RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 FAM71F1Q96KD3 344 aaPredicted RBP7.34□□□□□ -1.23
TDP1-208ENST00000553989 TSSK2Q96PF2 358 aa7.34□□□□□ -1.23
TDP1-208ENST00000553989 PPIL3Q9H2H8 161 aaKnown RBP7.34□□□□□ -1.23
TDP1-208ENST00000553989 FN3KRPQ9HA64 309 aa7.34□□□□□ -1.23
TDP1-208ENST00000553989 C1RLQ9NZP8 487 aa7.34□□□□□ -1.23
TDP1-208ENST00000553989 VSX1Q9NZR4 365 aaPredicted RBP7.34□□□□□ -1.23
TDP1-208ENST00000553989 ETV7Q9Y603 341 aa7.34□□□□□ -1.23
TDP1-208ENST00000553989 MEIKINA0A087WXM9 373 aa7.33□□□□□ -1.24
TDP1-208ENST00000553989 hCG_1807616A0A1W2PRN6 198 aa7.33□□□□□ -1.24
TDP1-208ENST00000553989 SMIM30A4D0T7 59 aa7.33□□□□□ -1.24
TDP1-208ENST00000553989 A6NLC8 198 aa7.33□□□□□ -1.24
TDP1-208ENST00000553989 GABARAPH6UMI1 98 aa7.33□□□□□ -1.24
TDP1-208ENST00000553989 P2RY10O00398 339 aa7.33□□□□□ -1.24
TDP1-208ENST00000553989 ADAM20O43506 726 aa7.33□□□□□ -1.24
TDP1-208ENST00000553989 NOS1APO75052 506 aaPredicted RBP7.33□□□□□ -1.24
TDP1-208ENST00000553989 NDUFA7O95182 113 aa7.33□□□□□ -1.24
TDP1-208ENST00000553989 RENP00797 406 aa7.33□□□□□ -1.24
TDP1-208ENST00000553989 MELTFP08582 738 aa7.33□□□□□ -1.24
TDP1-208ENST00000553989 MRPL3P09001 348 aaKnown RBP7.33□□□□□ -1.24
TDP1-208ENST00000553989 HIST1H1CP16403 213 aaKnown RBP7.33□□□□□ -1.24
TDP1-208ENST00000553989 SPI1P17947 270 aa7.33□□□□□ -1.24
TDP1-208ENST00000553989 PMELP40967 661 aa7.33□□□□□ -1.24
TDP1-208ENST00000553989 GATA4P43694 442 aa7.33□□□□□ -1.24
TDP1-208ENST00000553989 EGR3Q06889 387 aa7.33□□□□□ -1.24
TDP1-208ENST00000553989 GK2Q14410 553 aaPredicted RBP7.33□□□□□ -1.24
TDP1-208ENST00000553989 FAM220AQ7Z4H9 259 aa7.33□□□□□ -1.24
TDP1-208ENST00000553989 NR2C2APQ86WQ0 139 aa7.33□□□□□ -1.24
TDP1-208ENST00000553989 PDZD9Q8IXQ8 264 aa7.33□□□□□ -1.24
TDP1-208ENST00000553989 TMEM86BQ8N661 226 aa7.33□□□□□ -1.24
TDP1-208ENST00000553989 PNLDC1Q8NA58 520 aaKnown RBP7.33□□□□□ -1.24
TDP1-208ENST00000553989 CYB561A3Q8NBI2 242 aa7.33□□□□□ -1.24
TDP1-208ENST00000553989 OR2T4Q8NH00 348 aa7.33□□□□□ -1.24
TDP1-208ENST00000553989 SMIM4Q8WVI0 70 aa7.33□□□□□ -1.24
TDP1-208ENST00000553989 SSMEM1Q8WWF3 244 aa7.33□□□□□ -1.24
TDP1-208ENST00000553989 LHX4Q969G2 390 aa7.33□□□□□ -1.24
TDP1-208ENST00000553989 ERGIC1Q969X5 290 aa7.33□□□□□ -1.24
TDP1-208ENST00000553989 DACT3Q96B18 629 aaPredicted RBP7.33□□□□□ -1.24
TDP1-208ENST00000553989 ANAPC16Q96DE5 110 aa7.33□□□□□ -1.24
TDP1-208ENST00000553989 ADAT1Q9BUB4 502 aaKnown RBP7.33□□□□□ -1.24
TDP1-208ENST00000553989 GPN1Q9HCN4 374 aaPredicted RBP7.33□□□□□ -1.24
TDP1-208ENST00000553989 TAS2R8Q9NYW2 309 aa7.33□□□□□ -1.24
TDP1-208ENST00000553989 RNF7Q9UBF6 113 aa7.33□□□□□ -1.24
TDP1-208ENST00000553989 SCP2D1Q9UJQ7 156 aa7.33□□□□□ -1.24
TDP1-208ENST00000553989 GNG8Q9UK08 70 aa7.33□□□□□ -1.24
TDP1-208ENST00000553989 NOP16Q9Y3C1 178 aaKnown RBP7.33□□□□□ -1.24
TDP1-208ENST00000553989 RNF114Q9Y508 228 aa7.33□□□□□ -1.24
TDP1-208ENST00000553989 HSPB11Q9Y547 144 aa7.33□□□□□ -1.24
TDP1-208ENST00000553989 LHFPL6Q9Y693 200 aa7.33□□□□□ -1.24
TDP1-208ENST00000553989 POMT1Q9Y6A1 747 aa7.33□□□□□ -1.24
TDP1-208ENST00000553989 V9GY05 133 aa7.33□□□□□ -1.24
TDP1-208ENST00000553989 TRAV38-1A0A0B4J264 116 aa7.32□□□□□ -1.24
TDP1-208ENST00000553989 BTBD17A6NE02 478 aa7.32□□□□□ -1.24
TDP1-208ENST00000553989 GGT3PA6NGU5 568 aa7.32□□□□□ -1.24
TDP1-208ENST00000553989 IFITM5A6NNB3 132 aa7.32□□□□□ -1.24
TDP1-208ENST00000553989 AIPO00170 330 aa7.32□□□□□ -1.24
TDP1-208ENST00000553989 LGALS8O00214 317 aa7.32□□□□□ -1.24
TDP1-208ENST00000553989 FABP7O15540 132 aa7.32□□□□□ -1.24
TDP1-208ENST00000553989 FSTL3O95633 263 aa7.32□□□□□ -1.24
TDP1-208ENST00000553989 PAHP00439 452 aa7.32□□□□□ -1.24
TDP1-208ENST00000553989 IFNA7P01567 189 aa7.32□□□□□ -1.24
TDP1-208ENST00000553989 IL5P05113 134 aa7.32□□□□□ -1.24
TDP1-208ENST00000553989 LIPFP07098 398 aa7.32□□□□□ -1.24
TDP1-208ENST00000553989 ACSM4P0C7M7 580 aa7.32□□□□□ -1.24
TDP1-208ENST00000553989 SULT1A3P0DMM9 295 aa7.32□□□□□ -1.24
TDP1-208ENST00000553989 SULT1A4P0DMN0 295 aa7.32□□□□□ -1.24
TDP1-208ENST00000553989 ATF1P18846 271 aa7.32□□□□□ -1.24
TDP1-208ENST00000553989 CA6P23280 308 aa7.32□□□□□ -1.24
TDP1-208ENST00000553989 FAUP35544 74 aaKnown RBP7.32□□□□□ -1.24
TDP1-208ENST00000553989 CD200P41217 278 aa7.32□□□□□ -1.24
TDP1-208ENST00000553989 CDKN2AP42771 156 aaKnown RBP7.32□□□□□ -1.24
TDP1-208ENST00000553989 RPS11P62280 158 aaKnown RBP eCLIP7.32□□□□□ -1.24
TDP1-208ENST00000553989 HOXA4Q00056 320 aaPredicted RBP7.32□□□□□ -1.24
TDP1-208ENST00000553989 SSBP1Q04837 148 aaKnown RBP7.32□□□□□ -1.24
TDP1-208ENST00000553989 ECH1Q13011 328 aa7.32□□□□□ -1.24
TDP1-208ENST00000553989 KLF9Q13886 244 aaPredicted RBP7.32□□□□□ -1.24
TDP1-208ENST00000553989 INSL4Q14641 139 aa7.32□□□□□ -1.24
TDP1-208ENST00000553989 FCN2Q15485 313 aa7.32□□□□□ -1.24
TDP1-208ENST00000553989 MPPED2Q15777 294 aa7.32□□□□□ -1.24
TDP1-208ENST00000553989 KCNMB1Q16558 191 aa7.32□□□□□ -1.24
TDP1-208ENST00000553989 TP53I3Q53FA7 332 aa7.32□□□□□ -1.24
TDP1-208ENST00000553989 ZNF684Q5T5D7 378 aa7.32□□□□□ -1.24
TDP1-208ENST00000553989 LYPD4Q6UWN0 246 aa7.32□□□□□ -1.24
TDP1-208ENST00000553989 ZNF841Q6ZN19 808 aa7.32□□□□□ -1.24
TDP1-208ENST00000553989 CFAP77Q6ZQR2 320 aa7.32□□□□□ -1.24
TDP1-208ENST00000553989 Q8TCH9 128 aa7.32□□□□□ -1.24
TDP1-208ENST00000553989 ASB17Q8WXJ9 295 aa7.32□□□□□ -1.24
TDP1-208ENST00000553989 ASB13Q8WXK3 278 aa7.32□□□□□ -1.24
TDP1-208ENST00000553989 DYRK2Q92630 601 aa7.32□□□□□ -1.24
TDP1-208ENST00000553989 SNAPC3Q92966 411 aa7.32□□□□□ -1.24
TDP1-208ENST00000553989 NMNAT3Q96T66 252 aa7.32□□□□□ -1.24
TDP1-208ENST00000553989 CITED1Q99966 193 aa7.32□□□□□ -1.24
TDP1-208ENST00000553989 TCF7L1Q9HCS4 588 aa7.32□□□□□ -1.24
TDP1-208ENST00000553989 CTSZQ9UBR2 303 aa7.32□□□□□ -1.24
TDP1-208ENST00000553989 ZNF222Q9UK12 451 aa7.32□□□□□ -1.24
TDP1-208ENST00000553989 MRPS7Q9Y2R9 242 aaKnown RBP7.32□□□□□ -1.24
TDP1-208ENST00000553989 FAM96BQ9Y3D0 163 aa7.32□□□□□ -1.24
TDP1-208ENST00000553989 TRRAPQ9Y4A5 3859 aa7.31□□□□□ -1.24
TDP1-208ENST00000553989 IGHV1-69DA0A0B4J2H0 117 aa7.31□□□□□ -1.24
TDP1-208ENST00000553989 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.31□□□□□ -1.24
TDP1-208ENST00000553989 CENPVL3A0A0U1RRI6 287 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms