RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 FAM192AQ9GZU8 254 aa6.9□□□□□ -1.3
PSEN1-209ENST00000553855 FAM234AQ9H0X4 552 aa6.9□□□□□ -1.3
PSEN1-209ENST00000553855 EXOSC4Q9NPD3 245 aaKnown RBP6.9□□□□□ -1.3
PSEN1-209ENST00000553855 TMEM138Q9NPI0 162 aa6.9□□□□□ -1.3
PSEN1-209ENST00000553855 PAK1IP1Q9NWT1 392 aaPredicted RBP6.9□□□□□ -1.3
PSEN1-209ENST00000553855 OPN4Q9UHM6 478 aa6.9□□□□□ -1.3
PSEN1-209ENST00000553855 RRP15Q9Y3B9 282 aaKnown RBP6.9□□□□□ -1.3
PSEN1-209ENST00000553855 KPTNQ9Y664 436 aa6.9□□□□□ -1.3
PSEN1-209ENST00000553855 FN1P02751 2386 aaKnown RBP6.89□□□□□ -1.31
PSEN1-209ENST00000553855 IGKV1D-17A0A075B6S4 117 aa6.89□□□□□ -1.31
PSEN1-209ENST00000553855 IGKV1-9A0A0C4DH69 117 aa6.89□□□□□ -1.31
PSEN1-209ENST00000553855 SH2D1BO14796 132 aa6.89□□□□□ -1.31
PSEN1-209ENST00000553855 SPRY1O43609 319 aaPredicted RBP6.89□□□□□ -1.31
PSEN1-209ENST00000553855 MPIG6BO95866 241 aa6.89□□□□□ -1.31
PSEN1-209ENST00000553855 HAND1O96004 215 aa6.89□□□□□ -1.31
PSEN1-209ENST00000553855 CSTBP04080 98 aaKnown RBP6.89□□□□□ -1.31
PSEN1-209ENST00000553855 CD1AP06126 327 aa6.89□□□□□ -1.31
PSEN1-209ENST00000553855 HSMCR30P0CW71 290 aa6.89□□□□□ -1.31
PSEN1-209ENST00000553855 ZNF44P15621 663 aa6.89□□□□□ -1.31
PSEN1-209ENST00000553855 GABRR1P24046 479 aa6.89□□□□□ -1.31
PSEN1-209ENST00000553855 BDKRB2P30411 391 aa6.89□□□□□ -1.31
PSEN1-209ENST00000553855 SNU13P55769 128 aaKnown RBP6.89□□□□□ -1.31
PSEN1-209ENST00000553855 EDDM3BP56851 147 aa6.89□□□□□ -1.31
PSEN1-209ENST00000553855 ERVFRD-1P60508 538 aa6.89□□□□□ -1.31
PSEN1-209ENST00000553855 RSU1Q15404 277 aa6.89□□□□□ -1.31
PSEN1-209ENST00000553855 SPHARQ15513 63 aa6.89□□□□□ -1.31
PSEN1-209ENST00000553855 KISS1Q15726 138 aa6.89□□□□□ -1.31
PSEN1-209ENST00000553855 DGUOKQ16854 277 aa6.89□□□□□ -1.31
PSEN1-209ENST00000553855 SPIN3Q5JUX0 258 aa6.89□□□□□ -1.31
PSEN1-209ENST00000553855 DMKNQ6E0U4 476 aaPredicted RBP6.89□□□□□ -1.31
PSEN1-209ENST00000553855 USP43Q70EL4 1123 aa6.89□□□□□ -1.31
PSEN1-209ENST00000553855 KIR3DL3Q8N743 410 aa6.89□□□□□ -1.31
PSEN1-209ENST00000553855 ZFP41Q8N8Y5 198 aa6.89□□□□□ -1.31
PSEN1-209ENST00000553855 OR5D18Q8NGL1 313 aa6.89□□□□□ -1.31
PSEN1-209ENST00000553855 TNFAIP8L1Q8WVP5 186 aa6.89□□□□□ -1.31
PSEN1-209ENST00000553855 UFD1Q92890 307 aa6.89□□□□□ -1.31
PSEN1-209ENST00000553855 SPACA5Q96QH8 159 aa6.89□□□□□ -1.31
PSEN1-209ENST00000553855 ZNF184Q99676 751 aaPredicted RBP6.89□□□□□ -1.31
PSEN1-209ENST00000553855 CDCA4Q9BXL8 241 aa6.89□□□□□ -1.31
PSEN1-209ENST00000553855 SLITRK2Q9H156 845 aa6.89□□□□□ -1.31
PSEN1-209ENST00000553855 METTL9Q9H1A3 318 aa6.89□□□□□ -1.31
PSEN1-209ENST00000553855 HES4Q9HCC6 221 aa6.89□□□□□ -1.31
PSEN1-209ENST00000553855 TAS2R4Q9NYW5 299 aa6.89□□□□□ -1.31
PSEN1-209ENST00000553855 MTCH1Q9NZJ7 389 aa6.89□□□□□ -1.31
PSEN1-209ENST00000553855 ING4Q9UNL4 249 aa6.89□□□□□ -1.31
PSEN1-209ENST00000553855 GSTK1Q9Y2Q3 226 aa6.89□□□□□ -1.31
PSEN1-209ENST00000553855 FAM96BQ9Y3D0 163 aa6.89□□□□□ -1.31
PSEN1-209ENST00000553855 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.89□□□□□ -1.31
PSEN1-209ENST00000553855 ZANQ9Y493 2812 aa6.88□□□□□ -1.31
PSEN1-209ENST00000553855 IGKV1-27A0A075B6S5 117 aa6.88□□□□□ -1.31
PSEN1-209ENST00000553855 IGHV3OR16-10A0A075B7F0 116 aa6.88□□□□□ -1.31
PSEN1-209ENST00000553855 A0A1B0GW55 424 aa6.88□□□□□ -1.31
PSEN1-209ENST00000553855 M0R1W7 72 aa6.88□□□□□ -1.31
PSEN1-209ENST00000553855 ANGPTL7O43827 346 aa6.88□□□□□ -1.31
PSEN1-209ENST00000553855 ZNF780AO75290 641 aaPredicted RBP6.88□□□□□ -1.31
PSEN1-209ENST00000553855 TUSC2O75896 110 aa6.88□□□□□ -1.31
PSEN1-209ENST00000553855 TK1P04183 234 aa6.88□□□□□ -1.31
PSEN1-209ENST00000553855 ALDOBP05062 364 aa6.88□□□□□ -1.31
PSEN1-209ENST00000553855 DUX4L2P0CJ85 424 aa6.88□□□□□ -1.31
PSEN1-209ENST00000553855 DUX4L3P0CJ86 424 aa6.88□□□□□ -1.31
PSEN1-209ENST00000553855 DUX4L4P0CJ87 422 aa6.88□□□□□ -1.31
PSEN1-209ENST00000553855 DUX4L5P0CJ88 424 aa6.88□□□□□ -1.31
PSEN1-209ENST00000553855 DUX4L6P0CJ89 424 aa6.88□□□□□ -1.31
PSEN1-209ENST00000553855 DUX4L7P0CJ90 424 aa6.88□□□□□ -1.31
PSEN1-209ENST00000553855 BCL3P20749 454 aa6.88□□□□□ -1.31
PSEN1-209ENST00000553855 ZNF93P35789 620 aaPredicted RBP6.88□□□□□ -1.31
PSEN1-209ENST00000553855 TGFBR2P37173 567 aa6.88□□□□□ -1.31
PSEN1-209ENST00000553855 RANBP1P43487 201 aa6.88□□□□□ -1.31
PSEN1-209ENST00000553855 ERVK11-1P61568 191 aa6.88□□□□□ -1.31
PSEN1-209ENST00000553855 RPL31P62899 125 aaKnown RBP6.88□□□□□ -1.31
PSEN1-209ENST00000553855 PAX2Q02962 417 aa6.88□□□□□ -1.31
PSEN1-209ENST00000553855 COL10A1Q03692 680 aa6.88□□□□□ -1.31
PSEN1-209ENST00000553855 SCN1BQ07699 218 aa6.88□□□□□ -1.31
PSEN1-209ENST00000553855 ACSM1Q08AH1 577 aa6.88□□□□□ -1.31
PSEN1-209ENST00000553855 BAMBIQ13145 260 aa6.88□□□□□ -1.31
PSEN1-209ENST00000553855 GPR176Q14439 515 aa6.88□□□□□ -1.31
PSEN1-209ENST00000553855 TRAM1Q15629 374 aa6.88□□□□□ -1.31
PSEN1-209ENST00000553855 C4orf46Q504U0 113 aa6.88□□□□□ -1.31
PSEN1-209ENST00000553855 DDI2Q5TDH0 399 aa6.88□□□□□ -1.31
PSEN1-209ENST00000553855 NCR3LG1Q68D85 454 aa6.88□□□□□ -1.31
PSEN1-209ENST00000553855 XAF1Q6GPH4 301 aa6.88□□□□□ -1.31
PSEN1-209ENST00000553855 DUX4L9Q6RFH8 374 aaPredicted RBP6.88□□□□□ -1.31
PSEN1-209ENST00000553855 JAGN1Q8N5M9 183 aa6.88□□□□□ -1.31
PSEN1-209ENST00000553855 CD177Q8N6Q3 437 aa6.88□□□□□ -1.31
PSEN1-209ENST00000553855 C8orf46Q8TAG6 207 aa6.88□□□□□ -1.31
PSEN1-209ENST00000553855 RPS4Y2Q8TD47 263 aa6.88□□□□□ -1.31
PSEN1-209ENST00000553855 C22orf15Q8WYQ4 148 aa6.88□□□□□ -1.31
PSEN1-209ENST00000553855 LHX4Q969G2 390 aa6.88□□□□□ -1.31
PSEN1-209ENST00000553855 SNX22Q96L94 193 aa6.88□□□□□ -1.31
PSEN1-209ENST00000553855 SLC6A7Q99884 636 aa6.88□□□□□ -1.31
PSEN1-209ENST00000553855 METTL8Q9H825 291 aaKnown RBP6.88□□□□□ -1.31
PSEN1-209ENST00000553855 HMG20AQ9NP66 347 aa6.88□□□□□ -1.31
PSEN1-209ENST00000553855 RBFOX1Q9NWB1 397 aaKnown RBP6.88□□□□□ -1.31
PSEN1-209ENST00000553855 FKBP14Q9NWM8 211 aa6.88□□□□□ -1.31
PSEN1-209ENST00000553855 DUX4Q9UBX2 424 aa6.88□□□□□ -1.31
PSEN1-209ENST00000553855 ZNF69Q9UC07 566 aa6.88□□□□□ -1.31
PSEN1-209ENST00000553855 ZNF222Q9UK12 451 aa6.88□□□□□ -1.31
PSEN1-209ENST00000553855 MAB21L2Q9Y586 359 aa6.88□□□□□ -1.31
PSEN1-209ENST00000553855 NIPBLQ6KC79 2804 aaeCLIP6.88□□□□□ -1.31
PSEN1-209ENST00000553855 SONP18583 2426 aaKnown RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms