RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 OR52P1PQ8NH57 321 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 OR10G6Q8NH81 332 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 MFSD8Q8NHS3 518 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 PHOSPHO2Q8TCD6 241 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 PIFOQ8TCI5 191 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 DTD1Q8TEA8 209 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 CASTOR1Q8WTX7 329 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 RNF138Q8WVD3 245 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 TWIST2Q8WVJ9 160 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 PPCDCQ96CD2 204 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 TLCD1Q96CP7 247 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 FXYD5Q96DB9 178 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 SEH1LQ96EE3 360 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 SNF8Q96H20 258 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 TMEM101Q96IK0 257 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 KCNS1Q96KK3 526 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 BIRC8Q96P09 236 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 TAAR1Q96RJ0 339 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 PLEKHF1Q96S99 279 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 CDX2Q99626 313 aaPredicted RBP1.59□□□□□ -2.15
SRP54-204ENST00000553923 EBNA1BP2Q99848 306 aaKnown RBP1.59□□□□□ -2.15
SRP54-204ENST00000553923 SUCNR1Q9BXA5 334 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 PECRQ9BY49 303 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 MROQ9BYG7 248 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 SLC22A4Q9H015 551 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 PARP12Q9H0J9 701 aaKnown RBP1.59□□□□□ -2.15
SRP54-204ENST00000553923 OR51E2Q9H255 320 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 CDC42EP4Q9H3Q1 356 aaKnown RBP1.59□□□□□ -2.15
SRP54-204ENST00000553923 WFDC1Q9HC57 220 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.59□□□□□ -2.15
SRP54-204ENST00000553923 GID8Q9NWU2 228 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 OPN4Q9UHM6 478 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 PRO0628Q9UI54 55 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 INSIG2Q9Y5U4 225 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 ZNF780BQ9Y6R6 833 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 V9GYQ6 96 aa1.59□□□□□ -2.15
SRP54-204ENST00000553923 ASTN1O14525 1302 aa1.59□□□□□ -2.16
SRP54-204ENST00000553923 PLEKHG1Q9ULL1 1385 aa1.59□□□□□ -2.16
SRP54-204ENST00000553923 NPHP4O75161 1426 aaPredicted RBP1.58□□□□□ -2.16
SRP54-204ENST00000553923 ZFYVE9O95405 1425 aa1.58□□□□□ -2.16
SRP54-204ENST00000553923 C9orf84Q5VXU9 1444 aa1.58□□□□□ -2.16
SRP54-204ENST00000553923 IGKV1-27A0A075B6S5 117 aa1.58□□□□□ -2.16
SRP54-204ENST00000553923 IGHV3-74A0A0B4J1X5 117 aa1.58□□□□□ -2.16
SRP54-204ENST00000553923 A0A0G2JMP0 313 aa1.58□□□□□ -2.16
SRP54-204ENST00000553923 KLF18A0A0U1RQI7 1052 aa1.58□□□□□ -2.16
SRP54-204ENST00000553923 A0A0X1KG70 313 aa1.58□□□□□ -2.16
SRP54-204ENST00000553923 LOC389332A0A1B0GUA5 103 aa1.58□□□□□ -2.16
SRP54-204ENST00000553923 ZFP92A6NM28 416 aa1.58□□□□□ -2.16
SRP54-204ENST00000553923 EVPLLA8MZ36 301 aa1.58□□□□□ -2.16
SRP54-204ENST00000553923 PSMD12O00232 456 aaPredicted RBP1.58□□□□□ -2.16
SRP54-204ENST00000553923 PGRMC1O00264 195 aaKnown RBP1.58□□□□□ -2.16
SRP54-204ENST00000553923 UPK2O00526 184 aa1.58□□□□□ -2.16
SRP54-204ENST00000553923 MFNGO00587 321 aa1.58□□□□□ -2.16
SRP54-204ENST00000553923 TAAR5O14804 337 aa1.58□□□□□ -2.16
SRP54-204ENST00000553923 PSPHP1O15172 72 aa1.58□□□□□ -2.16
SRP54-204ENST00000553923 CCDC22O60826 627 aa1.58□□□□□ -2.16
SRP54-204ENST00000553923 FOXH1O75593 365 aa1.58□□□□□ -2.16
SRP54-204ENST00000553923 OR2A4O95047 310 aa1.58□□□□□ -2.16
SRP54-204ENST00000553923 KCNK2O95069 426 aa1.58□□□□□ -2.16
SRP54-204ENST00000553923 MT-ND4P03905 459 aa1.58□□□□□ -2.16
SRP54-204ENST00000553923 CTSLP07711 333 aa1.58□□□□□ -2.16
SRP54-204ENST00000553923 C8orf88P0DMB2 117 aa1.58□□□□□ -2.16
SRP54-204ENST00000553923 HIST1H1EP10412 219 aaKnown RBP1.58□□□□□ -2.16
SRP54-204ENST00000553923 ZNF19P17023 458 aa1.58□□□□□ -2.16
SRP54-204ENST00000553923 PRPS1L1P21108 318 aa1.58□□□□□ -2.16
SRP54-204ENST00000553923 ME2P23368 584 aa1.58□□□□□ -2.16
SRP54-204ENST00000553923 CFL1P23528 166 aaKnown RBP1.58□□□□□ -2.16
SRP54-204ENST00000553923 S100A2P29034 98 aa1.58□□□□□ -2.16
SRP54-204ENST00000553923 AGTR1P30556 359 aa1.58□□□□□ -2.16
SRP54-204ENST00000553923 CCR7P32248 378 aa1.58□□□□□ -2.16
SRP54-204ENST00000553923 POLR2IP36954 125 aaKnown RBP1.58□□□□□ -2.16
SRP54-204ENST00000553923 MAGEA12P43365 314 aa1.58□□□□□ -2.16
SRP54-204ENST00000553923 NMUP48645 174 aa1.58□□□□□ -2.16
SRP54-204ENST00000553923 MEOX2P50222 304 aa1.58□□□□□ -2.16
SRP54-204ENST00000553923 ERFP50548 548 aa1.58□□□□□ -2.16
SRP54-204ENST00000553923 IDH3GP51553 393 aaPredicted RBP1.58□□□□□ -2.16
SRP54-204ENST00000553923 RAP1AP62834 184 aa1.58□□□□□ -2.16
SRP54-204ENST00000553923 SLC35A2P78381 396 aa1.58□□□□□ -2.16
SRP54-204ENST00000553923 CCL7P80098 99 aa1.58□□□□□ -2.16
SRP54-204ENST00000553923 FAM3AP98173 230 aa1.58□□□□□ -2.16
SRP54-204ENST00000553923 ZNF235Q14590 738 aa1.58□□□□□ -2.16
SRP54-204ENST00000553923 ATP6AP1LQ52LC2 224 aa1.58□□□□□ -2.16
SRP54-204ENST00000553923 TMEM255AQ5JRV8 349 aa1.58□□□□□ -2.16
SRP54-204ENST00000553923 CASC10Q5T4H9 136 aa1.58□□□□□ -2.16
SRP54-204ENST00000553923 KCTD16Q68DU8 428 aa1.58□□□□□ -2.16
SRP54-204ENST00000553923 OR10K2Q6IF99 312 aa1.58□□□□□ -2.16
SRP54-204ENST00000553923 TNFAIP8L2Q6P589 184 aaPredicted RBP1.58□□□□□ -2.16
SRP54-204ENST00000553923 FAM131AQ6UXB0 335 aa1.58□□□□□ -2.16
SRP54-204ENST00000553923 SPNS3Q6ZMD2 512 aa1.58□□□□□ -2.16
SRP54-204ENST00000553923 OLIG3Q7RTU3 272 aa1.58□□□□□ -2.16
SRP54-204ENST00000553923 FAM19A5Q7Z5A7 132 aaPredicted RBP1.58□□□□□ -2.16
SRP54-204ENST00000553923 CAMK2N1Q7Z7J9 78 aa1.58□□□□□ -2.16
SRP54-204ENST00000553923 PRNTQ86SH4 94 aa1.58□□□□□ -2.16
SRP54-204ENST00000553923 GALNT10Q86SR1 603 aa1.58□□□□□ -2.16
SRP54-204ENST00000553923 NAA40Q86UY6 237 aa1.58□□□□□ -2.16
SRP54-204ENST00000553923 CEND1Q8N111 149 aa1.58□□□□□ -2.16
SRP54-204ENST00000553923 DRAM1Q8N682 238 aa1.58□□□□□ -2.16
SRP54-204ENST00000553923 DCAF4L2Q8NA75 395 aa1.58□□□□□ -2.16
SRP54-204ENST00000553923 SLC26A10Q8NG04 563 aa1.58□□□□□ -2.16
SRP54-204ENST00000553923 NPBQ8NG41 125 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms