RNA–Protein interactions for RNA: ENST00000554691.5

PCNX1-207, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,204 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-207ENST00000554691 FOXN4Q96NZ1 517 aa5.69□□□□□ -1.5
PCNX1-207ENST00000554691 CDCA3Q99618 268 aaPredicted RBP5.69□□□□□ -1.5
PCNX1-207ENST00000554691 VCX2Q9H322 139 aa5.69□□□□□ -1.5
PCNX1-207ENST00000554691 CLCF1Q9UBD9 225 aa5.69□□□□□ -1.5
PCNX1-207ENST00000554691 WASHC3Q9Y3C0 194 aa5.69□□□□□ -1.5
PCNX1-207ENST00000554691 SMCHD1A6NHR9 2005 aa5.69□□□□□ -1.5
PCNX1-207ENST00000554691 EPPINO95925 133 aa5.68□□□□□ -1.5
PCNX1-207ENST00000554691 VSIG8P0DPA2 414 aa5.68□□□□□ -1.5
PCNX1-207ENST00000554691 ZNF708P17019 499 aa5.68□□□□□ -1.5
PCNX1-207ENST00000554691 BTF3P20290 206 aaKnown RBP5.68□□□□□ -1.5
PCNX1-207ENST00000554691 CSN1S1P47710 185 aa5.68□□□□□ -1.5
PCNX1-207ENST00000554691 GNG4P50150 75 aa5.68□□□□□ -1.5
PCNX1-207ENST00000554691 EFNB2P52799 333 aa5.68□□□□□ -1.5
PCNX1-207ENST00000554691 YPEL5P62699 121 aa5.68□□□□□ -1.5
PCNX1-207ENST00000554691 FMODQ06828 376 aa5.68□□□□□ -1.5
PCNX1-207ENST00000554691 ZNF880Q6PDB4 577 aa5.68□□□□□ -1.5
PCNX1-207ENST00000554691 SLC25A34Q6PIV7 304 aa5.68□□□□□ -1.5
PCNX1-207ENST00000554691 RABEPKQ7Z6M1 372 aa5.68□□□□□ -1.5
PCNX1-207ENST00000554691 WDFY1Q8IWB7 410 aa5.68□□□□□ -1.5
PCNX1-207ENST00000554691 Q8WTZ3 238 aa5.68□□□□□ -1.5
PCNX1-207ENST00000554691 APOBEC4Q8WW27 367 aaKnown RBP5.68□□□□□ -1.5
PCNX1-207ENST00000554691 LIPHQ8WWY8 451 aa5.68□□□□□ -1.5
PCNX1-207ENST00000554691 WNT2BQ93097 391 aa5.68□□□□□ -1.5
PCNX1-207ENST00000554691 FAAP24Q9BTP7 215 aa5.68□□□□□ -1.5
PCNX1-207ENST00000554691 NRSN2Q9GZP1 204 aa5.68□□□□□ -1.5
PCNX1-207ENST00000554691 LPAR5Q9H1C0 372 aa5.68□□□□□ -1.5
PCNX1-207ENST00000554691 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.68□□□□□ -1.5
PCNX1-207ENST00000554691 APOBEC3BQ9UH17 382 aaKnown RBP5.68□□□□□ -1.5
PCNX1-207ENST00000554691 URB1O60287 2271 aaKnown RBP5.68□□□□□ -1.5
PCNX1-207ENST00000554691 UBE2L5PA0A1B0GUS4 154 aa5.68□□□□□ -1.5
PCNX1-207ENST00000554691 CRYM-AS1A6NIL9 109 aa5.68□□□□□ -1.5
PCNX1-207ENST00000554691 A8MWP6 167 aa5.68□□□□□ -1.5
PCNX1-207ENST00000554691 B4DGG1 531 aa5.68□□□□□ -1.5
PCNX1-207ENST00000554691 FGF17O60258 216 aa5.68□□□□□ -1.5
PCNX1-207ENST00000554691 PRAMEF4O60810 478 aa5.68□□□□□ -1.5
PCNX1-207ENST00000554691 ZGLP1P0C6A0 271 aa5.68□□□□□ -1.5
PCNX1-207ENST00000554691 CT45A6P0DMU7 189 aa5.68□□□□□ -1.5
PCNX1-207ENST00000554691 CT45A5P0DMU8 189 aa5.68□□□□□ -1.5
PCNX1-207ENST00000554691 CT45A7P0DMV0 189 aa5.68□□□□□ -1.5
PCNX1-207ENST00000554691 OPRM1P35372 400 aa5.68□□□□□ -1.5
PCNX1-207ENST00000554691 GPR12P47775 334 aa5.68□□□□□ -1.5
PCNX1-207ENST00000554691 UCP3P55916 312 aa5.68□□□□□ -1.5
PCNX1-207ENST00000554691 UBE2NP61088 152 aaKnown RBP5.68□□□□□ -1.5
PCNX1-207ENST00000554691 CT45A1Q5HYN5 189 aa5.68□□□□□ -1.5
PCNX1-207ENST00000554691 TMEM211Q6ICI0 200 aa5.68□□□□□ -1.5
PCNX1-207ENST00000554691 TSTD1Q8NFU3 115 aa5.68□□□□□ -1.5
PCNX1-207ENST00000554691 OR1L6Q8NGR2 347 aa5.68□□□□□ -1.5
PCNX1-207ENST00000554691 CT45A3Q8NHU0 189 aa5.68□□□□□ -1.5
PCNX1-207ENST00000554691 OR2V2Q96R30 315 aa5.68□□□□□ -1.5
PCNX1-207ENST00000554691 PRSS27Q9BQR3 290 aa5.68□□□□□ -1.5
PCNX1-207ENST00000554691 SAP30LQ9HAJ7 183 aa5.68□□□□□ -1.5
PCNX1-207ENST00000554691 LAMTOR2Q9Y2Q5 125 aa5.68□□□□□ -1.5
PCNX1-207ENST00000554691 OR51B4Q9Y5P0 310 aa5.68□□□□□ -1.5
PCNX1-207ENST00000554691 SCN1AP35498 2009 aa5.68□□□□□ -1.5
PCNX1-207ENST00000554691 ZNF732B4DXR9 585 aa5.68□□□□□ -1.5
PCNX1-207ENST00000554691 M0R135 149 aa5.68□□□□□ -1.5
PCNX1-207ENST00000554691 FABP2P12104 132 aa5.68□□□□□ -1.5
PCNX1-207ENST00000554691 EMDP50402 254 aa5.68□□□□□ -1.5
PCNX1-207ENST00000554691 NANOS3P60323 173 aaKnown RBP5.68□□□□□ -1.5
PCNX1-207ENST00000554691 EXT1Q16394 746 aa5.68□□□□□ -1.5
PCNX1-207ENST00000554691 TMEM97Q5BJF2 176 aa5.68□□□□□ -1.5
PCNX1-207ENST00000554691 BIVMQ86UB2 503 aa5.68□□□□□ -1.5
PCNX1-207ENST00000554691 C20orf196Q8IYI0 205 aa5.68□□□□□ -1.5
PCNX1-207ENST00000554691 OR51H1Q8NH63 302 aa5.68□□□□□ -1.5
PCNX1-207ENST00000554691 SGMS2Q8NHU3 365 aa5.68□□□□□ -1.5
PCNX1-207ENST00000554691 ERGIC1Q969X5 290 aa5.68□□□□□ -1.5
PCNX1-207ENST00000554691 NUDT11Q96G61 164 aa5.68□□□□□ -1.5
PCNX1-207ENST00000554691 ZNF799Q96GE5 643 aa5.68□□□□□ -1.5
PCNX1-207ENST00000554691 SFRP2Q96HF1 295 aa5.68□□□□□ -1.5
PCNX1-207ENST00000554691 TMEM208Q9BTX3 173 aa5.68□□□□□ -1.5
PCNX1-207ENST00000554691 WSB2Q9NYS7 404 aaPredicted RBP5.68□□□□□ -1.5
PCNX1-207ENST00000554691 MTCH1Q9NZJ7 389 aa5.68□□□□□ -1.5
PCNX1-207ENST00000554691 B3GAT1Q9P2W7 334 aa5.68□□□□□ -1.5
PCNX1-207ENST00000554691 HDGFL3Q9Y3E1 203 aa5.68□□□□□ -1.5
PCNX1-207ENST00000554691 GBF1Q92538 1859 aa5.67□□□□□ -1.5
PCNX1-207ENST00000554691 A0A1W2PP55 124 aa5.67□□□□□ -1.5
PCNX1-207ENST00000554691 FRG2CA6NGY1 282 aa5.67□□□□□ -1.5
PCNX1-207ENST00000554691 SNURFLB1AK76 121 aa5.67□□□□□ -1.5
PCNX1-207ENST00000554691 H3BML4 177 aa5.67□□□□□ -1.5
PCNX1-207ENST00000554691 NPIPB7O75200 414 aa5.67□□□□□ -1.5
PCNX1-207ENST00000554691 MPDU1O75352 247 aa5.67□□□□□ -1.5
PCNX1-207ENST00000554691 UPK3AO75631 287 aa5.67□□□□□ -1.5
PCNX1-207ENST00000554691 RHBDL1O75783 438 aa5.67□□□□□ -1.5
PCNX1-207ENST00000554691 DHRS3O75911 302 aa5.67□□□□□ -1.5
PCNX1-207ENST00000554691 HMGA1P17096 107 aaKnown RBP5.67□□□□□ -1.5
PCNX1-207ENST00000554691 EN2P19622 333 aaPredicted RBP5.67□□□□□ -1.5
PCNX1-207ENST00000554691 HHEXQ03014 270 aa5.67□□□□□ -1.5
PCNX1-207ENST00000554691 TGFBR3Q03167 851 aa5.67□□□□□ -1.5
PCNX1-207ENST00000554691 SP6Q3SY56 376 aa5.67□□□□□ -1.5
PCNX1-207ENST00000554691 NUDT10Q8NFP7 164 aa5.67□□□□□ -1.5
PCNX1-207ENST00000554691 OR4N2Q8NGD1 307 aa5.67□□□□□ -1.5
PCNX1-207ENST00000554691 DNAJA3Q96EY1 480 aa5.67□□□□□ -1.5
PCNX1-207ENST00000554691 PCGF1Q9BSM1 259 aa5.67□□□□□ -1.5
PCNX1-207ENST00000554691 RSG1Q9BU20 258 aa5.67□□□□□ -1.5
PCNX1-207ENST00000554691 HINT2Q9BX68 163 aa5.67□□□□□ -1.5
PCNX1-207ENST00000554691 MBNL1Q9NR56 388 aaKnown RBP5.67□□□□□ -1.5
PCNX1-207ENST00000554691 SPANXA1Q9NS26 97 aa5.67□□□□□ -1.5
PCNX1-207ENST00000554691 FBLN5Q9UBX5 448 aa5.67□□□□□ -1.5
PCNX1-207ENST00000554691 TIMM9Q9Y5J7 89 aa5.67□□□□□ -1.5
PCNX1-207ENST00000554691 CACNA1CQ13936 2221 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms