RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 SH3GL1Q99961 368 aa3.81□□□□□ -1.8
ATXN3-239ENST00000556315 RTL8AQ9BWD3 113 aa3.81□□□□□ -1.8
ATXN3-239ENST00000556315 SP140LQ9H930 580 aa3.81□□□□□ -1.8
ATXN3-239ENST00000556315 ELL3Q9HB65 397 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-239ENST00000556315 C19orf12Q9NSK7 152 aa3.81□□□□□ -1.8
ATXN3-239ENST00000556315 PPP1R14DQ9NXH3 145 aa3.81□□□□□ -1.8
ATXN3-239ENST00000556315 NDE1Q9NXR1 346 aa3.81□□□□□ -1.8
ATXN3-239ENST00000556315 TAS2R1Q9NYW7 299 aa3.81□□□□□ -1.8
ATXN3-239ENST00000556315 MSRB1Q9NZV6 116 aa3.81□□□□□ -1.8
ATXN3-239ENST00000556315 HSF4Q9ULV5 492 aa3.81□□□□□ -1.8
ATXN3-239ENST00000556315 SIGLEC7Q9Y286 467 aa3.81□□□□□ -1.8
ATXN3-239ENST00000556315 TMEM5Q9Y2B1 443 aa3.81□□□□□ -1.8
ATXN3-239ENST00000556315 RHBDD3Q9Y3P4 386 aa3.81□□□□□ -1.8
ATXN3-239ENST00000556315 N6AMT1Q9Y5N5 214 aa3.81□□□□□ -1.8
ATXN3-239ENST00000556315 MPC1Q9Y5U8 109 aa3.81□□□□□ -1.8
ATXN3-239ENST00000556315 MINOS1-NBL1R4GNA1 71 aa3.81□□□□□ -1.8
ATXN3-239ENST00000556315 TRBV5-7A0A0A0MS05 114 aa3.8□□□□□ -1.8
ATXN3-239ENST00000556315 A0A0G2JND7 137 aa3.8□□□□□ -1.8
ATXN3-239ENST00000556315 SMIM31A0A1B0GVY4 71 aa3.8□□□□□ -1.8
ATXN3-239ENST00000556315 PSMB11A5LHX3 300 aa3.8□□□□□ -1.8
ATXN3-239ENST00000556315 GAGE12JA6NER3 117 aa3.8□□□□□ -1.8
ATXN3-239ENST00000556315 GAGE10A6NGK3 116 aa3.8□□□□□ -1.8
ATXN3-239ENST00000556315 C17orf98A8MV24 154 aa3.8□□□□□ -1.8
ATXN3-239ENST00000556315 ODF3BA8MYP8 253 aa3.8□□□□□ -1.8
ATXN3-239ENST00000556315 M0QZK8 103 aa3.8□□□□□ -1.8
ATXN3-239ENST00000556315 CCL24O00175 119 aa3.8□□□□□ -1.8
ATXN3-239ENST00000556315 FFAR1O14842 300 aa3.8□□□□□ -1.8
ATXN3-239ENST00000556315 ARPC3O15145 178 aa3.8□□□□□ -1.8
ATXN3-239ENST00000556315 MTRF1O75570 445 aaKnown RBP3.8□□□□□ -1.8
ATXN3-239ENST00000556315 IL1AP01583 271 aa3.8□□□□□ -1.8
ATXN3-239ENST00000556315 PGA5P0DJD9 388 aa3.8□□□□□ -1.8
ATXN3-239ENST00000556315 CCL3L1P16619 93 aa3.8□□□□□ -1.8
ATXN3-239ENST00000556315 PRDX2P32119 198 aa3.8□□□□□ -1.8
ATXN3-239ENST00000556315 BRS3P32247 399 aa3.8□□□□□ -1.8
ATXN3-239ENST00000556315 KDELR2P33947 212 aa3.8□□□□□ -1.8
ATXN3-239ENST00000556315 YAP1P46937 504 aaKnown RBP3.8□□□□□ -1.8
ATXN3-239ENST00000556315 HSPA13P48723 471 aa3.8□□□□□ -1.8
ATXN3-239ENST00000556315 PRKXP51817 358 aa3.8□□□□□ -1.8
ATXN3-239ENST00000556315 RPP30P78346 268 aaKnown RBP3.8□□□□□ -1.8
ATXN3-239ENST00000556315 IL18R1Q13478 541 aa3.8□□□□□ -1.8
ATXN3-239ENST00000556315 KLF9Q13886 244 aaPredicted RBP3.8□□□□□ -1.8
ATXN3-239ENST00000556315 CYLC2Q14093 348 aaPredicted RBP3.8□□□□□ -1.8
ATXN3-239ENST00000556315 BAK1Q16611 211 aa3.8□□□□□ -1.8
ATXN3-239ENST00000556315 ABCA11PQ4W5N1 156 aa3.8□□□□□ -1.8
ATXN3-239ENST00000556315 LDLRAD2Q5SZI1 272 aa3.8□□□□□ -1.8
ATXN3-239ENST00000556315 LCN8Q6JVE9 175 aa3.8□□□□□ -1.8
ATXN3-239ENST00000556315 NANOGP8Q6NSW7 305 aa3.8□□□□□ -1.8
ATXN3-239ENST00000556315 ZFP1Q6P2D0 407 aa3.8□□□□□ -1.8
ATXN3-239ENST00000556315 PLBD1Q6P4A8 553 aa3.8□□□□□ -1.8
ATXN3-239ENST00000556315 ERICH5Q6P6B1 374 aa3.8□□□□□ -1.8
ATXN3-239ENST00000556315 ADAMTSL5Q6ZMM2 481 aa3.8□□□□□ -1.8
ATXN3-239ENST00000556315 OR2W3Q7Z3T1 314 aa3.8□□□□□ -1.8
ATXN3-239ENST00000556315 ZNF695Q8IW36 515 aa3.8□□□□□ -1.8
ATXN3-239ENST00000556315 ZNF561Q8N587 486 aa3.8□□□□□ -1.8
ATXN3-239ENST00000556315 COMMD1Q8N668 190 aa3.8□□□□□ -1.8
ATXN3-239ENST00000556315 DNAAF1Q8NEP3 725 aa3.8□□□□□ -1.8
ATXN3-239ENST00000556315 OR4M1Q8NGD0 313 aa3.8□□□□□ -1.8
ATXN3-239ENST00000556315 OR4K13Q8NH42 304 aa3.8□□□□□ -1.8
ATXN3-239ENST00000556315 OR5P3Q8WZ94 311 aa3.8□□□□□ -1.8
ATXN3-239ENST00000556315 REEP6Q96HR9 211 aa3.8□□□□□ -1.8
ATXN3-239ENST00000556315 TPD52L3Q96J77 140 aa3.8□□□□□ -1.8
ATXN3-239ENST00000556315 RNF170Q96K19 258 aa3.8□□□□□ -1.8
ATXN3-239ENST00000556315 NMNAT3Q96T66 252 aa3.8□□□□□ -1.8
ATXN3-239ENST00000556315 TSC22D3Q99576 134 aa3.8□□□□□ -1.8
ATXN3-239ENST00000556315 FUZQ9BT04 418 aa3.8□□□□□ -1.8
ATXN3-239ENST00000556315 COPS4Q9BT78 406 aa3.8□□□□□ -1.8
ATXN3-239ENST00000556315 PAPOLGQ9BWT3 736 aaKnown RBP3.8□□□□□ -1.8
ATXN3-239ENST00000556315 Q9H521 79 aa3.8□□□□□ -1.8
ATXN3-239ENST00000556315 ANKRD19PQ9H560 264 aa3.8□□□□□ -1.8
ATXN3-239ENST00000556315 PPP1R3EQ9H7J1 279 aa3.8□□□□□ -1.8
ATXN3-239ENST00000556315 VCX3AQ9NNX9 186 aa3.8□□□□□ -1.8
ATXN3-239ENST00000556315 ABCB9Q9NP78 766 aa3.8□□□□□ -1.8
ATXN3-239ENST00000556315 RPRD1BQ9NQG5 326 aaKnown RBP3.8□□□□□ -1.8
ATXN3-239ENST00000556315 CENPMQ9NSP4 180 aa3.8□□□□□ -1.8
ATXN3-239ENST00000556315 MRPL22Q9NWU5 206 aaKnown RBP3.8□□□□□ -1.8
ATXN3-239ENST00000556315 RASL12Q9NYN1 266 aa3.8□□□□□ -1.8
ATXN3-239ENST00000556315 RHCGQ9UBD6 479 aa3.8□□□□□ -1.8
ATXN3-239ENST00000556315 ZNF222Q9UK12 451 aa3.8□□□□□ -1.8
ATXN3-239ENST00000556315 ZNF256Q9Y2P7 627 aaPredicted RBP3.8□□□□□ -1.8
ATXN3-239ENST00000556315 HILPDAQ9Y5L2 63 aa3.8□□□□□ -1.8
ATXN3-239ENST00000556315 RFPL4AA6NLU0 287 aa3.79□□□□□ -1.8
ATXN3-239ENST00000556315 ZNF850A8MQ14 1090 aa3.79□□□□□ -1.8
ATXN3-239ENST00000556315 SEC14L6B5MCN3 397 aa3.79□□□□□ -1.8
ATXN3-239ENST00000556315 RFPL4AL1F8VTS6 287 aa3.79□□□□□ -1.8
ATXN3-239ENST00000556315 H0YJX3 145 aa3.79□□□□□ -1.8
ATXN3-239ENST00000556315 SLC1A7O00341 560 aa3.79□□□□□ -1.8
ATXN3-239ENST00000556315 TSPAN4O14817 238 aa3.79□□□□□ -1.8
ATXN3-239ENST00000556315 CASQ2O14958 399 aaPredicted RBP3.79□□□□□ -1.8
ATXN3-239ENST00000556315 IDH3BO43837 385 aa3.79□□□□□ -1.8
ATXN3-239ENST00000556315 OR2F2O95006 317 aa3.79□□□□□ -1.8
ATXN3-239ENST00000556315 CST4P01036 141 aa3.79□□□□□ -1.8
ATXN3-239ENST00000556315 APOC1P02654 83 aa3.79□□□□□ -1.8
ATXN3-239ENST00000556315 RBP4P02753 201 aa3.79□□□□□ -1.8
ATXN3-239ENST00000556315 ZNF728P0DKX0 622 aa3.79□□□□□ -1.8
ATXN3-239ENST00000556315 IGHV1-8P0DP01 117 aa3.79□□□□□ -1.8
ATXN3-239ENST00000556315 SLC2A1P11166 492 aa3.79□□□□□ -1.8
ATXN3-239ENST00000556315 HIST1H1CP16403 213 aaKnown RBP3.79□□□□□ -1.8
ATXN3-239ENST00000556315 ANOS1P23352 680 aa3.79□□□□□ -1.8
ATXN3-239ENST00000556315 DCTDP32321 178 aa3.79□□□□□ -1.8
ATXN3-239ENST00000556315 SLC15A1P46059 708 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms