RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 FAAP24Q9BTP7 215 aa9.03□□□□□ -0.96
TDP1-211ENST00000555178 PECRQ9BY49 303 aa9.03□□□□□ -0.96
TDP1-211ENST00000555178 UBE2QL1A1L167 161 aa9.02□□□□□ -0.97
TDP1-211ENST00000555178 H7C417 338 aa9.02□□□□□ -0.97
TDP1-211ENST00000555178 SIRPB1O00241 398 aa9.02□□□□□ -0.97
TDP1-211ENST00000555178 SSX5O60225 188 aa9.02□□□□□ -0.97
TDP1-211ENST00000555178 NOS1APO75052 506 aaPredicted RBP9.02□□□□□ -0.97
TDP1-211ENST00000555178 FCN3O75636 299 aa9.02□□□□□ -0.97
TDP1-211ENST00000555178 RP2O75695 350 aa9.02□□□□□ -0.97
TDP1-211ENST00000555178 GOSR1O95249 250 aa9.02□□□□□ -0.97
TDP1-211ENST00000555178 DCTN2Q13561 401 aaKnown RBP9.02□□□□□ -0.97
TDP1-211ENST00000555178 RDH5Q92781 318 aa9.02□□□□□ -0.97
TDP1-211ENST00000555178 MRPS24Q96EL2 167 aaKnown RBP9.02□□□□□ -0.97
TDP1-211ENST00000555178 DIRC2Q96SL1 478 aa9.02□□□□□ -0.97
TDP1-211ENST00000555178 YLPM1P49750 1951 aaKnown RBP9.02□□□□□ -0.97
TDP1-211ENST00000555178 TRAV24A0A0B4J272 114 aa9.01□□□□□ -0.97
TDP1-211ENST00000555178 IGHV1-69-2A0A0G2JMI3 117 aa9.01□□□□□ -0.97
TDP1-211ENST00000555178 RFPL4AA6NLU0 287 aa9.01□□□□□ -0.97
TDP1-211ENST00000555178 RFPL4AL1F8VTS6 287 aa9.01□□□□□ -0.97
TDP1-211ENST00000555178 OR2H2O95918 312 aa9.01□□□□□ -0.97
TDP1-211ENST00000555178 CHRM2P08172 466 aa9.01□□□□□ -0.97
TDP1-211ENST00000555178 TNFRSF1AP19438 455 aa9.01□□□□□ -0.97
TDP1-211ENST00000555178 SSTR2P30874 369 aa9.01□□□□□ -0.97
TDP1-211ENST00000555178 MNDAP41218 407 aa9.01□□□□□ -0.97
TDP1-211ENST00000555178 NHLRC3Q5JS37 347 aa9.01□□□□□ -0.97
TDP1-211ENST00000555178 RAB12Q6IQ22 244 aa9.01□□□□□ -0.97
TDP1-211ENST00000555178 Q6P435 159 aa9.01□□□□□ -0.97
TDP1-211ENST00000555178 C20orf204Q6ZNR8 217 aa9.01□□□□□ -0.97
TDP1-211ENST00000555178 Q6ZPA2 131 aa9.01□□□□□ -0.97
TDP1-211ENST00000555178 LYSMD2Q8IV50 215 aa9.01□□□□□ -0.97
TDP1-211ENST00000555178 Q8IYB0 196 aa9.01□□□□□ -0.97
TDP1-211ENST00000555178 ZNF525Q8N782 197 aa9.01□□□□□ -0.97
TDP1-211ENST00000555178 GVQW1Q8N7I0 195 aa9.01□□□□□ -0.97
TDP1-211ENST00000555178 GDPD1Q8N9F7 314 aa9.01□□□□□ -0.97
TDP1-211ENST00000555178 Q8TCH9 128 aa9.01□□□□□ -0.97
TDP1-211ENST00000555178 SMIM4Q8WVI0 70 aa9.01□□□□□ -0.97
TDP1-211ENST00000555178 MAFIPQ8WZ33 124 aa9.01□□□□□ -0.97
TDP1-211ENST00000555178 ST8SIA4Q92187 359 aa9.01□□□□□ -0.97
TDP1-211ENST00000555178 PERPQ96FX8 193 aa9.01□□□□□ -0.97
TDP1-211ENST00000555178 THAP7Q9BT49 309 aaPredicted RBP9.01□□□□□ -0.97
TDP1-211ENST00000555178 EGLN1Q9GZT9 426 aa9.01□□□□□ -0.97
TDP1-211ENST00000555178 PLEKHJ1Q9NW61 149 aa9.01□□□□□ -0.97
TDP1-211ENST00000555178 ING3Q9NXR8 418 aa9.01□□□□□ -0.97
TDP1-211ENST00000555178 RNF7Q9UBF6 113 aa9.01□□□□□ -0.97
TDP1-211ENST00000555178 IGKV1D-17A0A075B6S4 117 aa9.01□□□□□ -0.97
TDP1-211ENST00000555178 A0A0A6YYH2 397 aa9.01□□□□□ -0.97
TDP1-211ENST00000555178 A6NJ64 397 aa9.01□□□□□ -0.97
TDP1-211ENST00000555178 SSX4O60224 188 aa9.01□□□□□ -0.97
TDP1-211ENST00000555178 PDCD6O75340 191 aa9.01□□□□□ -0.97
TDP1-211ENST00000555178 SELLP14151 372 aa9.01□□□□□ -0.97
TDP1-211ENST00000555178 DAOP14920 347 aa9.01□□□□□ -0.97
TDP1-211ENST00000555178 ZNF44P15621 663 aa9.01□□□□□ -0.97
TDP1-211ENST00000555178 PTBP1P26599 531 aaKnown RBP eCLIP9.01□□□□□ -0.975e-6■■□□□ 13.3
TDP1-211ENST00000555178 AVPI1Q5T686 147 aa9.01□□□□□ -0.97
TDP1-211ENST00000555178 BAIAP2L2Q6UXY1 529 aa9.01□□□□□ -0.97
TDP1-211ENST00000555178 CD177Q8N6Q3 437 aa9.01□□□□□ -0.97
TDP1-211ENST00000555178 CCDC32Q9BV29 185 aa9.01□□□□□ -0.97
TDP1-211ENST00000555178 CHST6Q9GZX3 395 aa9.01□□□□□ -0.97
TDP1-211ENST00000555178 TMEM106BQ9NUM4 274 aa9.01□□□□□ -0.97
TDP1-211ENST00000555178 ZNF230Q9UIE0 474 aaPredicted RBP9.01□□□□□ -0.97
TDP1-211ENST00000555178 AK3Q9UIJ7 227 aa9.01□□□□□ -0.97
TDP1-211ENST00000555178 TBC1D24Q9ULP9 559 aa9.01□□□□□ -0.97
TDP1-211ENST00000555178 ITPR3Q14573 2671 aa9.01□□□□□ -0.97
TDP1-211ENST00000555178 NOTCH2Q04721 2471 aa9□□□□□ -0.97
TDP1-211ENST00000555178 TMEM178BH3BS89 294 aa9□□□□□ -0.97
TDP1-211ENST00000555178 CTDSPLO15194 276 aa9□□□□□ -0.97
TDP1-211ENST00000555178 ORC5O43913 435 aa9□□□□□ -0.97
TDP1-211ENST00000555178 PSPNO60542 156 aa9□□□□□ -0.97
TDP1-211ENST00000555178 HAND1O96004 215 aa9□□□□□ -0.97
TDP1-211ENST00000555178 ACAA1P09110 424 aaPredicted RBP9□□□□□ -0.97
TDP1-211ENST00000555178 PSG2P11465 335 aa9□□□□□ -0.97
TDP1-211ENST00000555178 PRSS3P35030 304 aa9□□□□□ -0.97
TDP1-211ENST00000555178 CFHR2P36980 270 aa9□□□□□ -0.97
TDP1-211ENST00000555178 GDNFP39905 211 aa9□□□□□ -0.97
TDP1-211ENST00000555178 PITPNAQ00169 270 aa9□□□□□ -0.97
TDP1-211ENST00000555178 ZNF146Q15072 292 aa9□□□□□ -0.97
TDP1-211ENST00000555178 SMIM21Q3B7S5 101 aa9□□□□□ -0.97
TDP1-211ENST00000555178 PCGF3Q3KNV8 242 aa9□□□□□ -0.97
TDP1-211ENST00000555178 FAAP20Q6NZ36 180 aa9□□□□□ -0.97
TDP1-211ENST00000555178 LYPD2Q6UXB3 125 aa9□□□□□ -0.97
TDP1-211ENST00000555178 C5orf24Q7Z6I8 188 aa9□□□□□ -0.97
TDP1-211ENST00000555178 TRAPPC6BQ86SZ2 158 aa9□□□□□ -0.97
TDP1-211ENST00000555178 FAM90A1Q86YD7 464 aa9□□□□□ -0.97
TDP1-211ENST00000555178 SUMF2Q8NBJ7 301 aa9□□□□□ -0.97
TDP1-211ENST00000555178 OR10Z1Q8NGY1 313 aa9□□□□□ -0.97
TDP1-211ENST00000555178 NEDD4LQ96PU5 975 aa9□□□□□ -0.97
TDP1-211ENST00000555178 RAB1BQ9H0U4 201 aa9□□□□□ -0.97
TDP1-211ENST00000555178 PPA2Q9H2U2 334 aa9□□□□□ -0.97
TDP1-211ENST00000555178 PCDHB16Q9NRJ7 776 aa9□□□□□ -0.97
TDP1-211ENST00000555178 RCC2Q9P258 522 aaKnown RBP9□□□□□ -0.97
TDP1-211ENST00000555178 NLKQ9UBE8 527 aa9□□□□□ -0.97
TDP1-211ENST00000555178 DNAJB11Q9UBS4 358 aa9□□□□□ -0.97
TDP1-211ENST00000555178 OR2AT4A6NND4 320 aa9□□□□□ -0.97
TDP1-211ENST00000555178 GABARAPH6UMI1 98 aa9□□□□□ -0.97
TDP1-211ENST00000555178 SLC33A1O00400 549 aaPredicted RBP9□□□□□ -0.97
TDP1-211ENST00000555178 F12P00748 615 aaPredicted RBP9□□□□□ -0.97
TDP1-211ENST00000555178 IL13RA2Q14627 380 aa9□□□□□ -0.97
TDP1-211ENST00000555178 ZMYND11Q15326 602 aa9□□□□□ -0.97
TDP1-211ENST00000555178 CARTPTQ16568 116 aa9□□□□□ -0.97
TDP1-211ENST00000555178 MPV17LQ2QL34 196 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms