RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 TNFRSF17Q02223 184 aa2.94□□□□□ -1.94
SYNE2-212ENST00000554584 SSPNQ14714 243 aa2.94□□□□□ -1.94
SYNE2-212ENST00000554584 FCN2Q15485 313 aa2.94□□□□□ -1.94
SYNE2-212ENST00000554584 RTL8BQ17RB0 113 aa2.94□□□□□ -1.94
SYNE2-212ENST00000554584 CMPK2Q5EBM0 449 aa2.94□□□□□ -1.94
SYNE2-212ENST00000554584 PACRGQ96M98 296 aaPredicted RBP2.94□□□□□ -1.94
SYNE2-212ENST00000554584 PIGMQ9H3S5 423 aa2.94□□□□□ -1.94
SYNE2-212ENST00000554584 ANKRD19PQ9H560 264 aa2.94□□□□□ -1.94
SYNE2-212ENST00000554584 SNAI2O43623 268 aa2.94□□□□□ -1.94
SYNE2-212ENST00000554584 SUB1P53999 127 aaKnown RBP eCLIP2.94□□□□□ -1.94
SYNE2-212ENST00000554584 IAH1Q2TAA2 248 aaPredicted RBP2.94□□□□□ -1.94
SYNE2-212ENST00000554584 HFEQ30201 348 aa2.94□□□□□ -1.94
SYNE2-212ENST00000554584 AGBL4Q5VU57 503 aa2.94□□□□□ -1.94
SYNE2-212ENST00000554584 C1orf140Q5VVS0 124 aa2.94□□□□□ -1.94
SYNE2-212ENST00000554584 SIAH3Q8IW03 269 aa2.94□□□□□ -1.94
SYNE2-212ENST00000554584 ZDHHC14Q8IZN3 488 aa2.94□□□□□ -1.94
SYNE2-212ENST00000554584 ADAMTS16Q8TE57 1224 aa2.94□□□□□ -1.94
SYNE2-212ENST00000554584 TMEM101Q96IK0 257 aa2.94□□□□□ -1.94
SYNE2-212ENST00000554584 KCNE3Q9Y6H6 103 aa2.94□□□□□ -1.94
SYNE2-212ENST00000554584 MBLAC1A4D2B0 266 aaPredicted RBP2.94□□□□□ -1.94
SYNE2-212ENST00000554584 PCBD1P61457 104 aa2.94□□□□□ -1.94
SYNE2-212ENST00000554584 RPS23P62266 143 aaKnown RBP2.94□□□□□ -1.94
SYNE2-212ENST00000554584 RPL30P62888 115 aaKnown RBP2.94□□□□□ -1.94
SYNE2-212ENST00000554584 PDZK1IP1Q13113 114 aa2.94□□□□□ -1.94
SYNE2-212ENST00000554584 PROX2Q3B8N5 592 aa2.94□□□□□ -1.94
SYNE2-212ENST00000554584 NOTCH2Q04721 2471 aa2.94□□□□□ -1.94
SYNE2-212ENST00000554584 GRIFINA4D1Z8 144 aa2.94□□□□□ -1.94
SYNE2-212ENST00000554584 A6NDN8 102 aa2.94□□□□□ -1.94
SYNE2-212ENST00000554584 NDUFS5O43920 106 aa2.94□□□□□ -1.94
SYNE2-212ENST00000554584 TMEM127O75204 238 aa2.94□□□□□ -1.94
SYNE2-212ENST00000554584 IMPA1P29218 277 aa2.94□□□□□ -1.94
SYNE2-212ENST00000554584 CLDN8P56748 225 aa2.94□□□□□ -1.94
SYNE2-212ENST00000554584 BPIFB3P59826 476 aa2.94□□□□□ -1.94
SYNE2-212ENST00000554584 ZNF154Q13106 437 aa2.94□□□□□ -1.94
SYNE2-212ENST00000554584 MPEG1Q2M385 716 aa2.94□□□□□ -1.94
SYNE2-212ENST00000554584 OR8I2Q8N0Y5 310 aa2.94□□□□□ -1.94
SYNE2-212ENST00000554584 MS4A15Q8N5U1 240 aa2.94□□□□□ -1.94
SYNE2-212ENST00000554584 FCRL1Q96LA6 429 aa2.94□□□□□ -1.94
SYNE2-212ENST00000554584 TBC1D29Q9UFV1 150 aa2.94□□□□□ -1.94
SYNE2-212ENST00000554584 ARHGAP23Q9P227 1491 aa2.94□□□□□ -1.94
SYNE2-212ENST00000554584 TYROBPO43914 113 aa2.94□□□□□ -1.94
SYNE2-212ENST00000554584 MPZL1O95297 269 aa2.94□□□□□ -1.94
SYNE2-212ENST00000554584 MT-ND4LP03901 98 aa2.94□□□□□ -1.94
SYNE2-212ENST00000554584 OSMP13725 252 aa2.94□□□□□ -1.94
SYNE2-212ENST00000554584 OR4F17Q8NGA8 305 aa2.94□□□□□ -1.94
SYNE2-212ENST00000554584 PELI2Q9HAT8 420 aa2.94□□□□□ -1.94
SYNE2-212ENST00000554584 OARD1Q9Y530 152 aa2.94□□□□□ -1.94
SYNE2-212ENST00000554584 TMPRSS2O15393 492 aa2.94□□□□□ -1.94
SYNE2-212ENST00000554584 KLF7O75840 302 aaPredicted RBP2.94□□□□□ -1.94
SYNE2-212ENST00000554584 ALX3O95076 343 aa2.94□□□□□ -1.94
SYNE2-212ENST00000554584 DAOP14920 347 aa2.94□□□□□ -1.94
SYNE2-212ENST00000554584 CCKARP32238 428 aa2.94□□□□□ -1.94
SYNE2-212ENST00000554584 MRPL43Q8N983 215 aaKnown RBP2.94□□□□□ -1.94
SYNE2-212ENST00000554584 IL21Q9HBE4 155 aa2.94□□□□□ -1.94
SYNE2-212ENST00000554584 ASCL3Q9NQ33 180 aa2.94□□□□□ -1.94
SYNE2-212ENST00000554584 C7orf72A4D263 438 aa2.94□□□□□ -1.94
SYNE2-212ENST00000554584 FIGNL2A6NMB9 653 aa2.94□□□□□ -1.94
SYNE2-212ENST00000554584 CD68P34810 354 aaPredicted RBP2.94□□□□□ -1.94
SYNE2-212ENST00000554584 SSTR5P35346 364 aa2.94□□□□□ -1.94
SYNE2-212ENST00000554584 FMODQ06828 376 aa2.94□□□□□ -1.94
SYNE2-212ENST00000554584 PABPC1L2AQ5JQF8 200 aa2.94□□□□□ -1.94
SYNE2-212ENST00000554584 FAM24BQ8N5W8 94 aa2.94□□□□□ -1.94
SYNE2-212ENST00000554584 ASB17Q8WXJ9 295 aa2.94□□□□□ -1.94
SYNE2-212ENST00000554584 UBE2E2Q96LR5 201 aa2.94□□□□□ -1.94
SYNE2-212ENST00000554584 CCL13Q99616 98 aa2.94□□□□□ -1.94
SYNE2-212ENST00000554584 TOLLIPQ9H0E2 274 aa2.94□□□□□ -1.94
SYNE2-212ENST00000554584 DMRT3Q9NQL9 472 aa2.94□□□□□ -1.94
SYNE2-212ENST00000554584 PCDH15Q96QU1 1955 aa2.94□□□□□ -1.94
SYNE2-212ENST00000554584 DUS4LO95620 317 aaKnown RBP2.93□□□□□ -1.94
SYNE2-212ENST00000554584 CLEC2AQ6UVW9 174 aa2.93□□□□□ -1.94
SYNE2-212ENST00000554584 SLC38A6Q8IZM9 456 aa2.93□□□□□ -1.94
SYNE2-212ENST00000554584 GNRHR2Q96P88 292 aa2.93□□□□□ -1.94
SYNE2-212ENST00000554584 SNED1Q8TER0 1413 aa2.93□□□□□ -1.94
SYNE2-212ENST00000554584 A0A096LPF7 62 aa2.93□□□□□ -1.94
SYNE2-212ENST00000554584 TMEM82A0PJX8 343 aa2.93□□□□□ -1.94
SYNE2-212ENST00000554584 GAGE10A6NGK3 116 aa2.93□□□□□ -1.94
SYNE2-212ENST00000554584 A6NIZ1 184 aa2.93□□□□□ -1.94
SYNE2-212ENST00000554584 INS-IGF2F8WCM5 200 aa2.93□□□□□ -1.94
SYNE2-212ENST00000554584 INSP01308 110 aa2.93□□□□□ -1.94
SYNE2-212ENST00000554584 TBXA2RP21731 343 aa2.93□□□□□ -1.94
SYNE2-212ENST00000554584 RAP1BP61224 184 aa2.93□□□□□ -1.94
SYNE2-212ENST00000554584 CDK5Q00535 292 aa2.93□□□□□ -1.94
SYNE2-212ENST00000554584 EMX1Q04741 257 aaPredicted RBP2.93□□□□□ -1.94
SYNE2-212ENST00000554584 BAK1Q16611 211 aa2.93□□□□□ -1.94
SYNE2-212ENST00000554584 C12orf54Q6X4T0 127 aa2.93□□□□□ -1.94
SYNE2-212ENST00000554584 SLC16A13Q7RTY0 426 aa2.93□□□□□ -1.94
SYNE2-212ENST00000554584 C1orf174Q8IYL3 243 aa2.93□□□□□ -1.94
SYNE2-212ENST00000554584 OR13F1Q8NGS4 319 aa2.93□□□□□ -1.94
SYNE2-212ENST00000554584 OR4C3Q8NH37 302 aa2.93□□□□□ -1.94
SYNE2-212ENST00000554584 ST6GALNAC6Q969X2 333 aa2.93□□□□□ -1.94
SYNE2-212ENST00000554584 SEMA4GQ9NTN9 838 aa2.93□□□□□ -1.94
SYNE2-212ENST00000554584 LOC285556D6RIA3 1793 aa2.93□□□□□ -1.94
SYNE2-212ENST00000554584 K7ERU9 68 aa2.93□□□□□ -1.94
SYNE2-212ENST00000554584 OR2T11Q8NH01 316 aa2.93□□□□□ -1.94
SYNE2-212ENST00000554584 RAB1BQ9H0U4 201 aa2.93□□□□□ -1.94
SYNE2-212ENST00000554584 OR6C3Q9NZP0 311 aa2.93□□□□□ -1.94
SYNE2-212ENST00000554584 TOPAZ1Q8N9V7 1692 aa2.93□□□□□ -1.94
SYNE2-212ENST00000554584 F8P00451 2351 aa2.93□□□□□ -1.94
SYNE2-212ENST00000554584 A0A0A6YYJ9 748 aa2.93□□□□□ -1.94
SYNE2-212ENST00000554584 TRBV4-1A0A0J9YWV2 114 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms