RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 METTL26Q96S19 204 aa0.43□□□□□ -2.34
SNX6-204ENST00000555541 ZC4H2Q9NQZ6 224 aa0.43□□□□□ -2.34
SNX6-204ENST00000555541 TAS2R9Q9NYW1 312 aa0.43□□□□□ -2.34
SNX6-204ENST00000555541 SLC23A2Q9UGH3 650 aa0.43□□□□□ -2.34
SNX6-204ENST00000555541 URGCP-MRPS24S4R325 110 aa0.43□□□□□ -2.34
SNX6-204ENST00000555541 MICAL3Q7RTP6 2002 aa0.43□□□□□ -2.34
SNX6-204ENST00000555541 TRPM3Q9HCF6 1732 aaPredicted RBP0.42□□□□□ -2.34
SNX6-204ENST00000555541 A0A0G2JQZ4 141 aa0.42□□□□□ -2.34
SNX6-204ENST00000555541 A0A1B0GTI1 187 aa0.42□□□□□ -2.34
SNX6-204ENST00000555541 ELK4P28324 431 aa0.42□□□□□ -2.34
SNX6-204ENST00000555541 DNAJC3Q13217 504 aa0.42□□□□□ -2.34
SNX6-204ENST00000555541 DOC2AQ14183 400 aa0.42□□□□□ -2.34
SNX6-204ENST00000555541 UBE2NLQ5JXB2 153 aa0.42□□□□□ -2.34
SNX6-204ENST00000555541 BZW1Q7L1Q6 419 aaKnown RBP0.42□□□□□ -2.34
SNX6-204ENST00000555541 INO80EQ8NBZ0 244 aaPredicted RBP0.42□□□□□ -2.34
SNX6-204ENST00000555541 NAA38Q9BRA0 125 aaKnown RBP0.42□□□□□ -2.34
SNX6-204ENST00000555541 PLEKHA1Q9HB21 404 aa0.42□□□□□ -2.34
SNX6-204ENST00000555541 YLPM1P49750 1951 aaKnown RBP0.41□□□□□ -2.34
SNX6-204ENST00000555541 CEP170Q5SW79 1584 aa0.41□□□□□ -2.34
SNX6-204ENST00000555541 MUC21A0A0G2JKD1 596 aa0.41□□□□□ -2.34
SNX6-204ENST00000555541 MUC21A0A140T8X8 626 aa0.41□□□□□ -2.34
SNX6-204ENST00000555541 OR5H14A6NHG9 310 aa0.41□□□□□ -2.34
SNX6-204ENST00000555541 F8VP50 259 aa0.41□□□□□ -2.34
SNX6-204ENST00000555541 ZNF701M0R085 212 aaPredicted RBP0.41□□□□□ -2.34
SNX6-204ENST00000555541 RNF113AO15541 343 aaKnown RBP0.41□□□□□ -2.34
SNX6-204ENST00000555541 ZNF7P17097 686 aaPredicted RBP0.41□□□□□ -2.34
SNX6-204ENST00000555541 HMGN5P82970 282 aaKnown RBP0.41□□□□□ -2.34
SNX6-204ENST00000555541 TOMM34Q15785 309 aaPredicted RBP0.41□□□□□ -2.34
SNX6-204ENST00000555541 CLEC12AQ5QGZ9 265 aa0.41□□□□□ -2.34
SNX6-204ENST00000555541 TPRG1LQ5T0D9 272 aa0.41□□□□□ -2.34
SNX6-204ENST00000555541 FAM58AQ8N1B3 248 aa0.41□□□□□ -2.34
SNX6-204ENST00000555541 NT5CQ8TCD5 201 aa0.41□□□□□ -2.34
SNX6-204ENST00000555541 C10orf105Q8TEF2 133 aa0.41□□□□□ -2.34
SNX6-204ENST00000555541 LYRM4Q9HD34 91 aa0.41□□□□□ -2.34
SNX6-204ENST00000555541 LINC00588Q9Y4M8 146 aa0.41□□□□□ -2.34
SNX6-204ENST00000555541 NYNRINQ9P2P1 1898 aaKnown RBP0.41□□□□□ -2.34
SNX6-204ENST00000555541 PTPRKQ15262 1439 aa0.4□□□□□ -2.34
SNX6-204ENST00000555541 ZNF638Q14966 1978 aaKnown RBP0.4□□□□□ -2.35
SNX6-204ENST00000555541 TRGV2A0A075B6R0 118 aa0.4□□□□□ -2.35
SNX6-204ENST00000555541 A0A0J9YX75 114 aa0.4□□□□□ -2.35
SNX6-204ENST00000555541 LOC102725191A0A1B0GVB3 256 aa0.4□□□□□ -2.35
SNX6-204ENST00000555541 A0A1W2PRG6 482 aa0.4□□□□□ -2.35
SNX6-204ENST00000555541 LRRIQ4A6NIV6 560 aa0.4□□□□□ -2.35
SNX6-204ENST00000555541 CD300LBA8K4G0 201 aa0.4□□□□□ -2.35
SNX6-204ENST00000555541 SIVA1O15304 175 aa0.4□□□□□ -2.35
SNX6-204ENST00000555541 TRAPPC3O43617 180 aa0.4□□□□□ -2.35
SNX6-204ENST00000555541 GUSBP08236 651 aa0.4□□□□□ -2.35
SNX6-204ENST00000555541 SOD3P08294 240 aa0.4□□□□□ -2.35
SNX6-204ENST00000555541 MSR1P21757 451 aa0.4□□□□□ -2.35
SNX6-204ENST00000555541 HCCSP53701 268 aa0.4□□□□□ -2.35
SNX6-204ENST00000555541 CLDN18P56856 261 aa0.4□□□□□ -2.35
SNX6-204ENST00000555541 IRF8Q02556 426 aa0.4□□□□□ -2.35
SNX6-204ENST00000555541 EPGNQ6UW88 154 aa0.4□□□□□ -2.35
SNX6-204ENST00000555541 VN1R4Q7Z5H5 301 aa0.4□□□□□ -2.35
SNX6-204ENST00000555541 NIT1Q86X76 327 aa0.4□□□□□ -2.35
SNX6-204ENST00000555541 TRAM1L1Q8N609 369 aa0.4□□□□□ -2.35
SNX6-204ENST00000555541 OR4A5Q8NH83 315 aa0.4□□□□□ -2.35
SNX6-204ENST00000555541 HIST1H2BAQ96A08 127 aa0.4□□□□□ -2.35
SNX6-204ENST00000555541 CMBLQ96DG6 245 aa0.4□□□□□ -2.35
SNX6-204ENST00000555541 RILPQ96NA2 401 aa0.4□□□□□ -2.35
SNX6-204ENST00000555541 QKIQ96PU8 341 aaKnown RBP eCLIP0.4□□□□□ -2.358e-12■■■■□ 23.7
SNX6-204ENST00000555541 C20orf144Q9BQM9 153 aa0.4□□□□□ -2.35
SNX6-204ENST00000555541 TSSK6Q9BXA6 273 aa0.4□□□□□ -2.35
SNX6-204ENST00000555541 ARL6Q9H0F7 186 aa0.4□□□□□ -2.35
SNX6-204ENST00000555541 C6orf50Q9HD87 102 aa0.4□□□□□ -2.35
SNX6-204ENST00000555541 HPCAL4Q9UM19 191 aa0.4□□□□□ -2.35
SNX6-204ENST00000555541 FLVCR2Q9UPI3 526 aa0.4□□□□□ -2.35
SNX6-204ENST00000555541 C14orf166Q9Y224 244 aaKnown RBP0.4□□□□□ -2.35
SNX6-204ENST00000555541 DIDO1Q9BTC0 2240 aaKnown RBP0.4□□□□□ -2.35
SNX6-204ENST00000555541 DLG5Q8TDM6 1919 aa0.39□□□□□ -2.35
SNX6-204ENST00000555541 A0A075B6Q4 140 aa0.39□□□□□ -2.35
SNX6-204ENST00000555541 OR2AT4A6NND4 320 aa0.39□□□□□ -2.35
SNX6-204ENST00000555541 EEF1E1O43324 174 aaKnown RBP0.39□□□□□ -2.35
SNX6-204ENST00000555541 SOX14O95416 240 aa0.39□□□□□ -2.35
SNX6-204ENST00000555541 SCGB1C2P0DMR2 95 aa0.39□□□□□ -2.35
SNX6-204ENST00000555541 CPMP14384 443 aa0.39□□□□□ -2.35
SNX6-204ENST00000555541 CD82P27701 267 aa0.39□□□□□ -2.35
SNX6-204ENST00000555541 G6PCP35575 357 aa0.39□□□□□ -2.35
SNX6-204ENST00000555541 MLF1P58340 268 aa0.39□□□□□ -2.35
SNX6-204ENST00000555541 IDI1Q13907 227 aa0.39□□□□□ -2.35
SNX6-204ENST00000555541 ZCWPW2Q504Y3 356 aa0.39□□□□□ -2.35
SNX6-204ENST00000555541 GLYATQ6IB77 296 aa0.39□□□□□ -2.35
SNX6-204ENST00000555541 MARCH3Q86UD3 253 aa0.39□□□□□ -2.35
SNX6-204ENST00000555541 SCGB1C1Q8TD33 95 aa0.39□□□□□ -2.35
SNX6-204ENST00000555541 ISOC2Q96AB3 205 aa0.39□□□□□ -2.35
SNX6-204ENST00000555541 OR2M4Q96R27 311 aa0.39□□□□□ -2.35
SNX6-204ENST00000555541 SHCBP1LQ9BZQ2 653 aa0.39□□□□□ -2.35
SNX6-204ENST00000555541 ZNF436Q9C0F3 470 aaPredicted RBP0.39□□□□□ -2.35
SNX6-204ENST00000555541 RBM12B-AS1Q9P1G2 102 aa0.39□□□□□ -2.35
SNX6-204ENST00000555541 RPUSD1Q9UJJ7 312 aaKnown RBP0.39□□□□□ -2.35
SNX6-204ENST00000555541 TBC1D24Q9ULP9 559 aa0.39□□□□□ -2.35
SNX6-204ENST00000555541 TMCC3Q9ULS5 477 aa0.39□□□□□ -2.35
SNX6-204ENST00000555541 AP3M1Q9Y2T2 418 aa0.39□□□□□ -2.35
SNX6-204ENST00000555541 RTEL1-TNFRSF6BF6WH68 1400 aa0.38□□□□□ -2.35
SNX6-204ENST00000555541 SBNO1A3KN83 1393 aa0.38□□□□□ -2.35
SNX6-204ENST00000555541 IGHV1-45A0A0A0MS14 117 aa0.38□□□□□ -2.35
SNX6-204ENST00000555541 FAM240AA0A1B0GVK7 77 aa0.38□□□□□ -2.35
SNX6-204ENST00000555541 SLC5A10A0PJK1 596 aa0.38□□□□□ -2.35
SNX6-204ENST00000555541 HSBP1O75506 76 aa0.38□□□□□ -2.35
SNX6-204ENST00000555541 PLEKHA8P1O95397 391 aa0.38□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms