RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 FPR2P25090 351 aa14.92□□□□□ -0.02
SHOX-204ENST00000554971 SLC6A9P48067 706 aa14.92□□□□□ -0.02
SHOX-204ENST00000554971 SCRN3Q0VDG4 424 aa14.92□□□□□ -0.02
SHOX-204ENST00000554971 ARFRP1Q13795 201 aa14.92□□□□□ -0.02
SHOX-204ENST00000554971 RSPO1Q2MKA7 263 aaPredicted RBP14.92□□□□□ -0.02
SHOX-204ENST00000554971 HIST2H2BCQ6DN03 193 aa14.92□□□□□ -0.02
SHOX-204ENST00000554971 PEG10Q86TG7 708 aaKnown RBP14.92□□□□□ -0.02
SHOX-204ENST00000554971 WDR31Q8NA23 367 aa14.92□□□□□ -0.02
SHOX-204ENST00000554971 COQ8AQ8NI60 647 aa14.92□□□□□ -0.02
SHOX-204ENST00000554971 PPP1R1CQ8WVI7 109 aa14.92□□□□□ -0.02
SHOX-204ENST00000554971 SPACA5Q96QH8 159 aa14.92□□□□□ -0.02
SHOX-204ENST00000554971 FOXB1Q99853 325 aa14.92□□□□□ -0.02
SHOX-204ENST00000554971 PLEK2Q9NYT0 353 aa14.92□□□□□ -0.02
SHOX-204ENST00000554971 OR5H1A6NKK0 313 aa14.91□□□□□ -0.02
SHOX-204ENST00000554971 A8MXK9 166 aa14.91□□□□□ -0.02
SHOX-204ENST00000554971 ZNF250P15622 560 aa14.91□□□□□ -0.02
SHOX-204ENST00000554971 TGFBR3Q03167 851 aa14.91□□□□□ -0.02
SHOX-204ENST00000554971 STK11Q15831 433 aa14.91□□□□□ -0.02
SHOX-204ENST00000554971 SLC22A6Q4U2R8 563 aa14.91□□□□□ -0.02
SHOX-204ENST00000554971 C17orf107Q6ZR85 190 aa14.91□□□□□ -0.02
SHOX-204ENST00000554971 OVCH2Q7RTZ1 564 aa14.91□□□□□ -0.02
SHOX-204ENST00000554971 LHFPL1Q86WI0 220 aa14.91□□□□□ -0.02
SHOX-204ENST00000554971 C1orf162Q8NEQ5 155 aaPredicted RBP14.91□□□□□ -0.02
SHOX-204ENST00000554971 ST8SIA2Q92186 375 aa14.91□□□□□ -0.02
SHOX-204ENST00000554971 ST8SIA4Q92187 359 aa14.91□□□□□ -0.02
SHOX-204ENST00000554971 ARHGAP5-AS1Q96IT6 56 aa14.91□□□□□ -0.02
SHOX-204ENST00000554971 RGCCQ9H4X1 137 aa14.91□□□□□ -0.02
SHOX-204ENST00000554971 BANF2Q9H503 90 aa14.91□□□□□ -0.02
SHOX-204ENST00000554971 RAB18Q9NP72 206 aa14.91□□□□□ -0.02
SHOX-204ENST00000554971 TMEM38BQ9NVV0 291 aa14.91□□□□□ -0.02
SHOX-204ENST00000554971 GLS2Q9UI32 602 aa14.91□□□□□ -0.02
SHOX-204ENST00000554971 TRBV6-7A0A0A0MS04 114 aa14.9□□□□□ -0.02
SHOX-204ENST00000554971 SFT2D2O95562 160 aa14.9□□□□□ -0.02
SHOX-204ENST00000554971 PRKACBP22694 351 aa14.9□□□□□ -0.02
SHOX-204ENST00000554971 CRYGSP22914 178 aa14.9□□□□□ -0.02
SHOX-204ENST00000554971 FAM209AQ5JX71 171 aa14.9□□□□□ -0.02
SHOX-204ENST00000554971 SP5Q6BEB4 398 aaPredicted RBP14.9□□□□□ -0.02
SHOX-204ENST00000554971 MEX3BQ6ZN04 569 aaKnown RBP14.9□□□□□ -0.02
SHOX-204ENST00000554971 INO80EQ8NBZ0 244 aaPredicted RBP14.9□□□□□ -0.02
SHOX-204ENST00000554971 PIGLQ9Y2B2 252 aa14.9□□□□□ -0.02
SHOX-204ENST00000554971 SGCEO43556 437 aa14.9□□□□□ -0.02
SHOX-204ENST00000554971 FGF2P09038 288 aa14.9□□□□□ -0.02
SHOX-204ENST00000554971 AKR1C4P17516 323 aa14.9□□□□□ -0.02
SHOX-204ENST00000554971 AMY2BP19961 511 aa14.9□□□□□ -0.02
SHOX-204ENST00000554971 VAMP1P23763 118 aa14.9□□□□□ -0.02
SHOX-204ENST00000554971 PSMB6P28072 239 aa14.9□□□□□ -0.02
SHOX-204ENST00000554971 PCBD1P61457 104 aa14.9□□□□□ -0.02
SHOX-204ENST00000554971 UBE2V2Q15819 145 aa14.9□□□□□ -0.02
SHOX-204ENST00000554971 TIMM23BQ5SRD1 257 aa14.9□□□□□ -0.02
SHOX-204ENST00000554971 RNF144BQ7Z419 303 aa14.9□□□□□ -0.02
SHOX-204ENST00000554971 SEMA6DQ8NFY4 1073 aa14.9□□□□□ -0.02
SHOX-204ENST00000554971 MARCH1Q8TCQ1 289 aa14.9□□□□□ -0.02
SHOX-204ENST00000554971 POM121Q96HA1 1249 aa14.9□□□□□ -0.02
SHOX-204ENST00000554971 SPOCK3Q9BQ16 436 aa14.9□□□□□ -0.02
SHOX-204ENST00000554971 RASL12Q9NYN1 266 aa14.9□□□□□ -0.02
SHOX-204ENST00000554971 ZNF230Q9UIE0 474 aaPredicted RBP14.9□□□□□ -0.02
SHOX-204ENST00000554971 EDARQ9UNE0 448 aa14.9□□□□□ -0.02
SHOX-204ENST00000554971 SLC25A15Q9Y619 301 aa14.9□□□□□ -0.02
SHOX-204ENST00000554971 SIAH2O43255 324 aa14.89□□□□□ -0.03
SHOX-204ENST00000554971 KRTAP27-1Q3LI81 207 aa14.89□□□□□ -0.03
SHOX-204ENST00000554971 NRN1LQ496H8 165 aa14.89□□□□□ -0.03
SHOX-204ENST00000554971 CRIP3Q6Q6R5 217 aa14.89□□□□□ -0.03
SHOX-204ENST00000554971 ADAD2Q8NCV1 583 aaKnown RBP14.89□□□□□ -0.03
SHOX-204ENST00000554971 FGFBP3Q8TAT2 258 aa14.89□□□□□ -0.03
SHOX-204ENST00000554971 PCNPQ8WW12 178 aaKnown RBP14.89□□□□□ -0.03
SHOX-204ENST00000554971 EMG1Q92979 244 aaKnown RBP14.89□□□□□ -0.03
SHOX-204ENST00000554971 SGK3Q96BR1 496 aa14.89□□□□□ -0.03
SHOX-204ENST00000554971 FBXO17Q96EF6 278 aa14.89□□□□□ -0.03
SHOX-204ENST00000554971 VRK1Q99986 396 aaPredicted RBP14.89□□□□□ -0.03
SHOX-204ENST00000554971 PECRQ9BY49 303 aa14.89□□□□□ -0.03
SHOX-204ENST00000554971 NARFLQ9H6Q4 476 aa14.89□□□□□ -0.03
SHOX-204ENST00000554971 ZSCAN5BA6NJL1 495 aa14.88□□□□□ -0.03
SHOX-204ENST00000554971 SYNGR3O43761 229 aa14.88□□□□□ -0.03
SHOX-204ENST00000554971 BLVRBP30043 206 aaPredicted RBP14.88□□□□□ -0.03
SHOX-204ENST00000554971 CNN3Q15417 329 aaKnown RBP14.88□□□□□ -0.03
SHOX-204ENST00000554971 SKA3Q8IX90 412 aa14.88□□□□□ -0.03
SHOX-204ENST00000554971 LRRC18Q8N456 261 aa14.88□□□□□ -0.03
SHOX-204ENST00000554971 C17orf78Q8N4C9 275 aa14.88□□□□□ -0.03
SHOX-204ENST00000554971 OR5AP2Q8NGF4 316 aa14.88□□□□□ -0.03
SHOX-204ENST00000554971 OR1F12Q8NHA8 337 aa14.88□□□□□ -0.03
SHOX-204ENST00000554971 PPA2Q9H2U2 334 aa14.88□□□□□ -0.03
SHOX-204ENST00000554971 FN3KRPQ9HA64 309 aa14.88□□□□□ -0.03
SHOX-204ENST00000554971 ANKRD17O75179 2603 aaKnown RBP14.88□□□□□ -0.03
SHOX-204ENST00000554971 LOC100509620A0A075B734 347 aa14.88□□□□□ -0.03
SHOX-204ENST00000554971 PATE4P0C8F1 98 aa14.88□□□□□ -0.03
SHOX-204ENST00000554971 NUP62P37198 522 aaPredicted RBP14.88□□□□□ -0.03
SHOX-204ENST00000554971 OR1S1Q8NH92 325 aa14.88□□□□□ -0.03
SHOX-204ENST00000554971 SEC22AQ96IW7 307 aa14.88□□□□□ -0.03
SHOX-204ENST00000554971 TECTBQ96PL2 329 aa14.88□□□□□ -0.03
SHOX-204ENST00000554971 METTL9Q9H1A3 318 aa14.88□□□□□ -0.03
SHOX-204ENST00000554971 C5orf66Q9H5L9 145 aa14.88□□□□□ -0.03
SHOX-204ENST00000554971 NDRG3Q9UGV2 375 aa14.88□□□□□ -0.03
SHOX-204ENST00000554971 HSF4Q9ULV5 492 aa14.88□□□□□ -0.03
SHOX-204ENST00000554971 TIMM10BQ9Y5J6 103 aa14.88□□□□□ -0.03
SHOX-204ENST00000554971 RNF222A6NCQ9 220 aa14.87□□□□□ -0.03
SHOX-204ENST00000554971 SPDEFO95238 335 aa14.87□□□□□ -0.03
SHOX-204ENST00000554971 HLA-HP01893 362 aa14.87□□□□□ -0.03
SHOX-204ENST00000554971 FAHP16930 419 aa14.87□□□□□ -0.03
SHOX-204ENST00000554971 ATP1B3P54709 279 aa14.87□□□□□ -0.03
SHOX-204ENST00000554971 SNU13P55769 128 aaKnown RBP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms