RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 SLAMF6Q96DU3 332 aa8.32□□□□□ -1.08
SIX4-202ENST00000554079 WDYHV1Q96HA8 205 aa8.32□□□□□ -1.08
SIX4-202ENST00000554079 SLC46A1Q96NT5 459 aa8.32□□□□□ -1.08
SIX4-202ENST00000554079 UHRF2Q96PU4 802 aa8.32□□□□□ -1.08
SIX4-202ENST00000554079 NRTNQ99748 197 aa8.32□□□□□ -1.08
SIX4-202ENST00000554079 ZNF665Q9H7R5 613 aa8.32□□□□□ -1.08
SIX4-202ENST00000554079 ZNF160Q9HCG1 818 aa8.32□□□□□ -1.08
SIX4-202ENST00000554079 RBPJLQ9UBG7 517 aa8.32□□□□□ -1.08
SIX4-202ENST00000554079 FBLN5Q9UBX5 448 aa8.32□□□□□ -1.08
SIX4-202ENST00000554079 TAC3Q9UHF0 121 aa8.32□□□□□ -1.08
SIX4-202ENST00000554079 CDC42EP3Q9UKI2 254 aa8.32□□□□□ -1.08
SIX4-202ENST00000554079 TRAV34A0A0B4J273 112 aa8.32□□□□□ -1.08
SIX4-202ENST00000554079 MANSC4A6NHS7 340 aaPredicted RBP8.32□□□□□ -1.08
SIX4-202ENST00000554079 ZFP92A6NM28 416 aa8.32□□□□□ -1.08
SIX4-202ENST00000554079 TMEM14DPA8MWL7 114 aa8.32□□□□□ -1.08
SIX4-202ENST00000554079 GDF9O60383 454 aa8.32□□□□□ -1.08
SIX4-202ENST00000554079 LMX1BO60663 402 aa8.32□□□□□ -1.08
SIX4-202ENST00000554079 GOSR1O95249 250 aa8.32□□□□□ -1.08
SIX4-202ENST00000554079 HIST1H1DP16402 221 aaKnown RBP8.32□□□□□ -1.08
SIX4-202ENST00000554079 AMY2BP19961 511 aa8.32□□□□□ -1.08
SIX4-202ENST00000554079 AADACP22760 399 aa8.32□□□□□ -1.08
SIX4-202ENST00000554079 DNASE1L1P49184 302 aa8.32□□□□□ -1.08
SIX4-202ENST00000554079 FLT3LGP49771 235 aa8.32□□□□□ -1.08
SIX4-202ENST00000554079 SUMO1P63165 101 aaKnown RBP8.32□□□□□ -1.08
SIX4-202ENST00000554079 ARG2P78540 354 aa8.32□□□□□ -1.08
SIX4-202ENST00000554079 LCN2P80188 198 aa8.32□□□□□ -1.08
SIX4-202ENST00000554079 AMZ2Q86W34 360 aa8.32□□□□□ -1.08
SIX4-202ENST00000554079 FAM89BQ8N5H3 189 aa8.32□□□□□ -1.08
SIX4-202ENST00000554079 LRRC75AQ8NAA5 344 aa8.32□□□□□ -1.08
SIX4-202ENST00000554079 OR52M1Q8NGK5 317 aa8.32□□□□□ -1.08
SIX4-202ENST00000554079 OTOSQ8NHW6 89 aa8.32□□□□□ -1.08
SIX4-202ENST00000554079 FAM216AQ8WUB2 273 aa8.32□□□□□ -1.08
SIX4-202ENST00000554079 GNPNAT1Q96EK6 184 aaPredicted RBP8.32□□□□□ -1.08
SIX4-202ENST00000554079 VN1R1Q9GZP7 353 aa8.32□□□□□ -1.08
SIX4-202ENST00000554079 SRA1Q9HD15 236 aaKnown RBP8.32□□□□□ -1.08
SIX4-202ENST00000554079 SLC35D1Q9NTN3 355 aa8.32□□□□□ -1.08
SIX4-202ENST00000554079 TRAPPC1Q9Y5R8 145 aa8.32□□□□□ -1.08
SIX4-202ENST00000554079 TMEM14AQ9Y6G1 99 aa8.32□□□□□ -1.08
SIX4-202ENST00000554079 SCN3AQ9NY46 2000 aa8.31□□□□□ -1.08
SIX4-202ENST00000554079 FAM24AA6NFZ4 105 aa8.31□□□□□ -1.08
SIX4-202ENST00000554079 LRRC3CA6NJW4 275 aa8.31□□□□□ -1.08
SIX4-202ENST00000554079 ZNF891A8MT65 544 aaPredicted RBP8.31□□□□□ -1.08
SIX4-202ENST00000554079 SERPINE3A8MV23 424 aa8.31□□□□□ -1.08
SIX4-202ENST00000554079 K7EQS6 105 aa8.31□□□□□ -1.08
SIX4-202ENST00000554079 M0R296 226 aa8.31□□□□□ -1.08
SIX4-202ENST00000554079 SOX1O00570 391 aaPredicted RBP8.31□□□□□ -1.08
SIX4-202ENST00000554079 SAP30O75446 220 aa8.31□□□□□ -1.08
SIX4-202ENST00000554079 MPZL1O95297 269 aa8.31□□□□□ -1.08
SIX4-202ENST00000554079 H2BFMP0C1H6 154 aa8.31□□□□□ -1.08
SIX4-202ENST00000554079 ADMP35318 185 aa8.31□□□□□ -1.08
SIX4-202ENST00000554079 RUNX1Q01196 453 aa8.31□□□□□ -1.08
SIX4-202ENST00000554079 VGLL4Q14135 290 aa8.31□□□□□ -1.08
SIX4-202ENST00000554079 MEP1BQ16820 701 aa8.31□□□□□ -1.08
SIX4-202ENST00000554079 DCST2Q5T1A1 773 aa8.31□□□□□ -1.08
SIX4-202ENST00000554079 C1orf140Q5VVS0 124 aa8.31□□□□□ -1.08
SIX4-202ENST00000554079 TMEM144Q7Z5S9 345 aa8.31□□□□□ -1.08
SIX4-202ENST00000554079 OR5AU1Q8NGC0 362 aa8.31□□□□□ -1.08
SIX4-202ENST00000554079 ANAPC16Q96DE5 110 aa8.31□□□□□ -1.08
SIX4-202ENST00000554079 SMIM7Q9BQ49 75 aa8.31□□□□□ -1.08
SIX4-202ENST00000554079 SLC46A2Q9BY10 475 aa8.31□□□□□ -1.08
SIX4-202ENST00000554079 CPAMD8Q8IZJ3 1885 aa8.31□□□□□ -1.08
SIX4-202ENST00000554079 H7C1C5 153 aa8.3□□□□□ -1.08
SIX4-202ENST00000554079 TAX1BP3O14907 124 aa8.3□□□□□ -1.08
SIX4-202ENST00000554079 ST8SIA3O43173 380 aa8.3□□□□□ -1.08
SIX4-202ENST00000554079 CLEC3AO75596 197 aa8.3□□□□□ -1.08
SIX4-202ENST00000554079 KBTBD11O94819 623 aa8.3□□□□□ -1.08
SIX4-202ENST00000554079 PPIAL4GP0DN37 164 aa8.3□□□□□ -1.08
SIX4-202ENST00000554079 ERGP11308 486 aa8.3□□□□□ -1.08
SIX4-202ENST00000554079 GNRHRP30968 328 aa8.3□□□□□ -1.08
SIX4-202ENST00000554079 EMP2P54851 167 aa8.3□□□□□ -1.08
SIX4-202ENST00000554079 LCN6P62502 163 aa8.3□□□□□ -1.08
SIX4-202ENST00000554079 BTN3A2P78410 334 aa8.3□□□□□ -1.08
SIX4-202ENST00000554079 SQSTM1Q13501 440 aa8.3□□□□□ -1.08
SIX4-202ENST00000554079 TMEM187Q14656 261 aa8.3□□□□□ -1.08
SIX4-202ENST00000554079 LRRC10Q5BKY1 277 aa8.3□□□□□ -1.08
SIX4-202ENST00000554079 Q6ZVL8 140 aa8.3□□□□□ -1.08
SIX4-202ENST00000554079 ERASQ7Z444 233 aa8.3□□□□□ -1.08
SIX4-202ENST00000554079 OR2C3Q8N628 320 aa8.3□□□□□ -1.08
SIX4-202ENST00000554079 CADM4Q8NFZ8 388 aa8.3□□□□□ -1.08
SIX4-202ENST00000554079 ZNF596Q8TC21 504 aa8.3□□□□□ -1.08
SIX4-202ENST00000554079 STARD4Q96DR4 205 aa8.3□□□□□ -1.08
SIX4-202ENST00000554079 LMF2Q9BU23 707 aaKnown RBP8.3□□□□□ -1.08
SIX4-202ENST00000554079 PARLQ9H300 379 aa8.3□□□□□ -1.08
SIX4-202ENST00000554079 SERTM2A0A1B0GWG4 89 aa8.3□□□□□ -1.08
SIX4-202ENST00000554079 ODAMA1E959 279 aa8.3□□□□□ -1.08
SIX4-202ENST00000554079 GRIFINA4D1Z8 144 aa8.3□□□□□ -1.08
SIX4-202ENST00000554079 IGLON5A6NGN9 336 aa8.3□□□□□ -1.08
SIX4-202ENST00000554079 FAM166BA8MTA8 275 aa8.3□□□□□ -1.08
SIX4-202ENST00000554079 B4DGG1 531 aa8.3□□□□□ -1.08
SIX4-202ENST00000554079 DIRC3C9JPN6 131 aa8.3□□□□□ -1.08
SIX4-202ENST00000554079 SOCS1O15524 211 aa8.3□□□□□ -1.08
SIX4-202ENST00000554079 GALR2O43603 387 aaPredicted RBP8.3□□□□□ -1.08
SIX4-202ENST00000554079 RAMP3O60896 148 aa8.3□□□□□ -1.08
SIX4-202ENST00000554079 SRSF10O75494 262 aaKnown RBP8.3□□□□□ -1.08
SIX4-202ENST00000554079 SERF1AO75920 110 aa8.3□□□□□ -1.08
SIX4-202ENST00000554079 STATHP02808 62 aa8.3□□□□□ -1.08
SIX4-202ENST00000554079 HIST1H1TP22492 207 aaPredicted RBP8.3□□□□□ -1.08
SIX4-202ENST00000554079 GABRA3P34903 492 aa8.3□□□□□ -1.08
SIX4-202ENST00000554079 EMDP50402 254 aa8.3□□□□□ -1.08
SIX4-202ENST00000554079 TAS2R46P59540 309 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms