RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 DCAF10Q5QP82 559 aa10.67□□□□□ -0.7
SHMT2-207ENST00000553837 M1APQ8TC57 530 aa10.67□□□□□ -0.7
SHMT2-207ENST00000553837 EMG1Q92979 244 aaKnown RBP10.67□□□□□ -0.7
SHMT2-207ENST00000553837 NICN1Q9BSH3 213 aa10.67□□□□□ -0.7
SHMT2-207ENST00000553837 NELFAQ9H3P2 528 aa10.67□□□□□ -0.7
SHMT2-207ENST00000553837 WDR54Q9H977 334 aa10.67□□□□□ -0.7
SHMT2-207ENST00000553837 POLR1DQ9Y2S0 133 aa10.67□□□□□ -0.7
SHMT2-207ENST00000553837 PTRH2Q9Y3E5 179 aaKnown RBP10.67□□□□□ -0.7
SHMT2-207ENST00000553837 HS3ST3B1Q9Y662 390 aa10.67□□□□□ -0.7
SHMT2-207ENST00000553837 NCOA6Q14686 2063 aaPredicted RBP10.67□□□□□ -0.7
SHMT2-207ENST00000553837 A0A0A6YYD4 124 aa10.67□□□□□ -0.7
SHMT2-207ENST00000553837 ZNF878C9JN71 531 aa10.67□□□□□ -0.7
SHMT2-207ENST00000553837 M0QZK8 103 aa10.67□□□□□ -0.7
SHMT2-207ENST00000553837 ITGB1BP1O14713 200 aa10.67□□□□□ -0.7
SHMT2-207ENST00000553837 IFNA21P01568 189 aa10.67□□□□□ -0.7
SHMT2-207ENST00000553837 ZNF43P17038 809 aa10.67□□□□□ -0.7
SHMT2-207ENST00000553837 CLDN17P56750 224 aa10.67□□□□□ -0.7
SHMT2-207ENST00000553837 RSPO4Q2I0M5 234 aaPredicted RBP10.67□□□□□ -0.7
SHMT2-207ENST00000553837 HIKESHIQ53FT3 197 aa10.67□□□□□ -0.7
SHMT2-207ENST00000553837 ZNF468Q5VIY5 522 aaPredicted RBP10.67□□□□□ -0.7
SHMT2-207ENST00000553837 SLC22A25Q6T423 547 aa10.67□□□□□ -0.7
SHMT2-207ENST00000553837 MRPL52Q86TS9 123 aaKnown RBP10.67□□□□□ -0.7
SHMT2-207ENST00000553837 LHFPL1Q86WI0 220 aa10.67□□□□□ -0.7
SHMT2-207ENST00000553837 TMEM104Q8NE00 496 aa10.67□□□□□ -0.7
SHMT2-207ENST00000553837 FNDC9Q8TBE3 224 aa10.67□□□□□ -0.7
SHMT2-207ENST00000553837 Q8WTZ3 238 aa10.67□□□□□ -0.7
SHMT2-207ENST00000553837 C1orf147Q96MC9 270 aaPredicted RBP10.67□□□□□ -0.7
SHMT2-207ENST00000553837 TMEM208Q9BTX3 173 aa10.67□□□□□ -0.7
SHMT2-207ENST00000553837 GPR84Q9NQS5 396 aa10.67□□□□□ -0.7
SHMT2-207ENST00000553837 RTTNQ86VV8 2226 aa10.67□□□□□ -0.7
SHMT2-207ENST00000553837 CCDC163A0A0D9SF12 145 aa10.66□□□□□ -0.7
SHMT2-207ENST00000553837 ZNF727A8MUV8 499 aa10.66□□□□□ -0.7
SHMT2-207ENST00000553837 TMEM14DPA8MWL7 114 aa10.66□□□□□ -0.7
SHMT2-207ENST00000553837 H3BQ15 152 aa10.66□□□□□ -0.7
SHMT2-207ENST00000553837 NTN3O00634 580 aaPredicted RBP10.66□□□□□ -0.7
SHMT2-207ENST00000553837 ZIC3O60481 467 aa10.66□□□□□ -0.7
SHMT2-207ENST00000553837 CXCL1P09341 107 aa10.66□□□□□ -0.7
SHMT2-207ENST00000553837 FABP4P15090 132 aa10.66□□□□□ -0.7
SHMT2-207ENST00000553837 CD200P41217 278 aa10.66□□□□□ -0.7
SHMT2-207ENST00000553837 P2RY1P47900 373 aa10.66□□□□□ -0.7
SHMT2-207ENST00000553837 FHITP49789 147 aa10.66□□□□□ -0.7
SHMT2-207ENST00000553837 UBE2KP61086 200 aa10.66□□□□□ -0.7
SHMT2-207ENST00000553837 MRPS11P82912 194 aaKnown RBP10.66□□□□□ -0.7
SHMT2-207ENST00000553837 H3F3AP84243 136 aa10.66□□□□□ -0.7
SHMT2-207ENST00000553837 IL11RAQ14626 422 aa10.66□□□□□ -0.7
SHMT2-207ENST00000553837 AKR1C8PQ5T2L2 129 aa10.66□□□□□ -0.7
SHMT2-207ENST00000553837 ABHD12BQ7Z5M8 362 aaPredicted RBP10.66□□□□□ -0.7
SHMT2-207ENST00000553837 WDR5BQ86VZ2 330 aa10.66□□□□□ -0.7
SHMT2-207ENST00000553837 MAML2Q8IZL2 1156 aaPredicted RBP10.66□□□□□ -0.7
SHMT2-207ENST00000553837 OR10AD1Q8NGE0 317 aa10.66□□□□□ -0.7
SHMT2-207ENST00000553837 OR2AJ1Q8NGZ0 328 aa10.66□□□□□ -0.7
SHMT2-207ENST00000553837 OR13G1Q8NGZ3 307 aa10.66□□□□□ -0.7
SHMT2-207ENST00000553837 UCN2Q96RP3 112 aa10.66□□□□□ -0.7
SHMT2-207ENST00000553837 DDA1Q9BW61 102 aa10.66□□□□□ -0.7
SHMT2-207ENST00000553837 ZNF700Q9H0M5 742 aa10.66□□□□□ -0.7
SHMT2-207ENST00000553837 C14orf166Q9Y224 244 aaKnown RBP10.66□□□□□ -0.7
SHMT2-207ENST00000553837 OSGIN2Q9Y236 505 aa10.66□□□□□ -0.7
SHMT2-207ENST00000553837 MRPS18CQ9Y3D5 142 aaKnown RBP10.66□□□□□ -0.7
SHMT2-207ENST00000553837 LSM5Q9Y4Y9 91 aaKnown RBP10.66□□□□□ -0.7
SHMT2-207ENST00000553837 A0A1W2PP11 408 aa10.66□□□□□ -0.7
SHMT2-207ENST00000553837 PRSS47A8MTI9 375 aa10.66□□□□□ -0.7
SHMT2-207ENST00000553837 E5RGE8 158 aa10.66□□□□□ -0.7
SHMT2-207ENST00000553837 CYTIPO60759 359 aa10.66□□□□□ -0.7
SHMT2-207ENST00000553837 GGCTO75223 188 aaKnown RBP10.66□□□□□ -0.7
SHMT2-207ENST00000553837 HIST1H1DP16402 221 aaKnown RBP10.66□□□□□ -0.7
SHMT2-207ENST00000553837 AMY2BP19961 511 aa10.66□□□□□ -0.7
SHMT2-207ENST00000553837 ZFP36L1Q07352 338 aaKnown RBP10.66□□□□□ -0.7
SHMT2-207ENST00000553837 SLC10A1Q14973 349 aa10.66□□□□□ -0.7
SHMT2-207ENST00000553837 KCNMB1Q16558 191 aa10.66□□□□□ -0.7
SHMT2-207ENST00000553837 PDZD11Q5EBL8 140 aa10.66□□□□□ -0.7
SHMT2-207ENST00000553837 GFI1BQ5VTD9 330 aa10.66□□□□□ -0.7
SHMT2-207ENST00000553837 AADACL3Q5VUY0 350 aa10.66□□□□□ -0.7
SHMT2-207ENST00000553837 OR2T2Q6IF00 324 aa10.66□□□□□ -0.7
SHMT2-207ENST00000553837 OR5D14Q8NGL3 314 aa10.66□□□□□ -0.7
SHMT2-207ENST00000553837 ERGIC1Q969X5 290 aa10.66□□□□□ -0.7
SHMT2-207ENST00000553837 RAB39BQ96DA2 213 aa10.66□□□□□ -0.7
SHMT2-207ENST00000553837 FAM71F1Q96KD3 344 aaPredicted RBP10.66□□□□□ -0.7
SHMT2-207ENST00000553837 GAL3ST2Q9H3Q3 398 aa10.66□□□□□ -0.7
SHMT2-207ENST00000553837 SH2D2AQ9NP31 389 aa10.66□□□□□ -0.7
SHMT2-207ENST00000553837 NSG2Q9Y328 171 aa10.66□□□□□ -0.7
SHMT2-207ENST00000553837 IGKV1-9A0A0C4DH69 117 aa10.65□□□□□ -0.7
SHMT2-207ENST00000553837 SMCO3A2RU48 225 aa10.65□□□□□ -0.7
SHMT2-207ENST00000553837 M0R143 59 aa10.65□□□□□ -0.7
SHMT2-207ENST00000553837 TP53I11O14683 189 aa10.65□□□□□ -0.7
SHMT2-207ENST00000553837 CYB5BO43169 146 aa10.65□□□□□ -0.7
SHMT2-207ENST00000553837 SNRPCP09234 159 aaKnown RBP10.65□□□□□ -0.7
SHMT2-207ENST00000553837 ZNF93P35789 620 aaPredicted RBP10.65□□□□□ -0.7
SHMT2-207ENST00000553837 OR3A4PP47883 348 aa10.65□□□□□ -0.7
SHMT2-207ENST00000553837 TAS2R46P59540 309 aa10.65□□□□□ -0.7
SHMT2-207ENST00000553837 FAM189A2Q15884 450 aa10.65□□□□□ -0.7
SHMT2-207ENST00000553837 GPR157Q5UAW9 335 aa10.65□□□□□ -0.7
SHMT2-207ENST00000553837 CRIP3Q6Q6R5 217 aa10.65□□□□□ -0.7
SHMT2-207ENST00000553837 FAM57BQ71RH2 274 aa10.65□□□□□ -0.7
SHMT2-207ENST00000553837 UBALD2Q8IYN6 164 aa10.65□□□□□ -0.7
SHMT2-207ENST00000553837 PACRGQ96M98 296 aaPredicted RBP10.65□□□□□ -0.7
SHMT2-207ENST00000553837 ANGPTL4Q9BY76 406 aa10.65□□□□□ -0.7
SHMT2-207ENST00000553837 LOC102725191A0A1B0GVB3 256 aa10.65□□□□□ -0.71
SHMT2-207ENST00000553837 RBFOX3A6NFN3 312 aa10.65□□□□□ -0.71
SHMT2-207ENST00000553837 EREGO14944 169 aa10.65□□□□□ -0.71
SHMT2-207ENST00000553837 HSPA12AO43301 675 aa10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms