RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 Q8IYB0 196 aa10.14□□□□□ -0.79
SYNE2-214ENST00000554928 SAXO1Q8IYX7 474 aa10.14□□□□□ -0.79
SYNE2-214ENST00000554928 C11orf42Q8N5U0 333 aa10.14□□□□□ -0.79
SYNE2-214ENST00000554928 SIGLECL1Q8N7X8 197 aa10.14□□□□□ -0.79
SYNE2-214ENST00000554928 ZSCAN4Q8NAM6 433 aaPredicted RBP10.14□□□□□ -0.79
SYNE2-214ENST00000554928 PXT1Q8NFP0 134 aa10.14□□□□□ -0.79
SYNE2-214ENST00000554928 TNFRSF14Q92956 283 aa10.14□□□□□ -0.79
SYNE2-214ENST00000554928 NR1H4Q96RI1 486 aaPredicted RBP10.14□□□□□ -0.79
SYNE2-214ENST00000554928 ACOT13Q9NPJ3 140 aa10.14□□□□□ -0.79
SYNE2-214ENST00000554928 ING4Q9UNL4 249 aa10.14□□□□□ -0.79
SYNE2-214ENST00000554928 RNASEK-C17orf49H0YIS7 233 aa10.13□□□□□ -0.79
SYNE2-214ENST00000554928 GPR37O15354 613 aa10.13□□□□□ -0.79
SYNE2-214ENST00000554928 SC5DO75845 299 aa10.13□□□□□ -0.79
SYNE2-214ENST00000554928 GABRR1P24046 479 aa10.13□□□□□ -0.79
SYNE2-214ENST00000554928 DLX6P56179 175 aa10.13□□□□□ -0.79
SYNE2-214ENST00000554928 GABARAPL2P60520 117 aa10.13□□□□□ -0.79
SYNE2-214ENST00000554928 RPL31P62899 125 aaKnown RBP10.13□□□□□ -0.79
SYNE2-214ENST00000554928 EMX1Q04741 257 aaPredicted RBP10.13□□□□□ -0.79
SYNE2-214ENST00000554928 SCN1BQ07699 218 aa10.13□□□□□ -0.79
SYNE2-214ENST00000554928 MLLT11Q13015 90 aaPredicted RBP10.13□□□□□ -0.79
SYNE2-214ENST00000554928 TBCEQ15813 527 aaPredicted RBP10.13□□□□□ -0.79
SYNE2-214ENST00000554928 C11orf91Q3C1V1 193 aa10.13□□□□□ -0.79
SYNE2-214ENST00000554928 HCP5Q6MZN7 132 aa10.13□□□□□ -0.79
SYNE2-214ENST00000554928 CEACAM19Q7Z692 300 aa10.13□□□□□ -0.79
SYNE2-214ENST00000554928 LRRTM1Q86UE6 522 aa10.13□□□□□ -0.79
SYNE2-214ENST00000554928 PHC2Q8IXK0 858 aa10.13□□□□□ -0.79
SYNE2-214ENST00000554928 BPIFB2Q8N4F0 458 aa10.13□□□□□ -0.79
SYNE2-214ENST00000554928 ZDHHC22Q8N966 263 aa10.13□□□□□ -0.79
SYNE2-214ENST00000554928 OR4D6Q8NGJ1 314 aa10.13□□□□□ -0.79
SYNE2-214ENST00000554928 UFD1Q92890 307 aa10.13□□□□□ -0.79
SYNE2-214ENST00000554928 MUL1Q969V5 352 aa10.13□□□□□ -0.79
SYNE2-214ENST00000554928 SNX22Q96L94 193 aa10.13□□□□□ -0.79
SYNE2-214ENST00000554928 C1orf147Q96MC9 270 aaPredicted RBP10.13□□□□□ -0.79
SYNE2-214ENST00000554928 DUX5Q96PT3 197 aa10.13□□□□□ -0.79
SYNE2-214ENST00000554928 MGLLQ99685 303 aa10.13□□□□□ -0.79
SYNE2-214ENST00000554928 EXOSC4Q9NPD3 245 aaKnown RBP10.13□□□□□ -0.79
SYNE2-214ENST00000554928 FOXJ3Q9UPW0 622 aa10.13□□□□□ -0.79
SYNE2-214ENST00000554928 KPTNQ9Y664 436 aa10.13□□□□□ -0.79
SYNE2-214ENST00000554928 TRBV23-1A0A0A0MS06 115 aa10.12□□□□□ -0.79
SYNE2-214ENST00000554928 IGHV1-69DA0A0B4J2H0 117 aa10.12□□□□□ -0.79
SYNE2-214ENST00000554928 A0A0G2JK05 382 aa10.12□□□□□ -0.79
SYNE2-214ENST00000554928 MAGEB3O15480 346 aa10.12□□□□□ -0.79
SYNE2-214ENST00000554928 TCF21O43680 179 aa10.12□□□□□ -0.79
SYNE2-214ENST00000554928 HTR3BO95264 441 aa10.12□□□□□ -0.79
SYNE2-214ENST00000554928 IGHV1-69P01742 117 aa10.12□□□□□ -0.79
SYNE2-214ENST00000554928 CPEP16870 476 aa10.12□□□□□ -0.79
SYNE2-214ENST00000554928 EDDM3BP56851 147 aa10.12□□□□□ -0.79
SYNE2-214ENST00000554928 PRR20EP86478 221 aa10.12□□□□□ -0.79
SYNE2-214ENST00000554928 PRR20CP86479 221 aa10.12□□□□□ -0.79
SYNE2-214ENST00000554928 PRR20DP86480 221 aa10.12□□□□□ -0.79
SYNE2-214ENST00000554928 PRR20BP86481 221 aa10.12□□□□□ -0.79
SYNE2-214ENST00000554928 PRR20AP86496 221 aa10.12□□□□□ -0.79
SYNE2-214ENST00000554928 FABP5Q01469 135 aa10.12□□□□□ -0.79
SYNE2-214ENST00000554928 GRK1Q15835 563 aa10.12□□□□□ -0.79
SYNE2-214ENST00000554928 DEFB112Q30KQ8 113 aa10.12□□□□□ -0.79
SYNE2-214ENST00000554928 SPIN3Q5JUX0 258 aa10.12□□□□□ -0.79
SYNE2-214ENST00000554928 ELP2Q6IA86 826 aa10.12□□□□□ -0.79
SYNE2-214ENST00000554928 ZNF367Q7RTV3 350 aa10.12□□□□□ -0.79
SYNE2-214ENST00000554928 SPARTQ8N0X7 666 aa10.12□□□□□ -0.79
SYNE2-214ENST00000554928 OR8H2Q8N162 312 aa10.12□□□□□ -0.79
SYNE2-214ENST00000554928 JAGN1Q8N5M9 183 aa10.12□□□□□ -0.79
SYNE2-214ENST00000554928 TEX29Q8N6K0 151 aa10.12□□□□□ -0.79
SYNE2-214ENST00000554928 KIR3DL3Q8N743 410 aa10.12□□□□□ -0.79
SYNE2-214ENST00000554928 Q8NFD4 153 aa10.12□□□□□ -0.79
SYNE2-214ENST00000554928 GFI1Q99684 422 aa10.12□□□□□ -0.79
SYNE2-214ENST00000554928 MS4A7Q9GZW8 240 aaPredicted RBP10.12□□□□□ -0.79
SYNE2-214ENST00000554928 FAM234AQ9H0X4 552 aa10.12□□□□□ -0.79
SYNE2-214ENST00000554928 PPA2Q9H2U2 334 aa10.12□□□□□ -0.79
SYNE2-214ENST00000554928 KCNK15Q9H427 330 aa10.12□□□□□ -0.79
SYNE2-214ENST00000554928 Q9H521 79 aa10.12□□□□□ -0.79
SYNE2-214ENST00000554928 SEBOXQ9HB31 216 aaPredicted RBP10.12□□□□□ -0.79
SYNE2-214ENST00000554928 ISYNA1Q9NPH2 558 aa10.12□□□□□ -0.79
SYNE2-214ENST00000554928 ING3Q9NXR8 418 aa10.12□□□□□ -0.79
SYNE2-214ENST00000554928 BLOC1S6Q9UL45 172 aa10.12□□□□□ -0.79
SYNE2-214ENST00000554928 TRAV24A0A0B4J272 114 aa10.11□□□□□ -0.79
SYNE2-214ENST00000554928 SLC33A1O00400 549 aaPredicted RBP10.11□□□□□ -0.79
SYNE2-214ENST00000554928 HSPB6O14558 160 aa10.11□□□□□ -0.79
SYNE2-214ENST00000554928 UCHL1P09936 223 aa10.11□□□□□ -0.79
SYNE2-214ENST00000554928 ZNF44P15621 663 aa10.11□□□□□ -0.79
SYNE2-214ENST00000554928 SERPINA2P20848 420 aa10.11□□□□□ -0.79
SYNE2-214ENST00000554928 MTNR1BP49286 362 aa10.11□□□□□ -0.79
SYNE2-214ENST00000554928 HILS1P60008 231 aa10.11□□□□□ -0.79
SYNE2-214ENST00000554928 GPR50Q13585 617 aa10.11□□□□□ -0.79
SYNE2-214ENST00000554928 RSU1Q15404 277 aa10.11□□□□□ -0.79
SYNE2-214ENST00000554928 GPR157Q5UAW9 335 aa10.11□□□□□ -0.79
SYNE2-214ENST00000554928 GLIPR1L1Q6UWM5 242 aa10.11□□□□□ -0.79
SYNE2-214ENST00000554928 C9orf139Q6ZV77 190 aa10.11□□□□□ -0.79
SYNE2-214ENST00000554928 MS4A15Q8N5U1 240 aa10.11□□□□□ -0.79
SYNE2-214ENST00000554928 C17orf50Q8WW18 174 aa10.11□□□□□ -0.79
SYNE2-214ENST00000554928 TAF15Q92804 592 aaKnown RBP eCLIP10.11□□□□□ -0.79
SYNE2-214ENST00000554928 COQ2Q96H96 371 aa10.11□□□□□ -0.79
SYNE2-214ENST00000554928 CKLFQ9UBR5 152 aa10.11□□□□□ -0.79
SYNE2-214ENST00000554928 MRPS28Q9Y2Q9 187 aaKnown RBP10.11□□□□□ -0.79
SYNE2-214ENST00000554928 A0A0U1RQK1 487 aa10.1□□□□□ -0.79
SYNE2-214ENST00000554928 SHISA3A0PJX4 238 aa10.1□□□□□ -0.79
SYNE2-214ENST00000554928 RNF212BA8MTL3 300 aa10.1□□□□□ -0.79
SYNE2-214ENST00000554928 M0R1W7 72 aa10.1□□□□□ -0.79
SYNE2-214ENST00000554928 SH2D1BO14796 132 aa10.1□□□□□ -0.79
SYNE2-214ENST00000554928 DEGS1O15121 323 aa10.1□□□□□ -0.79
SYNE2-214ENST00000554928 MMP23AO75900 390 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms