RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 MNDAP41218 407 aa7.02□□□□□ -1.29
PRKCH-208ENST00000553846 NUDT2P50583 147 aa7.02□□□□□ -1.29
PRKCH-208ENST00000553846 GPR50Q13585 617 aa7.02□□□□□ -1.29
PRKCH-208ENST00000553846 C17orf58Q2M2W7 97 aa7.02□□□□□ -1.29
PRKCH-208ENST00000553846 CXorf66Q5JRM2 361 aaPredicted RBP7.02□□□□□ -1.29
PRKCH-208ENST00000553846 GLYATQ6IB77 296 aa7.02□□□□□ -1.29
PRKCH-208ENST00000553846 DEGS2Q6QHC5 323 aa7.02□□□□□ -1.29
PRKCH-208ENST00000553846 LHFPL2Q6ZUX7 228 aa7.02□□□□□ -1.29
PRKCH-208ENST00000553846 ASRGL1Q7L266 308 aa7.02□□□□□ -1.29
PRKCH-208ENST00000553846 ZNF429Q86V71 674 aa7.02□□□□□ -1.29
PRKCH-208ENST00000553846 TGIF2LXQ8IUE1 241 aa7.02□□□□□ -1.29
PRKCH-208ENST00000553846 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.02□□□□□ -1.29
PRKCH-208ENST00000553846 FOXRED2Q8IWF2 684 aa7.02□□□□□ -1.29
PRKCH-208ENST00000553846 Q8N9W7 124 aa7.02□□□□□ -1.29
PRKCH-208ENST00000553846 OR11H1Q8NG94 326 aa7.02□□□□□ -1.29
PRKCH-208ENST00000553846 RP9Q8TA86 221 aaKnown RBP7.02□□□□□ -1.29
PRKCH-208ENST00000553846 RNFT2Q96EX2 444 aa7.02□□□□□ -1.29
PRKCH-208ENST00000553846 DGCR6LQ9BY27 220 aa7.02□□□□□ -1.29
PRKCH-208ENST00000553846 CADM1Q9BY67 442 aaKnown RBP7.02□□□□□ -1.29
PRKCH-208ENST00000553846 LINC00574Q9H8X3 128 aa7.02□□□□□ -1.29
PRKCH-208ENST00000553846 GNB4Q9HAV0 340 aa7.02□□□□□ -1.29
PRKCH-208ENST00000553846 PCDHB16Q9NRJ7 776 aa7.02□□□□□ -1.29
PRKCH-208ENST00000553846 PLSCR3Q9NRY6 295 aa7.02□□□□□ -1.29
PRKCH-208ENST00000553846 SLC7A11Q9UPY5 501 aa7.02□□□□□ -1.29
PRKCH-208ENST00000553846 V9GYQ6 96 aa7.02□□□□□ -1.29
PRKCH-208ENST00000553846 DNAH2Q9P225 4427 aa7.01□□□□□ -1.29
PRKCH-208ENST00000553846 TMEM269A0A1B0GVZ9 245 aa7.01□□□□□ -1.29
PRKCH-208ENST00000553846 RIIAD1A6NNX1 92 aa7.01□□□□□ -1.29
PRKCH-208ENST00000553846 IFNGP01579 166 aa7.01□□□□□ -1.29
PRKCH-208ENST00000553846 COX4I1P13073 169 aa7.01□□□□□ -1.29
PRKCH-208ENST00000553846 TMEM11P17152 192 aa7.01□□□□□ -1.29
PRKCH-208ENST00000553846 MYF6P23409 242 aa7.01□□□□□ -1.29
PRKCH-208ENST00000553846 MAGEA2P43356 314 aa7.01□□□□□ -1.29
PRKCH-208ENST00000553846 GLIPR1P48060 266 aa7.01□□□□□ -1.29
PRKCH-208ENST00000553846 NPBWR2P48146 333 aa7.01□□□□□ -1.29
PRKCH-208ENST00000553846 GNB1P62873 340 aa7.01□□□□□ -1.29
PRKCH-208ENST00000553846 SF3A3Q12874 501 aaKnown RBP eCLIP7.01□□□□□ -1.29
PRKCH-208ENST00000553846 FAM27D1Q5T7N8 215 aa7.01□□□□□ -1.29
PRKCH-208ENST00000553846 CD300LDQ6UXZ3 194 aa7.01□□□□□ -1.29
PRKCH-208ENST00000553846 IQCF1Q8N6M8 205 aa7.01□□□□□ -1.29
PRKCH-208ENST00000553846 THEM6Q8WUY1 208 aa7.01□□□□□ -1.29
PRKCH-208ENST00000553846 DYDC1Q8WWB3 177 aa7.01□□□□□ -1.29
PRKCH-208ENST00000553846 LINC00476Q8WZB0 136 aa7.01□□□□□ -1.29
PRKCH-208ENST00000553846 TOMM40LQ969M1 308 aa7.01□□□□□ -1.29
PRKCH-208ENST00000553846 SLAMF9Q96A28 289 aa7.01□□□□□ -1.29
PRKCH-208ENST00000553846 COQ2Q96H96 371 aa7.01□□□□□ -1.29
PRKCH-208ENST00000553846 KIRREL1Q96J84 757 aa7.01□□□□□ -1.29
PRKCH-208ENST00000553846 HSPB9Q9BQS6 159 aa7.01□□□□□ -1.29
PRKCH-208ENST00000553846 GAL3ST2Q9H3Q3 398 aa7.01□□□□□ -1.29
PRKCH-208ENST00000553846 LIN7CQ9NUP9 197 aaKnown RBP7.01□□□□□ -1.29
PRKCH-208ENST00000553846 RBFOX1Q9NWB1 397 aaKnown RBP7.01□□□□□ -1.29
PRKCH-208ENST00000553846 TRBV2A0A0J9YWF9 115 aa7□□□□□ -1.29
PRKCH-208ENST00000553846 ODAMA1E959 279 aa7□□□□□ -1.29
PRKCH-208ENST00000553846 MAGEA13PA6NCF6 341 aa7□□□□□ -1.29
PRKCH-208ENST00000553846 A6NIN4 97 aa7□□□□□ -1.29
PRKCH-208ENST00000553846 PRODHO43272 600 aa7□□□□□ -1.29
PRKCH-208ENST00000553846 E2F6O75461 281 aa7□□□□□ -1.29
PRKCH-208ENST00000553846 KRT36O76013 467 aa7□□□□□ -1.29
PRKCH-208ENST00000553846 IGKV1D-33P01593 117 aa7□□□□□ -1.29
PRKCH-208ENST00000553846 IGKV1-33P01594 117 aa7□□□□□ -1.29
PRKCH-208ENST00000553846 IGF1P05019 195 aa7□□□□□ -1.29
PRKCH-208ENST00000553846 FABP3P05413 133 aa7□□□□□ -1.29
PRKCH-208ENST00000553846 CSN2P05814 226 aa7□□□□□ -1.29
PRKCH-208ENST00000553846 OR8U8P0C7N1 319 aa7□□□□□ -1.29
PRKCH-208ENST00000553846 GABRR1P24046 479 aa7□□□□□ -1.29
PRKCH-208ENST00000553846 DUSP1P28562 367 aa7□□□□□ -1.29
PRKCH-208ENST00000553846 MTNR1BP49286 362 aa7□□□□□ -1.29
PRKCH-208ENST00000553846 HCCSP53701 268 aa7□□□□□ -1.29
PRKCH-208ENST00000553846 UBE2V2Q15819 145 aa7□□□□□ -1.29
PRKCH-208ENST00000553846 SAMD4BQ5PRF9 694 aaKnown RBP7□□□□□ -1.29
PRKCH-208ENST00000553846 FAM53AQ6NSI3 398 aaPredicted RBP7□□□□□ -1.29
PRKCH-208ENST00000553846 LYPD6Q86Y78 171 aa7□□□□□ -1.29
PRKCH-208ENST00000553846 IZUMO1Q8IYV9 350 aa7□□□□□ -1.29
PRKCH-208ENST00000553846 OR8H3Q8N146 312 aa7□□□□□ -1.29
PRKCH-208ENST00000553846 AQP11Q8NBQ7 271 aa7□□□□□ -1.29
PRKCH-208ENST00000553846 TMEM104Q8NE00 496 aa7□□□□□ -1.29
PRKCH-208ENST00000553846 BBS1Q8NFJ9 593 aa7□□□□□ -1.29
PRKCH-208ENST00000553846 OR9G1Q8NH87 305 aa7□□□□□ -1.29
PRKCH-208ENST00000553846 DCUN1D4Q92564 292 aa7□□□□□ -1.29
PRKCH-208ENST00000553846 RPEQ96AT9 228 aa7□□□□□ -1.29
PRKCH-208ENST00000553846 KLK15Q9H2R5 256 aa7□□□□□ -1.29
PRKCH-208ENST00000553846 TPSG1Q9NRR2 321 aa7□□□□□ -1.29
PRKCH-208ENST00000553846 KIAA1456Q9P272 454 aa7□□□□□ -1.29
PRKCH-208ENST00000553846 COPS3Q9UNS2 423 aa7□□□□□ -1.29
PRKCH-208ENST00000553846 TRGV10A0A0A0MS01 117 aa6.99□□□□□ -1.29
PRKCH-208ENST00000553846 CCDC182A6NF36 153 aa6.99□□□□□ -1.29
PRKCH-208ENST00000553846 J3QR06 171 aa6.99□□□□□ -1.29
PRKCH-208ENST00000553846 NDUFAB1O14561 156 aa6.99□□□□□ -1.29
PRKCH-208ENST00000553846 GSC2O15499 205 aa6.99□□□□□ -1.29
PRKCH-208ENST00000553846 PPIFP30405 207 aaKnown RBP6.99□□□□□ -1.29
PRKCH-208ENST00000553846 PTGFRP43088 359 aa6.99□□□□□ -1.29
PRKCH-208ENST00000553846 CDC42P60953 191 aa6.99□□□□□ -1.29
PRKCH-208ENST00000553846 PSME3P61289 254 aa6.99□□□□□ -1.29
PRKCH-208ENST00000553846 ZNF616Q08AN1 781 aa6.99□□□□□ -1.29
PRKCH-208ENST00000553846 HNF4GQ14541 408 aa6.99□□□□□ -1.29
PRKCH-208ENST00000553846 HAGHQ16775 308 aa6.99□□□□□ -1.29
PRKCH-208ENST00000553846 SPIN3Q5JUX0 258 aa6.99□□□□□ -1.29
PRKCH-208ENST00000553846 ACSM6Q6P461 480 aa6.99□□□□□ -1.29
PRKCH-208ENST00000553846 SLC25A26Q70HW3 274 aa6.99□□□□□ -1.29
PRKCH-208ENST00000553846 TRAPPC6BQ86SZ2 158 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms