RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 ASF1BQ9NVP2 202 aa7.57□□□□□ -1.2
TDP1-210ENST00000554976 NKIRAS2Q9NYR9 191 aa7.57□□□□□ -1.2
TDP1-210ENST00000554976 PLEKHA6Q9Y2H5 1048 aa7.57□□□□□ -1.2
TDP1-210ENST00000554976 ANKRD11Q6UB99 2663 aaPredicted RBP7.57□□□□□ -1.2
TDP1-210ENST00000554976 TMEM82A0PJX8 343 aa7.57□□□□□ -1.2
TDP1-210ENST00000554976 LRP5LA4QPB2 252 aa7.57□□□□□ -1.2
TDP1-210ENST00000554976 ANKRD30BLA7E2S9 258 aa7.57□□□□□ -1.2
TDP1-210ENST00000554976 NAPSAO96009 420 aa7.57□□□□□ -1.2
TDP1-210ENST00000554976 GNG3P63215 75 aa7.57□□□□□ -1.2
TDP1-210ENST00000554976 NAAAQ02083 359 aa7.57□□□□□ -1.2
TDP1-210ENST00000554976 MAB21L1Q13394 359 aa7.57□□□□□ -1.2
TDP1-210ENST00000554976 MRPL49Q13405 166 aaKnown RBP7.57□□□□□ -1.2
TDP1-210ENST00000554976 ZNF124Q15973 351 aa7.57□□□□□ -1.2
TDP1-210ENST00000554976 C4orf46Q504U0 113 aa7.57□□□□□ -1.2
TDP1-210ENST00000554976 RNASE10Q5GAN6 216 aaKnown RBP7.57□□□□□ -1.2
TDP1-210ENST00000554976 Q6P435 159 aa7.57□□□□□ -1.2
TDP1-210ENST00000554976 ZNF880Q6PDB4 577 aa7.57□□□□□ -1.2
TDP1-210ENST00000554976 C3P1Q6ZMU1 363 aa7.57□□□□□ -1.2
TDP1-210ENST00000554976 NLRC3Q7RTR2 1065 aa7.57□□□□□ -1.2
TDP1-210ENST00000554976 MRGPRGQ86SM5 289 aa7.57□□□□□ -1.2
TDP1-210ENST00000554976 C1orf174Q8IYL3 243 aa7.57□□□□□ -1.2
TDP1-210ENST00000554976 BHLHE23Q8NDY6 225 aa7.57□□□□□ -1.2
TDP1-210ENST00000554976 OR8G5Q8NG78 346 aa7.57□□□□□ -1.2
TDP1-210ENST00000554976 OR11H4Q8NGC9 324 aa7.57□□□□□ -1.2
TDP1-210ENST00000554976 OR5AP2Q8NGF4 316 aa7.57□□□□□ -1.2
TDP1-210ENST00000554976 DYRK2Q92630 601 aa7.57□□□□□ -1.2
TDP1-210ENST00000554976 ZNF436Q9C0F3 470 aaPredicted RBP7.57□□□□□ -1.2
TDP1-210ENST00000554976 PPP1R14DQ9NXH3 145 aa7.57□□□□□ -1.2
TDP1-210ENST00000554976 COA4Q9NYJ1 87 aa7.57□□□□□ -1.2
TDP1-210ENST00000554976 GPR132Q9UNW8 380 aa7.57□□□□□ -1.2
TDP1-210ENST00000554976 RTTNQ86VV8 2226 aa7.57□□□□□ -1.2
TDP1-210ENST00000554976 RHBDL1O75783 438 aa7.57□□□□□ -1.2
TDP1-210ENST00000554976 OR4E1P0C645 316 aa7.57□□□□□ -1.2
TDP1-210ENST00000554976 SELEP16581 610 aa7.57□□□□□ -1.2
TDP1-210ENST00000554976 CXADRP78310 365 aa7.57□□□□□ -1.2
TDP1-210ENST00000554976 BTN1A1Q13410 526 aa7.57□□□□□ -1.2
TDP1-210ENST00000554976 MKXQ8IYA7 352 aa7.57□□□□□ -1.2
TDP1-210ENST00000554976 RTBDNQ9BSG5 229 aaPredicted RBP7.57□□□□□ -1.2
TDP1-210ENST00000554976 SHARPINQ9H0F6 387 aa7.57□□□□□ -1.2
TDP1-210ENST00000554976 PURGQ9UJV8 347 aaKnown RBP7.57□□□□□ -1.2
TDP1-210ENST00000554976 NOP16Q9Y3C1 178 aaKnown RBP7.57□□□□□ -1.2
TDP1-210ENST00000554976 TANC2Q9HCD6 1990 aa7.56□□□□□ -1.2
TDP1-210ENST00000554976 TRBV6-6A0A0A6YYG2 114 aa7.56□□□□□ -1.2
TDP1-210ENST00000554976 DBX1A6NMT0 343 aa7.56□□□□□ -1.2
TDP1-210ENST00000554976 LINC00587B1AMM8 73 aa7.56□□□□□ -1.2
TDP1-210ENST00000554976 C3orf80F5H4A9 247 aa7.56□□□□□ -1.2
TDP1-210ENST00000554976 J3QT63 122 aa7.56□□□□□ -1.2
TDP1-210ENST00000554976 CSTBP04080 98 aaKnown RBP7.56□□□□□ -1.2
TDP1-210ENST00000554976 RRASP10301 218 aa7.56□□□□□ -1.2
TDP1-210ENST00000554976 SELLP14151 372 aa7.56□□□□□ -1.2
TDP1-210ENST00000554976 RPS2P15880 293 aaKnown RBP7.56□□□□□ -1.2
TDP1-210ENST00000554976 SNU13P55769 128 aaKnown RBP7.56□□□□□ -1.2
TDP1-210ENST00000554976 PER3P56645 1201 aa7.56□□□□□ -1.2
TDP1-210ENST00000554976 NKPD1Q17RQ9 610 aa7.56□□□□□ -1.2
TDP1-210ENST00000554976 MPV17LQ2QL34 196 aa7.56□□□□□ -1.2
TDP1-210ENST00000554976 CLLU1Q5K131 121 aa7.56□□□□□ -1.2
TDP1-210ENST00000554976 LY6G6FQ5SQ64 297 aa7.56□□□□□ -1.2
TDP1-210ENST00000554976 FAHD2BQ6P2I3 314 aaPredicted RBP7.56□□□□□ -1.2
TDP1-210ENST00000554976 ZNF573Q86YE8 665 aa7.56□□□□□ -1.2
TDP1-210ENST00000554976 GAPTQ8N292 157 aa7.56□□□□□ -1.2
TDP1-210ENST00000554976 C9orf62Q8N4C0 152 aa7.56□□□□□ -1.2
TDP1-210ENST00000554976 SCCPDHQ8NBX0 429 aa7.56□□□□□ -1.2
TDP1-210ENST00000554976 ADAD2Q8NCV1 583 aaKnown RBP7.56□□□□□ -1.2
TDP1-210ENST00000554976 TMEM185AQ8NFB2 350 aa7.56□□□□□ -1.2
TDP1-210ENST00000554976 ZNF431Q8TF32 576 aaPredicted RBP7.56□□□□□ -1.2
TDP1-210ENST00000554976 FAHD2AQ96GK7 314 aa7.56□□□□□ -1.2
TDP1-210ENST00000554976 C1QTNF6Q9BXI9 259 aa7.56□□□□□ -1.2
TDP1-210ENST00000554976 C5orf66Q9H5L9 145 aa7.56□□□□□ -1.2
TDP1-210ENST00000554976 PRORYQ9H606 182 aa7.56□□□□□ -1.2
TDP1-210ENST00000554976 PLEKHJ1Q9NW61 149 aa7.56□□□□□ -1.2
TDP1-210ENST00000554976 MGAT4CQ9UBM8 478 aa7.56□□□□□ -1.2
TDP1-210ENST00000554976 SCP2D1Q9UJQ7 156 aa7.56□□□□□ -1.2
TDP1-210ENST00000554976 EDARQ9UNE0 448 aa7.56□□□□□ -1.2
TDP1-210ENST00000554976 TMEM210A6NLX4 147 aa7.56□□□□□ -1.2
TDP1-210ENST00000554976 FABP7O15540 132 aa7.56□□□□□ -1.2
TDP1-210ENST00000554976 C1QTNF9P0C862 333 aa7.56□□□□□ -1.2
TDP1-210ENST00000554976 PGA5P0DJD9 388 aa7.56□□□□□ -1.2
TDP1-210ENST00000554976 H2BFSP57053 126 aa7.56□□□□□ -1.2
TDP1-210ENST00000554976 IL13RA2Q14627 380 aa7.56□□□□□ -1.2
TDP1-210ENST00000554976 TMEM211Q6ICI0 200 aa7.56□□□□□ -1.2
TDP1-210ENST00000554976 TEX261Q6UWH6 196 aa7.56□□□□□ -1.2
TDP1-210ENST00000554976 DHRS11Q6UWP2 260 aa7.56□□□□□ -1.2
TDP1-210ENST00000554976 C17orf107Q6ZR85 190 aa7.56□□□□□ -1.2
TDP1-210ENST00000554976 OR8H1Q8NGG4 311 aa7.56□□□□□ -1.2
TDP1-210ENST00000554976 MAFIPQ8WZ33 124 aa7.56□□□□□ -1.2
TDP1-210ENST00000554976 ZNF488Q96MN9 340 aa7.56□□□□□ -1.2
TDP1-210ENST00000554976 NRIP2Q9BQI9 281 aa7.56□□□□□ -1.2
TDP1-210ENST00000554976 BCL2L14Q9BZR8 327 aa7.56□□□□□ -1.2
TDP1-210ENST00000554976 HSPB11Q9Y547 144 aa7.56□□□□□ -1.2
TDP1-210ENST00000554976 U3KQ87 197 aa7.56□□□□□ -1.2
TDP1-210ENST00000554976 RIF1Q5UIP0 2472 aaKnown RBP7.56□□□□□ -1.2
TDP1-210ENST00000554976 SHANK1Q9Y566 2161 aa7.56□□□□□ -1.2
TDP1-210ENST00000554976 TRAV24A0A0B4J272 114 aa7.55□□□□□ -1.2
TDP1-210ENST00000554976 TRAV20A0A0B4J274 112 aa7.55□□□□□ -1.2
TDP1-210ENST00000554976 RPS10-NUDT3A0A1W2PQS6 291 aa7.55□□□□□ -1.2
TDP1-210ENST00000554976 OR5H14A6NHG9 310 aa7.55□□□□□ -1.2
TDP1-210ENST00000554976 CREBL2O60519 120 aaPredicted RBP7.55□□□□□ -1.2
TDP1-210ENST00000554976 ANXA3P12429 323 aa7.55□□□□□ -1.2
TDP1-210ENST00000554976 HLA-GP17693 338 aa7.55□□□□□ -1.2
TDP1-210ENST00000554976 TAS2R46P59540 309 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms