RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 SCN1BQ07699 218 aa12.06□□□□□ -0.48
SHOX2-206ENST00000554685 ARFRP1Q13795 201 aa12.06□□□□□ -0.48
SHOX2-206ENST00000554685 ZNF787Q6DD87 383 aa12.06□□□□□ -0.48
SHOX2-206ENST00000554685 Q8N402 240 aa12.06□□□□□ -0.48
SHOX2-206ENST00000554685 SMIM4Q8WVI0 70 aa12.06□□□□□ -0.48
SHOX2-206ENST00000554685 FCAMRQ8WWV6 532 aa12.06□□□□□ -0.48
SHOX2-206ENST00000554685 ABHD1Q96SE0 405 aa12.06□□□□□ -0.48
SHOX2-206ENST00000554685 CHODLQ9H9P2 273 aa12.06□□□□□ -0.48
SHOX2-206ENST00000554685 TREM2Q9NZC2 230 aa12.06□□□□□ -0.48
SHOX2-206ENST00000554685 OR14J1Q9UGF5 321 aa12.06□□□□□ -0.48
SHOX2-206ENST00000554685 ROS1P08922 2347 aa12.06□□□□□ -0.48
SHOX2-206ENST00000554685 TMEM235A6NFC5 223 aa12.05□□□□□ -0.48
SHOX2-206ENST00000554685 RFPL4AA6NLU0 287 aa12.05□□□□□ -0.48
SHOX2-206ENST00000554685 C3orf80F5H4A9 247 aa12.05□□□□□ -0.48
SHOX2-206ENST00000554685 RFPL4AL1F8VTS6 287 aa12.05□□□□□ -0.48
SHOX2-206ENST00000554685 GPR37O15354 613 aa12.05□□□□□ -0.48
SHOX2-206ENST00000554685 RP2O75695 350 aa12.05□□□□□ -0.48
SHOX2-206ENST00000554685 OR2H2O95918 312 aa12.05□□□□□ -0.48
SHOX2-206ENST00000554685 LPLP06858 475 aa12.05□□□□□ -0.48
SHOX2-206ENST00000554685 CD3GP09693 182 aa12.05□□□□□ -0.48
SHOX2-206ENST00000554685 PSG2P11465 335 aa12.05□□□□□ -0.48
SHOX2-206ENST00000554685 GNB3P16520 340 aa12.05□□□□□ -0.48
SHOX2-206ENST00000554685 LMO1P25800 156 aa12.05□□□□□ -0.48
SHOX2-206ENST00000554685 DUSP1P28562 367 aa12.05□□□□□ -0.48
SHOX2-206ENST00000554685 PRDX2P32119 198 aa12.05□□□□□ -0.48
SHOX2-206ENST00000554685 MDH2P40926 338 aaKnown RBP12.05□□□□□ -0.48
SHOX2-206ENST00000554685 CBX5P45973 191 aa12.05□□□□□ -0.48
SHOX2-206ENST00000554685 TMEM33P57088 247 aa12.05□□□□□ -0.48
SHOX2-206ENST00000554685 SSBP1Q04837 148 aaKnown RBP12.05□□□□□ -0.48
SHOX2-206ENST00000554685 MADCAM1Q13477 382 aa12.05□□□□□ -0.48
SHOX2-206ENST00000554685 PAN3Q58A45 887 aaKnown RBP12.05□□□□□ -0.48
SHOX2-206ENST00000554685 PLAC9Q5JTB6 97 aa12.05□□□□□ -0.48
SHOX2-206ENST00000554685 HACD4Q5VWC8 232 aa12.05□□□□□ -0.48
SHOX2-206ENST00000554685 SHEQ5VZ18 495 aa12.05□□□□□ -0.48
SHOX2-206ENST00000554685 STUMQ69YW2 141 aa12.05□□□□□ -0.48
SHOX2-206ENST00000554685 SIGIRRQ6IA17 410 aa12.05□□□□□ -0.48
SHOX2-206ENST00000554685 Q6P435 159 aa12.05□□□□□ -0.48
SHOX2-206ENST00000554685 MUC20Q8N307 709 aaPredicted RBP12.05□□□□□ -0.48
SHOX2-206ENST00000554685 NEK7Q8TDX7 302 aa12.05□□□□□ -0.48
SHOX2-206ENST00000554685 ST8SIA4Q92187 359 aa12.05□□□□□ -0.48
SHOX2-206ENST00000554685 RAB1CQ92928 201 aa12.05□□□□□ -0.48
SHOX2-206ENST00000554685 YIPF5Q969M3 257 aa12.05□□□□□ -0.48
SHOX2-206ENST00000554685 PALMDQ9NP74 551 aa12.05□□□□□ -0.48
SHOX2-206ENST00000554685 CACNG2Q9Y698 323 aa12.05□□□□□ -0.48
SHOX2-206ENST00000554685 PKDREJQ9NTG1 2253 aa12.04□□□□□ -0.48
SHOX2-206ENST00000554685 ARFGEF3Q5TH69 2177 aa12.04□□□□□ -0.48
SHOX2-206ENST00000554685 H7C1Q1 480 aa12.04□□□□□ -0.48
SHOX2-206ENST00000554685 SIRPB1O00241 398 aa12.04□□□□□ -0.48
SHOX2-206ENST00000554685 COL8A2P25067 703 aa12.04□□□□□ -0.48
SHOX2-206ENST00000554685 GABRA2P47869 451 aa12.04□□□□□ -0.48
SHOX2-206ENST00000554685 INPP1P49441 399 aa12.04□□□□□ -0.48
SHOX2-206ENST00000554685 ACTBP60709 375 aa12.04□□□□□ -0.48
SHOX2-206ENST00000554685 BTG1P62324 171 aa12.04□□□□□ -0.48
SHOX2-206ENST00000554685 ACTG1P63261 375 aa12.04□□□□□ -0.48
SHOX2-206ENST00000554685 ATPAF1Q5TC12 328 aaPredicted RBP12.04□□□□□ -0.48
SHOX2-206ENST00000554685 TRIQKQ629K1 86 aa12.04□□□□□ -0.48
SHOX2-206ENST00000554685 SFRP4Q6FHJ7 346 aaPredicted RBP12.04□□□□□ -0.48
SHOX2-206ENST00000554685 C6orf201Q7Z4U5 140 aa12.04□□□□□ -0.48
SHOX2-206ENST00000554685 OR8H2Q8N162 312 aa12.04□□□□□ -0.48
SHOX2-206ENST00000554685 ZNF561Q8N587 486 aa12.04□□□□□ -0.48
SHOX2-206ENST00000554685 SUMF2Q8NBJ7 301 aa12.04□□□□□ -0.48
SHOX2-206ENST00000554685 ANGPTL6Q8NI99 470 aa12.04□□□□□ -0.48
SHOX2-206ENST00000554685 SDSLQ96GA7 329 aa12.04□□□□□ -0.48
SHOX2-206ENST00000554685 MED30Q96HR3 178 aa12.04□□□□□ -0.48
SHOX2-206ENST00000554685 DPCDQ9BVM2 203 aaPredicted RBP12.04□□□□□ -0.48
SHOX2-206ENST00000554685 RIMS4Q9H426 269 aaPredicted RBP12.04□□□□□ -0.48
SHOX2-206ENST00000554685 ZNF665Q9H7R5 613 aa12.04□□□□□ -0.48
SHOX2-206ENST00000554685 ZMAT3Q9HA38 289 aaKnown RBP12.04□□□□□ -0.48
SHOX2-206ENST00000554685 ZNF701Q9NV72 531 aaPredicted RBP12.04□□□□□ -0.48
SHOX2-206ENST00000554685 ICE1Q9Y2F5 2266 aa12.04□□□□□ -0.48
SHOX2-206ENST00000554685 IGKV1D-17A0A075B6S4 117 aa12.03□□□□□ -0.48
SHOX2-206ENST00000554685 IGHV3OR15-7A0A075B7D8 119 aa12.03□□□□□ -0.48
SHOX2-206ENST00000554685 TRAV24A0A0B4J272 114 aa12.03□□□□□ -0.48
SHOX2-206ENST00000554685 POM121CA8CG34 1229 aa12.03□□□□□ -0.48
SHOX2-206ENST00000554685 J3QRK9 145 aa12.03□□□□□ -0.48
SHOX2-206ENST00000554685 SLC33A1O00400 549 aaPredicted RBP12.03□□□□□ -0.48
SHOX2-206ENST00000554685 RBBP9O75884 186 aa12.03□□□□□ -0.48
SHOX2-206ENST00000554685 CSF3P09919 207 aa12.03□□□□□ -0.48
SHOX2-206ENST00000554685 GSTT2BP0CG30 244 aa12.03□□□□□ -0.48
SHOX2-206ENST00000554685 PAX1P15863 534 aa12.03□□□□□ -0.48
SHOX2-206ENST00000554685 COL10A1Q03692 680 aa12.03□□□□□ -0.48
SHOX2-206ENST00000554685 DCTN2Q13561 401 aaKnown RBP12.03□□□□□ -0.48
SHOX2-206ENST00000554685 PDCD1Q15116 288 aa12.03□□□□□ -0.48
SHOX2-206ENST00000554685 FAM201AQ5SY85 155 aa12.03□□□□□ -0.48
SHOX2-206ENST00000554685 C16orf87Q6PH81 154 aa12.03□□□□□ -0.48
SHOX2-206ENST00000554685 DNM1P46Q6ZS02 220 aa12.03□□□□□ -0.48
SHOX2-206ENST00000554685 SLC36A1Q7Z2H8 476 aa12.03□□□□□ -0.48
SHOX2-206ENST00000554685 TGIF2LYQ8IUE0 185 aa12.03□□□□□ -0.48
SHOX2-206ENST00000554685 ASCC1Q8N9N2 400 aaKnown RBP12.03□□□□□ -0.48
SHOX2-206ENST00000554685 DEFB108BQ8NET1 73 aa12.03□□□□□ -0.48
SHOX2-206ENST00000554685 OR5D13Q8NGL4 314 aa12.03□□□□□ -0.48
SHOX2-206ENST00000554685 GPX8Q8TED1 209 aa12.03□□□□□ -0.48
SHOX2-206ENST00000554685 SEH1LQ96EE3 360 aa12.03□□□□□ -0.48
SHOX2-206ENST00000554685 SNX22Q96L94 193 aa12.03□□□□□ -0.48
SHOX2-206ENST00000554685 CMSS1Q9BQ75 279 aaKnown RBP12.03□□□□□ -0.48
SHOX2-206ENST00000554685 SULT4A1Q9BR01 284 aa12.03□□□□□ -0.48
SHOX2-206ENST00000554685 FAAP24Q9BTP7 215 aa12.03□□□□□ -0.48
SHOX2-206ENST00000554685 CHST6Q9GZX3 395 aa12.03□□□□□ -0.48
SHOX2-206ENST00000554685 C12orf4Q9NQ89 552 aa12.03□□□□□ -0.48
SHOX2-206ENST00000554685 IFT46Q9NQC8 304 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms