RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 CD3GP09693 182 aa9.41□□□□□ -0.9
SHMT2-220ENST00000555634 RPS2P15880 293 aaKnown RBP9.41□□□□□ -0.9
SHMT2-220ENST00000555634 HIST1H1DP16402 221 aaKnown RBP9.41□□□□□ -0.9
SHMT2-220ENST00000555634 TNFSF8P32971 234 aa9.41□□□□□ -0.9
SHMT2-220ENST00000555634 ACTBP60709 375 aa9.41□□□□□ -0.9
SHMT2-220ENST00000555634 ACTG1P63261 375 aa9.41□□□□□ -0.9
SHMT2-220ENST00000555634 PYDC2Q56P42 97 aa9.41□□□□□ -0.9
SHMT2-220ENST00000555634 LRRC10Q5BKY1 277 aa9.41□□□□□ -0.9
SHMT2-220ENST00000555634 TEX36Q5VZQ5 186 aa9.41□□□□□ -0.9
SHMT2-220ENST00000555634 SFRP4Q6FHJ7 346 aaPredicted RBP9.41□□□□□ -0.9
SHMT2-220ENST00000555634 CRIP3Q6Q6R5 217 aa9.41□□□□□ -0.9
SHMT2-220ENST00000555634 DCDC5Q6ZRR9 648 aa9.41□□□□□ -0.9
SHMT2-220ENST00000555634 Q6ZTK2 550 aa9.41□□□□□ -0.9
SHMT2-220ENST00000555634 GDPD3Q7L5L3 318 aa9.41□□□□□ -0.9
SHMT2-220ENST00000555634 RNF144BQ7Z419 303 aa9.41□□□□□ -0.9
SHMT2-220ENST00000555634 C11orf53Q8IXP5 236 aa9.41□□□□□ -0.9
SHMT2-220ENST00000555634 LRRC75A-AS1Q8N1F1 130 aa9.41□□□□□ -0.9
SHMT2-220ENST00000555634 OR4M1Q8NGD0 313 aa9.41□□□□□ -0.9
SHMT2-220ENST00000555634 NICN1Q9BSH3 213 aa9.41□□□□□ -0.9
SHMT2-220ENST00000555634 WDR13Q9H1Z4 485 aa9.41□□□□□ -0.9
SHMT2-220ENST00000555634 RAB9BQ9NP90 201 aa9.41□□□□□ -0.9
SHMT2-220ENST00000555634 ZNF701Q9NV72 531 aaPredicted RBP9.41□□□□□ -0.9
SHMT2-220ENST00000555634 HSF4Q9ULV5 492 aa9.41□□□□□ -0.9
SHMT2-220ENST00000555634 RFPL4AA6NLU0 287 aa9.4□□□□□ -0.9
SHMT2-220ENST00000555634 RFPL4AL1F8VTS6 287 aa9.4□□□□□ -0.9
SHMT2-220ENST00000555634 HSPB6O14558 160 aa9.4□□□□□ -0.9
SHMT2-220ENST00000555634 NDUFB3O43676 98 aa9.4□□□□□ -0.9
SHMT2-220ENST00000555634 CA11O75493 328 aa9.4□□□□□ -0.9
SHMT2-220ENST00000555634 RP2O75695 350 aa9.4□□□□□ -0.9
SHMT2-220ENST00000555634 OR2H2O95918 312 aa9.4□□□□□ -0.9
SHMT2-220ENST00000555634 IGHV4-39P01824 125 aa9.4□□□□□ -0.9
SHMT2-220ENST00000555634 PAX1P15863 534 aa9.4□□□□□ -0.9
SHMT2-220ENST00000555634 EGR1P18146 543 aa9.4□□□□□ -0.9
SHMT2-220ENST00000555634 PRDX2P32119 198 aa9.4□□□□□ -0.9
SHMT2-220ENST00000555634 CBX5P45973 191 aa9.4□□□□□ -0.9
SHMT2-220ENST00000555634 EFNB2P52799 333 aa9.4□□□□□ -0.9
SHMT2-220ENST00000555634 TAS2R20P59543 309 aa9.4□□□□□ -0.9
SHMT2-220ENST00000555634 PNLIPRP3Q17RR3 467 aa9.4□□□□□ -0.9
SHMT2-220ENST00000555634 TMEM155Q4W5P6 130 aa9.4□□□□□ -0.9
SHMT2-220ENST00000555634 TRIQKQ629K1 86 aa9.4□□□□□ -0.9
SHMT2-220ENST00000555634 STUMQ69YW2 141 aa9.4□□□□□ -0.9
SHMT2-220ENST00000555634 SNX29P2Q8IUI4 249 aa9.4□□□□□ -0.9
SHMT2-220ENST00000555634 FAM89BQ8N5H3 189 aa9.4□□□□□ -0.9
SHMT2-220ENST00000555634 DEFB108BQ8NET1 73 aa9.4□□□□□ -0.9
SHMT2-220ENST00000555634 TMEM185AQ8NFB2 350 aa9.4□□□□□ -0.9
SHMT2-220ENST00000555634 OR8B3Q8NGG8 313 aa9.4□□□□□ -0.9
SHMT2-220ENST00000555634 OR5D13Q8NGL4 314 aa9.4□□□□□ -0.9
SHMT2-220ENST00000555634 FCAMRQ8WWV6 532 aa9.4□□□□□ -0.9
SHMT2-220ENST00000555634 YIPF5Q969M3 257 aa9.4□□□□□ -0.9
SHMT2-220ENST00000555634 RAB39BQ96DA2 213 aa9.4□□□□□ -0.9
SHMT2-220ENST00000555634 OR8B2Q96RD0 313 aa9.4□□□□□ -0.9
SHMT2-220ENST00000555634 DPCDQ9BVM2 203 aaPredicted RBP9.4□□□□□ -0.9
SHMT2-220ENST00000555634 FAM234AQ9H0X4 552 aa9.4□□□□□ -0.9
SHMT2-220ENST00000555634 MIXL1Q9H2W2 232 aa9.4□□□□□ -0.9
SHMT2-220ENST00000555634 RIMS4Q9H426 269 aaPredicted RBP9.4□□□□□ -0.9
SHMT2-220ENST00000555634 SEBOXQ9HB31 216 aaPredicted RBP9.4□□□□□ -0.9
SHMT2-220ENST00000555634 SCPEP1Q9HB40 452 aa9.4□□□□□ -0.9
SHMT2-220ENST00000555634 C12orf4Q9NQ89 552 aa9.4□□□□□ -0.9
SHMT2-220ENST00000555634 LPAR3Q9UBY5 353 aa9.4□□□□□ -0.9
SHMT2-220ENST00000555634 MIOXQ9UGB7 285 aa9.4□□□□□ -0.9
SHMT2-220ENST00000555634 MGAT4AQ9UM21 535 aa9.4□□□□□ -0.9
SHMT2-220ENST00000555634 CACNG2Q9Y698 323 aa9.4□□□□□ -0.9
SHMT2-220ENST00000555634 F8VVB4 439 aa9.39□□□□□ -0.91
SHMT2-220ENST00000555634 F8VWA3 439 aa9.39□□□□□ -0.91
SHMT2-220ENST00000555634 ADAM20O43506 726 aa9.39□□□□□ -0.91
SHMT2-220ENST00000555634 GYPAP02724 150 aa9.39□□□□□ -0.91
SHMT2-220ENST00000555634 LPLP06858 475 aa9.39□□□□□ -0.91
SHMT2-220ENST00000555634 PSG2P11465 335 aa9.39□□□□□ -0.91
SHMT2-220ENST00000555634 CHATP28329 748 aa9.39□□□□□ -0.91
SHMT2-220ENST00000555634 DUSP1P28562 367 aa9.39□□□□□ -0.91
SHMT2-220ENST00000555634 PRSS3P35030 304 aa9.39□□□□□ -0.91
SHMT2-220ENST00000555634 PMELP40967 661 aa9.39□□□□□ -0.91
SHMT2-220ENST00000555634 ETV6P41212 452 aa9.39□□□□□ -0.91
SHMT2-220ENST00000555634 AP3S2P59780 193 aa9.39□□□□□ -0.91
SHMT2-220ENST00000555634 COL10A1Q03692 680 aa9.39□□□□□ -0.91
SHMT2-220ENST00000555634 GRK1Q15835 563 aa9.39□□□□□ -0.91
SHMT2-220ENST00000555634 DEFB113Q30KQ7 82 aa9.39□□□□□ -0.91
SHMT2-220ENST00000555634 SPRNQ5BIV9 151 aa9.39□□□□□ -0.91
SHMT2-220ENST00000555634 MOB1BQ7L9L4 216 aa9.39□□□□□ -0.91
SHMT2-220ENST00000555634 IZUMO1Q8IYV9 350 aa9.39□□□□□ -0.91
SHMT2-220ENST00000555634 ZNF525Q8N782 197 aa9.39□□□□□ -0.91
SHMT2-220ENST00000555634 SUMF2Q8NBJ7 301 aa9.39□□□□□ -0.91
SHMT2-220ENST00000555634 MBD6Q96DN6 1003 aa9.39□□□□□ -0.91
SHMT2-220ENST00000555634 ARHGAP5-AS1Q96IT6 56 aa9.39□□□□□ -0.91
SHMT2-220ENST00000555634 CMSS1Q9BQ75 279 aaKnown RBP9.39□□□□□ -0.91
SHMT2-220ENST00000555634 ETAA1Q9NY74 926 aa9.39□□□□□ -0.91
SHMT2-220ENST00000555634 IL36RNQ9UBH0 155 aa9.39□□□□□ -0.91
SHMT2-220ENST00000555634 A0A1W2PPH5 198 aa9.38□□□□□ -0.91
SHMT2-220ENST00000555634 TMEM30CPA0ZSE6 113 aa9.38□□□□□ -0.91
SHMT2-220ENST00000555634 TMEM235A6NFC5 223 aa9.38□□□□□ -0.91
SHMT2-220ENST00000555634 LYNX1G3V0Z9 82 aa9.38□□□□□ -0.91
SHMT2-220ENST00000555634 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.38□□□□□ -0.91
SHMT2-220ENST00000555634 RAB27BO00194 218 aa9.38□□□□□ -0.91
SHMT2-220ENST00000555634 SULT1C2O00338 296 aa9.38□□□□□ -0.91
SHMT2-220ENST00000555634 SLC33A1O00400 549 aaPredicted RBP9.38□□□□□ -0.91
SHMT2-220ENST00000555634 MGST3O14880 152 aa9.38□□□□□ -0.91
SHMT2-220ENST00000555634 GPR37O15354 613 aa9.38□□□□□ -0.91
SHMT2-220ENST00000555634 SOCS1O15524 211 aa9.38□□□□□ -0.91
SHMT2-220ENST00000555634 LY6HO94772 140 aa9.38□□□□□ -0.91
SHMT2-220ENST00000555634 ZNF205O95201 554 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms