa4.46□□□□□ -1.7
TMEM260-210ENST00000556422 OTOSQ8NHW6 89 aa4.46□□□□□ -1.7
TMEM260-210ENST00000556422 RNASEH2CQ8TDP1 164 aaKnown RBP4.46□□□□□ -1.7
TMEM260-210ENST00000556422 SLC2A8Q9NY64 477 aa4.46□□□□□ -1.7
TMEM260-210ENST00000556422 LPAR3Q9UBY5 353 aa4.46□□□□□ -1.7
TMEM260-210ENST00000556422 TRBV5-5A0A0J9YX44 114 aa4.46□□□□□ -1.7
TMEM260-210ENST00000556422 ANKRD20A5PA0PJZ0 165 aa4.46□□□□□ -1.7
TMEM260-210ENST00000556422 OR4C45A6NMZ5 311 aa4.46□□□□□ -1.7
TMEM260-210ENST00000556422 MS4A18H0YCH9 400 aa4.46□□□□□ -1.7
TMEM260-210ENST00000556422 SLC17A3O00476 420 aa4.46□□□□□ -1.7
TMEM260-210ENST00000556422 NTN3O00634 580 aaPredicted RBP4.46□□□□□ -1.7
TMEM260-210ENST00000556422 DNPH1O43598 174 aa4.46□□□□□ -1.7
TMEM260-210ENST00000556422 ARL6IP5O75915 188 aa4.46□□□□□ -1.7
TMEM260-210ENST00000556422 ZNF432O94892 652 aa4.46□□□□□ -1.7
TMEM260-210ENST00000556422 SSTR5P35346 364 aa4.46□□□□□ -1.7
TMEM260-210ENST00000556422 ZP1P60852 638 aa4.46□□□□□ -1.7
TMEM260-210ENST00000556422 AKR1C1Q04828 323 aa4.46□□□□□ -1.7
TMEM260-210ENST00000556422 MELKQ14680 651 aa4.46□□□□□ -1.7
TMEM260-210ENST00000556422 MS4A18Q3C1V0 323 aa4.46□□□□□ -1.7
TMEM260-210ENST00000556422 FBLN7Q53RD9 439 aa4.46□□□□□ -1.7
TMEM260-210ENST00000556422 C9orf135Q5VTT2 229 aa4.46□□□□□ -1.7
TMEM260-210ENST00000556422 FADS6Q8N9I5 356 aa4.46□□□□□ -1.7
TMEM260-210ENST00000556422 OR2T35Q8NGX2 323 aa4.46□□□□□ -1.7
TMEM260-210ENST00000556422 OR6N2Q8NGY6 317 aa4.46□□□□□ -1.7
TMEM260-210ENST00000556422 LYPD6BQ8NI32 183 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms