RNA–Protein interactions for RNA: ENST00000555550.1

SCFD1-216, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-216ENST00000555550 TP53I11O14683 189 aa0.93□□□□□ -2.26
SCFD1-216ENST00000555550 HSBP1O75506 76 aa0.93□□□□□ -2.26
SCFD1-216ENST00000555550 HLA-AP01891 365 aaKnown RBP0.93□□□□□ -2.26
SCFD1-216ENST00000555550 OPN1SWP03999 348 aa0.93□□□□□ -2.26
SCFD1-216ENST00000555550 IMPA1P29218 277 aa0.93□□□□□ -2.26
SCFD1-216ENST00000555550 HADHBP55084 474 aaKnown RBP0.93□□□□□ -2.26
SCFD1-216ENST00000555550 SSX1Q16384 188 aa0.93□□□□□ -2.26
SCFD1-216ENST00000555550 PYCR3Q53H96 274 aa0.93□□□□□ -2.26
SCFD1-216ENST00000555550 TTC32Q5I0X7 151 aa0.93□□□□□ -2.26
SCFD1-216ENST00000555550 MLIPQ5VWP3 458 aa0.93□□□□□ -2.26
SCFD1-216ENST00000555550 SLC25A25Q6KCM7 469 aa0.93□□□□□ -2.26
SCFD1-216ENST00000555550 ZNF767PQ75MW2 155 aa0.93□□□□□ -2.26
SCFD1-216ENST00000555550 SLC35D2Q76EJ3 337 aa0.93□□□□□ -2.26
SCFD1-216ENST00000555550 OR2W3Q7Z3T1 314 aa0.93□□□□□ -2.26
SCFD1-216ENST00000555550 VTCN1Q7Z7D3 282 aa0.93□□□□□ -2.26
SCFD1-216ENST00000555550 INO80EQ8NBZ0 244 aaPredicted RBP0.93□□□□□ -2.26
SCFD1-216ENST00000555550 OR4K2Q8NGD2 314 aa0.93□□□□□ -2.26
SCFD1-216ENST00000555550 TMEM234Q8WY98 164 aa0.93□□□□□ -2.26
SCFD1-216ENST00000555550 TNFRSF14Q92956 283 aa0.93□□□□□ -2.26
SCFD1-216ENST00000555550 KIAA1143Q96AT1 154 aaPredicted RBP0.93□□□□□ -2.26
SCFD1-216ENST00000555550 CERS2Q96G23 380 aa0.93□□□□□ -2.26
SCFD1-216ENST00000555550 SPACA5Q96QH8 159 aa0.93□□□□□ -2.26
SCFD1-216ENST00000555550 GABRG3Q99928 467 aa0.93□□□□□ -2.26
SCFD1-216ENST00000555550 SLC7A11Q9UPY5 501 aa0.93□□□□□ -2.26
SCFD1-216ENST00000555550 KLF12Q9Y4X4 402 aa0.93□□□□□ -2.26
SCFD1-216ENST00000555550 OR51B4Q9Y5P0 310 aa0.93□□□□□ -2.26
SCFD1-216ENST00000555550 MPDZO75970 2070 aa0.93□□□□□ -2.26
SCFD1-216ENST00000555550 STRCP1A6NGW2 1772 aa0.93□□□□□ -2.26
SCFD1-216ENST00000555550 AHNAK2Q8IVF2 5795 aa0.92□□□□□ -2.26
SCFD1-216ENST00000555550 ERICH4A6NGS2 130 aa0.92□□□□□ -2.26
SCFD1-216ENST00000555550 K7EN84 100 aa0.92□□□□□ -2.26
SCFD1-216ENST00000555550 ZMPSTE24O75844 475 aa0.92□□□□□ -2.26
SCFD1-216ENST00000555550 RAB36O95755 333 aa0.92□□□□□ -2.26
SCFD1-216ENST00000555550 CSTAP01040 98 aa0.92□□□□□ -2.26
SCFD1-216ENST00000555550 GCGP01275 180 aa0.92□□□□□ -2.26
SCFD1-216ENST00000555550 GTF2F2P13984 249 aa0.92□□□□□ -2.26
SCFD1-216ENST00000555550 CTLA4P16410 223 aa0.92□□□□□ -2.26
SCFD1-216ENST00000555550 GABRR2P28476 465 aa0.92□□□□□ -2.26
SCFD1-216ENST00000555550 LCN1P31025 176 aa0.92□□□□□ -2.26
SCFD1-216ENST00000555550 HTR2BP41595 481 aa0.92□□□□□ -2.26
SCFD1-216ENST00000555550 GPR4P46093 362 aa0.92□□□□□ -2.26
SCFD1-216ENST00000555550 CLDN6P56747 220 aa0.92□□□□□ -2.26
SCFD1-216ENST00000555550 C18orf21Q32NC0 220 aaPredicted RBP0.92□□□□□ -2.26
SCFD1-216ENST00000555550 HNRNPA1L2Q32P51 320 aaKnown RBP0.92□□□□□ -2.26
SCFD1-216ENST00000555550 ACSBG2Q5FVE4 666 aa0.92□□□□□ -2.26
SCFD1-216ENST00000555550 ANGPTL8Q6UXH0 198 aa0.92□□□□□ -2.26
SCFD1-216ENST00000555550 TRAM1L1Q8N609 369 aa0.92□□□□□ -2.26
SCFD1-216ENST00000555550 FBXO36Q8NEA4 188 aa0.92□□□□□ -2.26
SCFD1-216ENST00000555550 OR51L1Q8NGJ5 315 aa0.92□□□□□ -2.26
SCFD1-216ENST00000555550 MITD1Q8WV92 249 aa0.92□□□□□ -2.26
SCFD1-216ENST00000555550 ISOC2Q96AB3 205 aa0.92□□□□□ -2.26
SCFD1-216ENST00000555550 PYURFQ96I23 114 aa0.92□□□□□ -2.26
SCFD1-216ENST00000555550 RMND1Q9NWS8 449 aa0.92□□□□□ -2.26
SCFD1-216ENST00000555550 OR5V1Q9UGF6 321 aa0.92□□□□□ -2.26
SCFD1-216ENST00000555550 TFR2Q9UP52 801 aa0.92□□□□□ -2.26
SCFD1-216ENST00000555550 CCL26Q9Y258 94 aa0.92□□□□□ -2.26
SCFD1-216ENST00000555550 POFUT2Q9Y2G5 429 aa0.92□□□□□ -2.26
SCFD1-216ENST00000555550 HSPE1-MOB4S4R3N1 261 aa0.92□□□□□ -2.26
SCFD1-216ENST00000555550 TENM3Q9P273 2699 aa0.92□□□□□ -2.26
SCFD1-216ENST00000555550 CR1P17927 2039 aa0.92□□□□□ -2.26
SCFD1-216ENST00000555550 ATG2BQ96BY7 2078 aa0.92□□□□□ -2.26
SCFD1-216ENST00000555550 IGKV1D-43A0A0B4J1Z2 117 aa0.91□□□□□ -2.26
SCFD1-216ENST00000555550 LOC100653049A0A140TA62 436 aa0.91□□□□□ -2.26
SCFD1-216ENST00000555550 KLRC4-KLRK1H3BQV0 150 aa0.91□□□□□ -2.26
SCFD1-216ENST00000555550 NDUFS8O00217 210 aa0.91□□□□□ -2.26
SCFD1-216ENST00000555550 DFFAO00273 331 aa0.91□□□□□ -2.26
SCFD1-216ENST00000555550 SPOPO43791 374 aa0.91□□□□□ -2.26
SCFD1-216ENST00000555550 COX7A2P2O60397 106 aa0.91□□□□□ -2.26
SCFD1-216ENST00000555550 POP7O75817 140 aaKnown RBP0.91□□□□□ -2.26
SCFD1-216ENST00000555550 TRAPPC6AO75865 159 aa0.91□□□□□ -2.26
SCFD1-216ENST00000555550 KRT34O76011 436 aa0.91□□□□□ -2.26
SCFD1-216ENST00000555550 CD8AP01732 235 aa0.91□□□□□ -2.26
SCFD1-216ENST00000555550 ANGP03950 147 aaKnown RBP0.91□□□□□ -2.26
SCFD1-216ENST00000555550 RHOCP08134 193 aa0.91□□□□□ -2.26
SCFD1-216ENST00000555550 CCL2P13500 99 aa0.91□□□□□ -2.26
SCFD1-216ENST00000555550 KCNJ3P48549 501 aa0.91□□□□□ -2.26
SCFD1-216ENST00000555550 ETV1P50549 477 aa0.91□□□□□ -2.26
SCFD1-216ENST00000555550 MLF1P58340 268 aa0.91□□□□□ -2.26
SCFD1-216ENST00000555550 PSG3Q16557 428 aa0.91□□□□□ -2.26
SCFD1-216ENST00000555550 CDNFQ49AH0 187 aa0.91□□□□□ -2.26
SCFD1-216ENST00000555550 TPRG1LQ5T0D9 272 aa0.91□□□□□ -2.26
SCFD1-216ENST00000555550 AADACL4Q5VUY2 407 aa0.91□□□□□ -2.26
SCFD1-216ENST00000555550 COPS6Q7L5N1 327 aa0.91□□□□□ -2.26
SCFD1-216ENST00000555550 DPPA2Q7Z7J5 298 aa0.91□□□□□ -2.26
SCFD1-216ENST00000555550 SETD3Q86TU7 594 aaPredicted RBP0.91□□□□□ -2.26
SCFD1-216ENST00000555550 LINC00596Q86U02 117 aa0.91□□□□□ -2.26
SCFD1-216ENST00000555550 GAPTQ8N292 157 aa0.91□□□□□ -2.26
SCFD1-216ENST00000555550 SYS1Q8N2H4 156 aa0.91□□□□□ -2.26
SCFD1-216ENST00000555550 PDCL2Q8N4E4 241 aa0.91□□□□□ -2.26
SCFD1-216ENST00000555550 C2orf73Q8N5S3 287 aaPredicted RBP0.91□□□□□ -2.26
SCFD1-216ENST00000555550 CCNYL1Q8N7R7 359 aa0.91□□□□□ -2.26
SCFD1-216ENST00000555550 BBOF1Q8ND07 529 aa0.91□□□□□ -2.26
SCFD1-216ENST00000555550 OR2Y1Q8NGV0 311 aa0.91□□□□□ -2.26
SCFD1-216ENST00000555550 UBA3Q8TBC4 463 aa0.91□□□□□ -2.26
SCFD1-216ENST00000555550 TCP10LQ8TDR4 215 aa0.91□□□□□ -2.26
SCFD1-216ENST00000555550 BLNKQ8WV28 456 aa0.91□□□□□ -2.26
SCFD1-216ENST00000555550 CIDECQ96AQ7 238 aaPredicted RBP0.91□□□□□ -2.26
SCFD1-216ENST00000555550 LRRC39Q96DD0 335 aa0.91□□□□□ -2.26
SCFD1-216ENST00000555550 C19orf60Q96EN9 201 aa0.91□□□□□ -2.26
SCFD1-216ENST00000555550 ZNF625Q96I27 306 aaPredicted RBP0.91□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms